| Literature DB >> 32957916 |
Shu-Bo Zhai1, Li Zhang2, Bai-Chao Sun1, Yan Zhang1, Qing-Shan Ma1.
Abstract
BACKGROUND: Herein, a 3-year-old boy presented with hidden-onset isolated proteinuria was reported. The disease was induced by COQ8B (previously termed ADCK4) compound heterozygous variants, including c.[271C > T] and c.[737G > A], which were inherited from his father and mother, respectively. CASEEntities:
Keywords: COQ8B (ADCK4) Glomerulopathy; Child; CoQ10; Isolated proteinuria
Year: 2020 PMID: 32957916 PMCID: PMC7507654 DOI: 10.1186/s12882-020-02038-7
Source DB: PubMed Journal: BMC Nephrol ISSN: 1471-2369 Impact factor: 2.388
Fig. 1Renal histology of the patient. a Most glomeruli show no abnormality by PASM staining. b Among the 32 glomeruli, one reveals global glomerulosclerosis (white arrow heads). (PASM× 200). (Method: Light microscope: OLYMPUS, BX51. Image acquisition system: OLYMPUS, DP72.) (c) EM shows mild hyperplasia of mesangial cells and mesangial matrix. (× 10,000) (d) Proliferation and hypertrophy of mitochondria and crowded arrangement are observed on the lumen plane of renal tubules. (× 8000) (Method: Electron microscope: JEM1230, Japan JEOL Company. Camera: Model 832 digital image transmission instrument (CCD Camera), America Gatan Company)
Fig. 2Genomic analysis. WES results of the patient and his parents indicate that our patient has 2 variants in the COQ8B gene: (a) c.[271C > T], p.(Arg91Cys), exon 4, chr19:41219990, inherited from his father; (b) c.[737G > A], p.(Ser246Asn), exon 9, chr19:41209508, inherited from his mother. Mitochondrial variants are not found
Genomic analysis
| Gene | Chr | Nucleic acid(Exon) | amino acid | RS | Pathogenicity (ACMG) | Proband | Father | Mother |
|---|---|---|---|---|---|---|---|---|
| chr19:41219990 | c.[271C > T](exon 4) | p.(Arg91Cys) | rs75497 5339 | Uncertain significance: PP3a | Het | Het | Wild type | |
| chr19:41209508 | c.[737G > A](exon 9) | p.(Ser246Asn) | rs2008 41458 | Uncertain significance: PP3b | Het | Wild type | Het | |
| a(sift,Polyphen2_HDIV,Polyphen2_HVAR,PROVEAN,MutationTaster,M- CAP,REVEL,GERP,phyloP20way,phastCons20way) | ||||||||
| MAF | Not included | Not included | 0.00 | 0.00 | 0.00 | PROBABLY DAMAGING | Deleterious | |
| b(sift,Polyphen2_HDIV,Polyphen2_HVAR,MutationTaster,M-CAP,GERP,phyloP20way,phastCons20way) | ||||||||
| MAF | 0.000088 | 0.0024 | 0.0013 | 0.00 | 0.018 | PROBABLY DAMAGING | Deleterious | |
a(sift,Polyphen2_HDIV,Polyphen2_HVAR,PROVEAN,MutationTaster,M- CAP,REVEL,GERP,phyloP20way,phastCons20way)
b(sift,Polyphen2_HDIV,Polyphen2_HVAR,MutationTaster,M-CAP,GERP,phyloP20way,phastCons20way)
Fig. 3a Domain structure of ADCK4. The helical and kinase domains are depicted by colored bars in relation to encoding exon position. b Exon structure of human ADCK4 cDNA. ADCK4 contains 15 exons. c Variants of the ADCK4 gene. d Amino acid changes. e For the 2 missense variants conservation across evolution of altered amino acid residues is shown
