Literature DB >> 32966743

In Vivo Feedback Control of an Antithetic Molecular-Titration Motif in Escherichia coli Using Microfluidics.

Barbara Shannon1,2, Criseida G Zamora-Chimal3,2, Lorena Postiglione3, Davide Salzano4, Claire S Grierson5,2, Lucia Marucci3,2, Nigel J Savery1,2, Mario di Bernardo3,4,2.   

Abstract

We study both in silico and in vivo the real-time feedback control of a molecular titration motif that has been earmarked as a fundamental component of antithetic and multicellular feedback control schemes in E. coli. We show that an external feedback control strategy can successfully regulate the average fluorescence output of a bacterial cell population to a desired constant level in real-time. We also provide in silico evidence that the same strategy can be used to track a time-varying reference signal where the set-point is switched to a different value halfway through the experiment. We use the experimental data to refine and parametrize an in silico model of the motif that can be used as an error computation module in future embedded or multicellular control experiments.

Entities:  

Keywords:  external control loop; in vivo feedback control; microfluidics; synthetic biology

Mesh:

Substances:

Year:  2020        PMID: 32966743     DOI: 10.1021/acssynbio.0c00105

Source DB:  PubMed          Journal:  ACS Synth Biol        ISSN: 2161-5063            Impact factor:   5.110


  3 in total

1.  Control-Based Continuation: A New Approach to Prototype Synthetic Gene Networks.

Authors:  Irene de Cesare; Davide Salzano; Mario di Bernardo; Ludovic Renson; Lucia Marucci
Journal:  ACS Synth Biol       Date:  2022-06-21       Impact factor: 5.249

2.  ChipSeg: An Automatic Tool to Segment Bacterial and Mammalian Cells Cultured in Microfluidic Devices.

Authors:  Irene de Cesare; Criseida G Zamora-Chimal; Lorena Postiglione; Mahmoud Khazim; Elisa Pedone; Barbara Shannon; Gianfranco Fiore; Giansimone Perrino; Sara Napolitano; Diego di Bernardo; Nigel J Savery; Claire Grierson; Mario di Bernardo; Lucia Marucci
Journal:  ACS Omega       Date:  2021-01-19

3.  Ratiometric control of cell phenotypes in monostrain microbial consortia.

Authors:  Davide Salzano; Davide Fiore; Mario di Bernardo
Journal:  J R Soc Interface       Date:  2022-07-13       Impact factor: 4.293

  3 in total

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