| Literature DB >> 32963488 |
Juha Pykälä1, Annina Kantelinen2, Leena Myllys2.
Abstract
Species of Verrucaria, characterised by large spores (at least some spores exceeding 25 µm in length), perithecia leaving pits in the rock and a pale thin thallus, form a taxonomically-difficult and poorly-known group. In this study, such species occurring in Finland are revised, based on ITS sequences and morphology. Maximum likelihood analysis of ITS sequence data was used to examine if the species belong to the Thelidium group, as suggested by BLAST search. Twelve species are accepted in Finland: Verrucaria bifurcata sp. nov., V. cavernarum sp. nov., V. devergens, V. difficilis sp. nov., V. foveolata, V. fuscozonata sp. nov., V. karelica, V. kuusamoensis sp. nov., V. subdevergens sp. nov., V. subjunctiva, V. subtilis and V. vacillans sp. nov. Verrucaria foveolata is nested in V. subjunctiva in the phylogeny, but due to morphological and ecogeographical differences, the two taxa are treated as separate species pending further studies. Based on the analysis, the study species belong to the Thelidium group. The studied species show a rather high infraspecific morphological, but a low genetic variation. Furthermore, they show considerable overlap in their morphology and many specimens cannot be reliably identified, based on morphology only. All species are restricted to calcareous rocks. Verrucaria alpigena, V. cinereorufa and V. hochstetteri are excluded from the lichen flora of Finland. Verrucaria grossa is considered a species with unresolved identity. Verrucaria foveolata and V. subtilis are rather common on calcareous rocks of Finland while V. devergens and V. kuusamoensis are restricted to northern Finland. Verrucaria subjunctiva occurs mainly in northern Finland. Verrucaria bifurcata has been found only from southern Finland. Verrucaria difficilis has few localities both in SW and NE Finland. Verrucaria vacillans is restricted to calcareous rocks (dolomite) on the mountains of the NW corner of Finland. Verrucaria fuscozonata, V. karelica and V. subdevergens occur only in the Oulanka area in NE Finland. A lectotype is designated for V. subjunctiva. The morphology of the Finnish species was compared with 51 European species of Verrucaria presumably belonging to the Thelidium group. Juha Pykälä, Annina Kantelinen, Leena Myllys.Entities:
Keywords: Ascomycota ; DNA barcoding; Europe; ITS; calcareous rocks; lichenised fungi; taxonomic revision
Year: 2020 PMID: 32963488 PMCID: PMC7481264 DOI: 10.3897/mycokeys.72.56223
Source DB: PubMed Journal: MycoKeys ISSN: 1314-4049 Impact factor: 2.984
Specimens used in the phylogenetic analyses. New sequences are in bold.
| Species | Country | Voucher | GenBank accession numbers |
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| Sweden | Tibell 23641 (UPS) |
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| Sweden | Savić 3021 (UPS) |
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| Sweden | Nordin 5466 (UPS) |
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| Sweden | Palice 7666 (hb. Palice) |
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| Sweden | Savić 3163 (UPS) |
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| Sweden | Savić 3154 (UPS) |
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| Sweden | Savić 3015 (UPS) |
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| Sweden | Savić 3003 (UPS) |
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| Sweden | Tibell 23959 (UPS) |
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| UK | Orange 16318 (NMW) |
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| Sweden | Tibell 23649 (UPS) |
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| Sweden | Tibell 23525 (UPS) |
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| UK | Orange 16278 (NMW) |
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| UK | Orange 16309 (NMW) |
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| UK | Orange 15898 (NMW) |
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| UK | Orange 16103 (NMW) |
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| Sweden | Orange 16377 (NMW) |
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| Canada | McMullin (OAC) |
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| Sweden | Savić 3063 (UPS) |
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| Switzerland | Thues W1135 |
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| Switzerland | Thues W1097 |
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Figure 1.Phylogenetic relationships of with large spores, perithecia leaving pits in the rock and pale thin thallus belonging to the group. A Maximum Likelihood phylogram obtained from the RAxML analysis is based on the ITS dataset. Bootstrap values (> 50%) are shown at nodes. The node leading to the ingroup is shortened and is in reality three times longer.
Figure 2.Habitus of the new species A (holotype) B (holotype) C (holotype) D (holotype) E (holotype) F (holotype) G (holotype). Scale bars: 1 mm (A–D), 0.5 mm (E–G).
Minimum infraspecific sequence similarity of the ITS region of the species. n = number of studied specimens.
| n | Minimum sequence similarity | |
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| 4 | 99.6% |
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| 3 | 99.5% |
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| 16 | 98.9% |
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| 4 | 100% |
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| 12 | 98.5% |
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| 4 | 99.1% |
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| 18 | 99.8% |
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| 3 | 100% |
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| 18 | 98.7% |
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| 26 | 98.7% |
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| 10 | 98.6% |
Figure 3.Schematic drawings of sections of perithecia of the study species A involucrellum apical B involucrellum covering half of the exciple C involucrellum reaching the exciple base level D involucrellum enveloping the exciple.
The main perithecium characters of the study species. Per = Perithecia size (mm), Inv = Involucrellum: ab = absent, ap = apical, ce = covering half of the exciple, bl = to the exciple base level, ee = enveloping the exciple, Invthick = Involucrellum thickness (mm), Exc = Exciple size in diameter (mm), Spores = Ascospore size (mm), minimum, mean and maximum values.
| Species |
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| 0.13–0.26 | 0–60 | 0.18–0.27 | 21–26–30 × 9–11–13 | |
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| 0.15–0.28 | 30–60 | 0.16–0.32 | 23–28–34 × 10–12–14 | |
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| 0.13–0.40 | 0–80 | 0.20–0.35 | 20–27–35 × 10–13–16 | |
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| 0.18–0.36 | 40–70 | 0.16–0.28 | 23–27–34 × 10–11–13 | |
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| 0.11–0.42 | 0–60 | 0.19–0.42 | 24–30–37 × 10–13–17 | |
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| 0.11–0.26 |
| 50–60 | 0.18–0.25 | 21–26–29 × 10–12–13 |
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| 0.07–0.37 | 50–70 | 0.21–0.28 | 23–28–31 × 10–12–14 | |
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| 0.17–0.45 | 30–80 | 0.19–0.29 | 21–28–34 × 9–12–14 | |
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| 0.21–0.42 | 30–80 | 0.21–0.34 | 23–28–35 × 11–13–15 | |
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| 0.16–0.45 | 40–100 | 0.20–0.36 | 23–30–40 × 12–14–17 | |
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| 0.15–0.44 | 30–80 | 0.16–0.33 | 20–25–31 × 8–10–13 | |
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| 0.15–0.47 | 30–90 | 0.15–0.26 | 18–25–32 × 8–12–15 |