Literature DB >> 32961143

Deconstructing Stepwise Fate Conversion of Human Fibroblasts to Neurons by MicroRNAs.

Kitra Cates1, Matthew J McCoy1, Ji-Sun Kwon2, Yangjian Liu3, Daniel G Abernathy4, Bo Zhang5, Shaopeng Liu5, Paul Gontarz5, Woo Kyung Kim3, Shawei Chen3, Wenjun Kong6, Joshua N Ho4, Kyle F Burbach1, Harrison W Gabel7, Samantha A Morris8, Andrew S Yoo9.   

Abstract

Cell-fate conversion generally requires reprogramming effectors to both introduce fate programs of the target cell type and erase the identity of starting cell population. Here, we reveal insights into the activity of microRNAs miR-9/9∗ and miR-124 (miR-9/9∗-124) as reprogramming agents that orchestrate direct conversion of human fibroblasts into motor neurons by first eradicating fibroblast identity and promoting uniform transition to a neuronal state in sequence. We identify KLF-family transcription factors as direct target genes for miR-9/9∗-124 and show their repression is critical for erasing fibroblast fate. Subsequent gain of neuronal identity requires upregulation of a small nuclear RNA, RN7SK, which induces accessibilities of chromatin regions and neuronal gene activation to push cells to a neuronal state. Our study defines deterministic components in the microRNA-mediated reprogramming cascade.
Copyright © 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  cell fate; chromatin regulation; direct conversion; epigenetics; microRNA; neuronal reprogramming; non-coding RNA; single-cell RNA-sequencing

Mesh:

Substances:

Year:  2020        PMID: 32961143      PMCID: PMC7796891          DOI: 10.1016/j.stem.2020.08.015

Source DB:  PubMed          Journal:  Cell Stem Cell        ISSN: 1875-9777            Impact factor:   24.633


  9 in total

1.  MiR-124 synergism with ELAVL3 enhances target gene expression to promote neuronal maturity.

Authors:  Ya-Lin Lu; Yangjian Liu; Matthew J McCoy; Andrew S Yoo
Journal:  Proc Natl Acad Sci U S A       Date:  2021-06-01       Impact factor: 11.205

2.  Recapitulation of endogenous 4R tau expression and formation of insoluble tau in directly reprogrammed human neurons.

Authors:  Lucia S Capano; Chihiro Sato; Elena Ficulle; Anan Yu; Kanta Horie; Ji-Sun Kwon; Kyle F Burbach; Nicolas R Barthélemy; Susan G Fox; Celeste M Karch; Randall J Bateman; Henry Houlden; Richard I Morimoto; David M Holtzman; Karen E Duff; Andrew S Yoo
Journal:  Cell Stem Cell       Date:  2022-06-02       Impact factor: 25.269

3.  MiR-26a-tetrahedral framework nucleic acids mediated osteogenesis of adipose-derived mesenchymal stem cells.

Authors:  Xiaoru Shao; Zhong Hu; Yuxi Zhan; Wenjuan Ma; Li Quan; Yunfeng Lin
Journal:  Cell Prolif       Date:  2022-06-05       Impact factor: 8.755

Review 4.  Induced Neurons for Disease Modeling and Repair: A Focus on Non-fibroblastic Cell Sources in Direct Reprogramming.

Authors:  Kathryn M Kim; Mentor Thaqi; Daniel A Peterson; Robert A Marr
Journal:  Front Bioeng Biotechnol       Date:  2021-03-12

Review 5.  Accelerated neuronal aging in vitro ∼melting watch ∼.

Authors:  Emi Inagaki; Sho Yoshimatsu; Hideyuki Okano
Journal:  Front Aging Neurosci       Date:  2022-08-09       Impact factor: 5.702

6.  hnRNP R negatively regulates transcription by modulating the association of P-TEFb with 7SK and BRD4.

Authors:  Changhe Ji; Chunchu Deng; Katharina Antor; Thorsten Bischler; Cornelius Schneider; Utz Fischer; Michael Sendtner; Michael Briese
Journal:  EMBO Rep       Date:  2022-07-20       Impact factor: 9.071

7.  Probing cell identity hierarchies by fate titration and collision during direct reprogramming.

Authors:  Bob A Hersbach; David S Fischer; Giacomo Masserdotti; Karolina Mojžišová; Thomas Waltzhöni; Diego Rodriguez-Terrones; Matthias Heinig; Fabian J Theis; Magdalena Götz; Stefan H Stricker
Journal:  Mol Syst Biol       Date:  2022-09       Impact factor: 13.068

Review 8.  Direct Neuronal Reprogramming: Bridging the Gap Between Basic Science and Clinical Application.

Authors:  Lakshmy Vasan; Eunjee Park; Luke Ajay David; Taylor Fleming; Carol Schuurmans
Journal:  Front Cell Dev Biol       Date:  2021-07-05

Review 9.  MicroRNA Roles in Cell Reprogramming Mechanisms.

Authors:  Emilia Pascale; Carmen Caiazza; Martina Paladino; Silvia Parisi; Fabiana Passaro; Massimiliano Caiazzo
Journal:  Cells       Date:  2022-03-10       Impact factor: 6.600

  9 in total

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