Phenotype and genotype of CoQ8B(ADCK4) variants in children
| References | Family- individual | Nucleotide alteration | Amino acid change | Ethnic group | Phenotype | Renal histopatholgy | Treatment |
|---|---|---|---|---|---|---|---|
| Ashraf et al [ | 1–1 | c.101[G > A] (het) c.[954_956dup] (het) | p.(Trp34*) p.(Thr319dup) | European | SRNS | FSGS | PNL, tacrolimus, renal transplantation |
| 2–1 | c.[532C > T] (homo) | p.(Arg178Trp) | Arab | SRNS | GS | renal transplantation | |
| 2–2 | c.[532C > T] (homo) | p.(Arg178Trp) | Arab | SRNS | FSGS | renal transplantation | |
| 3–1 | c.[645delT] (het) c.[1430G > A] (het) | p.(Phe215Lfs*14) p.(Arg477Gln) | Algerian Algerian | SRNS | FSGS | renal transplantation | |
| 3–2 | SRNS | FSGS | renal transplantation | ||||
| 4–1 | c.[857A > G] (het) c.[1447G > T] (het) | p.(Asp286Gly) p.(Glu483*) | ND (no data) | SRNS | FSGS | CsA, renal transplantation | |
| 4–2 | SRNS | FSGS | ND | ||||
| 4–3 | SRNS | FSGS | ACEI | ||||
| 5–1 | c.[958C > T] (homo) | p.(Arg320Trp) | Tunisian | SRNS | FSGS | ACEI, renal transplantation | |
| 5–2 | SRNS | ND | No treatment | ||||
| 6–1 | c.[1027C > T] (homo) | p.(Arg343Trp) | Moroccan | SRNS | ND | ND | |
| 6–2 | SRNS | FSGS | PNL | ||||
| 7–1 | c.[1199-1200insA] (homo) | p.(His400Nfs*11) | Turkish | SRNS | FSGS | PNL, ACEI, CP-R, CoQ10 | |
| 8–1 | c.[1356-1362del] (homo) | p.(Gln452Hfs) | Indian | SRNS | FSGS | CsA, ACEI | |
| 8–2 | SRNS | FSGS | ACEI | ||||
| Li et al [ | 1–1 | c.[625C > G] (homo) | p.(Asp209His) | Chinese | Proteinuria | FSGS | CoQ10 |
| Korkmaz et al [ | 26patients From 12families | c.[293 T > G] | p.(Leu98Arg) | Turkey | SRNS | FSGS | Immunosuppressive therapy; CoQ10 |
| c.[929C > T] | p.(Pro310Leu) | Turkey | SRNS | FSGS | |||
| c.[1493-1494CC > AA] | p.(Ala498Glu) | Turkey | SRNS | FSGS | |||
| c.[1339dupG] | p.(Glu447Glyfs*10) | Turkey | SRNS | FSGS | |||
| Wang et al [ | 1–1 | c.[241G > T] (het) c.[1468C > T] (het) | p.(Glu81*) p.(Arg490Cys) | Chinese | Proteinuria | FSGS | ND |
| 2–1 | c.[448C > T] (het) c.[748G > C] (het) | p.(Arg150*) p.(Asp250His) | Chinese | SRNS | FSGS | ND | |
| 3–1 | c.[532C > T] (het) c.[748G > C] (het) | P.(Arg178Trp) p.(Asp250His) | Chinese | SRNS | Sclerosing Glomerulonep-hritis | ND | |
| 4–1 | c.[737G > A] (homo) | p.(Ser246Asn) | Chinese | SRNS | FSGS | ND | |
| 5–1 | c.[737G > A](homo) | p.(Ser246Asn) | Chinese | Proteinuria | MsPGN | ND | |
| 6–1 | c.[748G > C](homo) | p.(Asp250His) | Chinese | NS | ND | ND | |
| 7–1 | c.[748G > C] (homo) | p.(Asp250His) | Chinese | SRNS | FSGS | ND | |
| 8–1 | c.[748G > C] (het) c.[1093C > G] (het) | p.(Asp250His) p.(Gln365Glu) | Chinese | Proteinuria | FSGS | ND | |
