Literature DB >> 32955894

Characterization of Differential Tissue Abundance of Major Non-CYP Enzymes in Human.

Abdul Basit1, Naveen K Neradugomma2, Christopher Wolford2, Peter W Fan3, Bernard Murray4, Ryan H Takahashi5, S Cyrus Khojasteh5, Bill J Smith4, Scott Heyward6, Rheem A Totah7, Edward J Kelly2, Bhagwat Prasad1.   

Abstract

The availability of assays that predict the contribution of cytochrome P450 (CYP) metabolism allows for the design of new chemical entities (NCEs) with minimal oxidative metabolism. These NCEs are often substrates of non-CYP drug-metabolizing enzymes (DMEs), such as UDP-glucuronosyltransferases (UGTs), sulfotransferases (SULTs), carboxylesterases (CESs), and aldehyde oxidase (AO). Nearly 30% of clinically approved drugs are metabolized by non-CYP enzymes. However, knowledge about the differential hepatic versus extrahepatic abundance of non-CYP DMEs is limited. In this study, we detected and quantified the protein abundance of eighteen non-CYP DMEs (AO, CES1 and 2, ten UGTs, and five SULTs) across five different human tissues. AO was most abundantly expressed in the liver and to a lesser extent in the kidney; however, it was not detected in the intestine, heart, or lung. CESs were ubiquitously expressed with CES1 being predominant in the liver, while CES2 was enriched in the small intestine. Consistent with the literature, UGT1A4, UGT2B4, and UGT2B15 demonstrated liver-specific expression, whereas UGT1A10 expression was specific to the intestine. UGT1A1 and UGT1A3 were expressed in both the liver and intestine; UGT1A9 was expressed in the liver and kidney; and UGT2B17 levels were significantly higher in the intestine than in the liver. All five SULTs were detected in the liver and intestine, and SULT1A1 and 1A3 were detected in the lung. Kidney abundance was the most variable among the studied tissues, and overall, high interindividual variability (>15-fold) was observed for UGT2B17, CES2 (intestine), SULT1A1 (liver), UGT1A9, UGT2B7, and CES1 (kidney). These differential tissue abundance data can be integrated into physiologically based pharmacokinetic (PBPK) models for the prediction of non-CYP drug metabolism and toxicity in hepatic and extrahepatic tissues.

Entities:  

Keywords:  CES; LC−MS/MS proteomics; SULT; UGT; absolute quantification; aldehyde oxidase; carboxylesterase; non-CYP DME

Year:  2020        PMID: 32955894     DOI: 10.1021/acs.molpharmaceut.0c00559

Source DB:  PubMed          Journal:  Mol Pharm        ISSN: 1543-8384            Impact factor:   4.939


  10 in total

Review 1.  Data-independent acquisition (DIA): An emerging proteomics technology for analysis of drug-metabolizing enzymes and transporters.

Authors:  Jiapeng Li; Logan S Smith; Hao-Jie Zhu
Journal:  Drug Discov Today Technol       Date:  2021-07-09

Review 2.  Applications, Challenges, and Outlook for PBPK Modeling and Simulation: A Regulatory, Industrial and Academic Perspective.

Authors:  Wen Lin; Yuan Chen; Jashvant D Unadkat; Xinyuan Zhang; Di Wu; Tycho Heimbach
Journal:  Pharm Res       Date:  2022-05-13       Impact factor: 4.580

3.  Interindividual Variability and Differential Tissue Abundance of Mitochondrial Amidoxime Reducing Component Enzymes in Humans.

Authors:  Deepak Ahire; Abdul Basit; Lisa J Christopher; Ramaswamy Iyer; J Steven Leeder; Bhagwat Prasad
Journal:  Drug Metab Dispos       Date:  2021-12-23       Impact factor: 3.922

4.  Probing functional interactions between cytochromes P450 with principal component analysis of substrate saturation profiles and targeted proteomics.

Authors:  Bikash Dangi; Nadezhda Y Davydova; Marc A Maldonado; Deepak Ahire; Bhagwat Prasad; Dmitri R Davydov
Journal:  Arch Biochem Biophys       Date:  2021-05-28       Impact factor: 4.114

5.  Ultrasensitive Quantification of Drug-metabolizing Enzymes and Transporters in Small Sample Volume by Microflow LC-MS/MS.

Authors:  Deepak Suresh Ahire; Abdul Basit; Matthew Karasu; Bhagwat Prasad
Journal:  J Pharm Sci       Date:  2021-03-28       Impact factor: 3.784

6.  Tissue-Specific Proteomics Analysis of Anti-COVID-19 Nucleoside and Nucleotide Prodrug-Activating Enzymes Provides Insights into the Optimization of Prodrug Design and Pharmacotherapy Strategy.

Authors:  Jiapeng Li; Shuhan Liu; Jian Shi; Xinwen Wang; Yanling Xue; Hao-Jie Zhu
Journal:  ACS Pharmacol Transl Sci       Date:  2021-04-01

7.  Carboxylesterase Activities and Protein Expression in Rabbit and Pig Ocular Tissues.

Authors:  Anam Hammid; John K Fallon; Toni Lassila; Giulia Salluce; Philip C Smith; Ari Tolonen; Achim Sauer; Arto Urtti; Paavo Honkakoski
Journal:  Mol Pharm       Date:  2021-02-17       Impact factor: 4.939

Review 8.  The Role of Uptake and Efflux Transporters in the Disposition of Glucuronide and Sulfate Conjugates.

Authors:  Erkka Järvinen; Feng Deng; Wilma Kiander; Alli Sinokki; Heidi Kidron; Noora Sjöstedt
Journal:  Front Pharmacol       Date:  2022-01-13       Impact factor: 5.810

9.  Activation of Tenofovir Alafenamide and Sofosbuvir in the Human Lung and Its Implications in the Development of Nucleoside/Nucleotide Prodrugs for Treating SARS-CoV-2 Pulmonary Infection.

Authors:  Jiapeng Li; Shuhan Liu; Jian Shi; Hao-Jie Zhu
Journal:  Pharmaceutics       Date:  2021-10-11       Impact factor: 6.321

10.  Quantitative Investigation of Irinotecan Metabolism, Transport, and Gut Microbiome Activation.

Authors:  Md Masud Parvez; Abdul Basit; Parth B Jariwala; Zsuzsanna Gáborik; Emese Kis; Scott Heyward; Matthew R Redinbo; Bhagwat Prasad
Journal:  Drug Metab Dispos       Date:  2021-06-01       Impact factor: 3.579

  10 in total

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