Literature DB >> 32954408

Sleep health, diseases, and pain syndromes: findings from an electronic health record biobank.

Hassan S Dashti1,2,3, Brian E Cade2,4,5, Gerda Stutaite6, Richa Saxena1,2,3,5, Susan Redline4,5,7, Elizabeth W Karlson6,8.   

Abstract

STUDY
OBJECTIVES: Implementation of electronic health record biobanks has facilitated linkage between clinical and questionnaire data and enabled assessments of relationships between sleep health and diseases in phenome-wide association studies (PheWAS). In the Mass General Brigham Biobank, a large health system-based study, we aimed to systematically catalog associations between time in bed, sleep timing, and weekly variability with clinical phenotypes derived from ICD-9/10 codes.
METHODS: Self-reported habitual bed and wake times were used to derive variables: short (<7 hours) and long (≥9 hours) time in bed, sleep midpoint, social jetlag, and sleep debt. Logistic regression and Cox proportional hazards models were used to test cross-sectional and prospective associations, respectively, adjusted for age, gender, race/ethnicity, and employment status and further adjusted for body mass index.
RESULTS: In cross-sectional analysis (n = 34,651), sleep variable associations were most notable for circulatory system, mental disorders, and endocrine/metabolic phenotypes. We observed the strongest associations for short time in bed with obesity, for long time in bed and sleep midpoint with major depressive disorder, for social jetlag with hypercholesterolemia, and for sleep debt with acne. In prospective analysis (n = 24,065), we observed short time in bed associations with higher incidence of acute pain and later sleep midpoint and higher sleep debt and social jetlag associations with higher incidence of major depressive disorder.
CONCLUSIONS: Our analysis reinforced that sleep health is a multidimensional construct, corroborated robust known findings from traditional cohort studies, and supported the application of PheWAS as a promising tool for advancing sleep research. Considering the exploratory nature of PheWAS, careful interrogation of novel findings is imperative. © Sleep Research Society 2020. Published by Oxford University Press on behalf of the Sleep Research Society. All rights reserved. For permissions, please e-mail journals.permissions@oup.com.

Entities:  

Keywords:  electronic health records; epidemiology; phenome-wide association study; sleep health

Mesh:

Year:  2021        PMID: 32954408      PMCID: PMC7953212          DOI: 10.1093/sleep/zsaa189

Source DB:  PubMed          Journal:  Sleep        ISSN: 0161-8105            Impact factor:   5.849


  62 in total

Review 1.  How do sleep disturbance and chronic pain inter-relate? Insights from the longitudinal and cognitive-behavioral clinical trials literature.

Authors:  Michael T Smith; Jennifer A Haythornthwaite
Journal:  Sleep Med Rev       Date:  2004-04       Impact factor: 11.609

2.  Combining billing codes, clinical notes, and medications from electronic health records provides superior phenotyping performance.

Authors:  Wei-Qi Wei; Pedro L Teixeira; Huan Mo; Robert M Cronin; Jeremy L Warner; Joshua C Denny
Journal:  J Am Med Inform Assoc       Date:  2015-09-02       Impact factor: 4.497

3.  Sleep debt: the impact of weekday sleep deprivation on cardiovascular health in older women.

Authors:  Tomás Cabeza de Baca; Koharu Loulou Chayama; Susan Redline; Natalie Slopen; Fumika Matsushita; Aric A Prather; David R Williams; Julie E Buring; Alan M Zaslavsky; Michelle A Albert
Journal:  Sleep       Date:  2019-10-09       Impact factor: 5.849

4.  SLEEP DURATION AND DEPRESSION AMONG ADULTS: A META-ANALYSIS OF PROSPECTIVE STUDIES.

Authors:  Long Zhai; Hua Zhang; Dongfeng Zhang
Journal:  Depress Anxiety       Date:  2015-06-05       Impact factor: 6.505

5.  Trends in Self-Reported Sleep Duration among US Adults from 1985 to 2012.

Authors:  Earl S Ford; Timothy J Cunningham; Janet B Croft
Journal:  Sleep       Date:  2015-05-01       Impact factor: 5.849

6.  Cross-sectional and Prospective Associations of Actigraphy-Assessed Sleep Regularity With Metabolic Abnormalities: The Multi-Ethnic Study of Atherosclerosis.

Authors:  Tianyi Huang; Susan Redline
Journal:  Diabetes Care       Date:  2019-06-05       Impact factor: 19.112

Review 7.  Sleep duration and cancer risk: a systematic review and meta-analysis of prospective studies.