| Feng C et al [ | 1–1 | c.[748G > C] (het) c.[532C > T] (het) | p.(Asp250His) P.(Arg178Trp) | Chinese | Proteinuria | ND | CoQ10 |
| 2–1 | c.[625C > G] (het) c.[614C > T] (het) | p.(Asp209His) p.(Ser205Asn) | Chinese | SRNS | ND | PNL, tacrolimus, CoQ10 | |
| Song X et al [ | 1–1 | c.[737G > A] (het) c.[748G > C] (het) | p.(Ser246Asn) p.(Asp250His) | Chinese | Proteinuria | FSGS+GS | PNL, tacrolimus, ACEI,CoQ10 |
| 2–1 | c.[737G > A] (homo) | p.(Ser246Asn) | Chinese | SRNS | Global abandonment | PNL, HD, PD, CoQ10 | |
| 3–1 | c.[737G > A] (homo) | p.(Ser246Asn) | Chinese | SRNS | FSGS | PNL, PD, renal transplantation | |
| 4–1 | c.[748G > C] (homo) | p.(Asp250His) | Chinese | SRNS | MsPGN | PNL, tacrolimus,MMF, CoQ10 | |
| 4–2 | c.[748G > C] (homo) | p.(Asp250His) | Chinese | SRNS | EndPGN | PNL, HD, PD, CoQ10 | |
| 5–1 | c.[748G > C] (homo) | p.(Asp250His) | Chinese | Proteinuria | FSGS+GS | ACEI,CoQ10, PD | |
| 6–1 | c.[551A > G] (het) c.[737G > A] (het) | p.(Asp184Gly) p.(Ser246Asn) | Chinese | Proteinuria | FSGS+GS | PNL, CsA, tacrolimus, RTX, CTX, PD, CoQ10 | |
| 7–1 | c.[737G > A] (homo) | p.(Ser246Asn) | Chinese | Proteinuria | FSGS | PNL, CoQ10 | |
| Park E et al [ | 1–1 | c.[449G > A] (het) c.[759C > A] (het) | p.(Arg150Gln) p.(Asn253Lys) | Korean | Proteinuria | FSGS | ND |
| 1–2 | c.[449G > A] (het) c.[759C > A] (het) | p.(Arg150Gln) p.(Asn253Lys) | Korean | Proteinuria | FSGS | ND | |
| 2–1 | c.[737G > A] (het) c.[759C > A] (het) | p.(Ser246Asn) p.(Asn253Lys) | Korean | Proteinuria | FSGS | ND | |
| 3–1 | c.[737G > A] (homo) | p.(Ser246Asn) | Korean | Proteinuria | FSGS | ND | |
| 4–1 | c.[737G > A] (het) c.[1468C > T] (het) | p.(Ser246Asn) p.(Arg490Cys) | Korean | Proteinuria | FSGS | ND | |
| 5–1 | c.[737G > A] (homo) | p.(Ser246Asn) | Korean | Proteinuria | FSGS | CoQ10 | |
| Lolin K et al [ | 1–1 | c.[649G > A] c.[748G > T] | p.(Ala217Thr) P.(Asp250Tyr) | Belgian | Proteinuria | FSGS | CoQ10 |
| Yang J et al [ | 1–1 | c.[625C > G] (het) c.[918G > T] (het) | p.(Asp209His) p.(Cys306X) | Chinese | Proteinuria | FSGS | CoQ10 |
| Atmaca M et al [ | 1–1, 1–2 | c.[1199dupA] (homo) | p.(His400Glnfs*11) | European | Proteinuria | ND | CoQ10 |
| 2–1 | c.[1199dupA] (homo) | p.(His400Glnfs*11) | European | Proteinuria | ND | CoQ10 | |
| 3–1 | c.[1199dupA] (homo) | p.(His400Glnfs*11) | European | Proteinuria | ND | CoQ10 | |
| 4–1 | c.[293 T > G] (homo) | p.(Leu98Arg) | European | Proteinuria | ND | ACEI, ARB, CoQ10 | |
| Yang Z et al [ | 1–1 | c.[748G > C] (het) c.1041G > T (het) | p.(Asp250His) p.(Cys347*) | Chinese | Proteinuria | MGA | ND |
ND No data or not do, GS Global glomerulosclerosis, het Heterozygous, homo Homozygous, PNL Prednisolone, CsA Cyclosporine A, CP-R Cyclophosphamide resistant, FSGS Focal segmental glomerulosclerosis, MsPGN Mesangial proliferative glomerulonephritis, EndPGN Endoproliferative glomerulonephritis, MGA Minor glomerular abnormalities