Authors:  Hao Zhao; Jie-Yun Yin; Wan-Shui Yang; Qin Qin; Ting-Ting Li; Yun Shi; Qin Deng; Sheng Wei; Li Liu; Xin Wang; Shao-Fa Nie
Journal:  Asian Pac J Cancer Prev       Date:  2013

8.  Systematic comparison of phenome-wide association study of electronic medical record data and genome-wide association study data.

Authors:  Joshua C Denny; Lisa Bastarache; Marylyn D Ritchie; Robert J Carroll; Raquel Zink; Jonathan D Mosley; Julie R Field; Jill M Pulley; Andrea H Ramirez; Erica Bowton; Melissa A Basford; David S Carrell; Peggy L Peissig; Abel N Kho; Jennifer A Pacheco; Luke V Rasmussen; David R Crosslin; Paul K Crane; Jyotishman Pathak; Suzette J Bielinski; Sarah A Pendergrass; Hua Xu; Lucia A Hindorff; Rongling Li; Teri A Manolio; Christopher G Chute; Rex L Chisholm; Eric B Larson; Gail P Jarvik; Murray H Brilliant; Catherine A McCarty; Iftikhar J Kullo; Jonathan L Haines; Dana C Crawford; Daniel R Masys; Dan M Roden
Journal:  Nat Biotechnol       Date:  2013-12       Impact factor: 54.908

9.  Mapping ICD-10 and ICD-10-CM Codes to Phecodes: Workflow Development and Initial Evaluation.

Authors:  Patrick Wu; Aliya Gifford; Xiangrui Meng; Xue Li; Harry Campbell; Tim Varley; Juan Zhao; Robert Carroll; Lisa Bastarache; Joshua C Denny; Evropi Theodoratou; Wei-Qi Wei
Journal:  JMIR Med Inform       Date:  2019-11-29

Review 10.  SleepOMICS: How Big Data Can Revolutionize Sleep Science.

Authors:  Nicola Luigi Bragazzi; Ottavia Guglielmi; Sergio Garbarino
Journal:  Int J Environ Res Public Health       Date:  2019-01-21       Impact factor: 3.390

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  7 in total

Review 1.  Using Phecodes for Research with the Electronic Health Record: From PheWAS to PheRS.

Authors:  Lisa Bastarache
Journal:  Annu Rev Biomed Data Sci       Date:  2021-07-20

2.  Sleep patterns of patients receiving home parenteral nutrition: A home-based observational study.

Authors:  Hassan S Dashti; Meghna Godbole; Angela Chen; Kris M Mogensen; Aaron Leong; David L Burns; Marion F Winkler; Richa Saxena; Charlene Compher
Journal:  JPEN J Parenter Enteral Nutr       Date:  2022-03-15       Impact factor: 3.896

3.  Interaction of obesity polygenic score with lifestyle risk factors in an electronic health record biobank.

Authors:  Hassan S Dashti; Nicole Miranda; Brian E Cade; Tianyi Huang; Susan Redline; Elizabeth W Karlson; Richa Saxena
Journal:  BMC Med       Date:  2022-01-12       Impact factor: 11.150

4.  How Accurately Can We Recall the Timing of Food Intake? A Comparison of Food Times from Recall-Based Survey Questions and Daily Food Records.

Authors:  Siena C Gioia; Mélanie Guirette; Angela Chen; Chandler Tucker; Brianna E Gray; Céline Vetter; Marta Garaulet; Frank A J L Scheer; Richa Saxena; Hassan S Dashti
Journal:  Curr Dev Nutr       Date:  2022-01-10

5.  Genetic evidence for a potential causal relationship between insomnia symptoms and suicidal behavior: a Mendelian randomization study.

Authors:  Malik Nassan; Iyas Daghlas; John W Winkelman; Hassan S Dashti; Richa Saxena
Journal:  Neuropsychopharmacology       Date:  2022-05-10       Impact factor: 8.294

6.  Scanning the medical phenome to identify new diagnoses after recovery from COVID-19 in a US cohort.

Authors:  V Eric Kerchberger; Josh F Peterson; Wei-Qi Wei
Journal:  J Am Med Inform Assoc       Date:  2022-08-25       Impact factor: 7.942

7.  Habitual Sleep Duration, Daytime Napping, and Dietary Intake: A Mendelian Randomization Study.

Authors:  Kaitlyn Alimenti; Angela Chen; Richa Saxena; Hassan S Dashti
Journal:  Curr Dev Nutr       Date:  2021-03-03
  7 in total

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