| Literature DB >> 32953722 |
Deheng Li1,2, Liangdong Li1,2, Wentao Yang2,3, Lei Chen1,2, Xin Chen1,2, Qifeng Wang2,3, Bin Hao1,2, Wei Jin2,4, Yiqun Cao1,2.
Abstract
BACKGROUND: Breast cancer (BC) is one of the most lethal malignant tumors and the leading cause of cancer-related death worldwide. Although early diagnostic techniques for BC have been well developed, 40% of cases are still diagnosed at the advanced stage, while for BC patients with distant metastases, the 5-year survival rate is usually lower than 30%. The Snail family, generally regarded as transcriptional repressors, has been indicated to be an essential prognostic factor in malignant tumors. However, limited data exist on public databases concerning the prognostic value of individual Snail family members in BC, especially SNAI3.Entities:
Keywords: Breast cancer (BC); SNAI family; mRNA; prognosis
Year: 2020 PMID: 32953722 PMCID: PMC7475426 DOI: 10.21037/atm-20-681
Source DB: PubMed Journal: Ann Transl Med ISSN: 2305-5839
Figure 1Alternation of SNAI family members. (A) Different alternation frequency of the SNAI family members in solid tumors; (B) genetic alternation of SNAI genes in BC; (C) hotspot mutation of SNAI genes; copy number (D) and mRNA expression level (E) of SNAI genes in BC subtypes based on PAM50.
Figure 2Influence of three SNAI mRNA expression patterns on distant metastasis-free survival. (A) SNAI1, (B) SNAI2, (C) SNAI3.
Figure S2Influence of three SNAI mRNA expression patterns on relapse-free survival (A,B,C) and overall survival (D,E,F). SNAI1, A and D; SNAI2, B and E; SNAI3, C and F.
Figure 3Distant metastasis-free survival analysis of diverse SNAI mRNA expression patterns in different subtypes of BC. (A,B,C,D) SNAI1, (E,F,G,H) SNAI2, (I,J,K,L) SNAI3.
KM-plot-DMFS
| Variance | SNAI1 | SNAI2 | SNAI3 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| No. of patients (n) | HR (95% CI) | P value | No. of patients (n) | HR (95% CI) | P value | No. of patients (n) | HR (95% CI) | P value | ||||||
| Low exp | High exp | Low exp | High exp | Low exp | High exp | |||||||||
| All patients | 1,191 | 555 | 1.55 (1.28–1.89) | 1.1x10–5 | 1,278 | 468 | 1.24 (1.01–1.53) | 0.042 | 439 | 225 | 0.49 (0.33–0.72) | 0.00026 | ||
| Grade | ||||||||||||||
| 1 | 105 | 83 | 2.18 (0.95–4.99) | 0.058 | 128 | 60 | 2.18 (0.95–4.98) | 0.058 | ||||||
| 2 | 371 | 175 | 1.45 (1.02–2.07) | 0.037 | 369 | 177 | 0.58 (0.39–0.87) | 0.0083 | 47 | 28 | 0.4 (0.11–1.41) | 0.14 | ||
| 3 | 141 | 317 | 1.65 (1.1–2.49) | 0.015 | 343 | 115 | 1.62 (1.11–2.35) | 0.011 | 114 | 84 | 0.58 (0.32–1.07) | 0.078 | ||
| ER status | ||||||||||||||
| ER+ | 428 | 236 | 1.99 (1.42–2.79) | 4.5x10–5 | 440 | 224 | 0.68 (0.47–0.99) | 0.042 | 95 | 66 | 0.31 (0.09–1.06) | 0.049 | ||
| ER− | 134 | 84 | 1.61 (1.02–2.56) | 0.041 | 130 | 80 | 1.96 (1.24–3.11) | 0.0036 | 18 | 50 | 0.54 (0.22–1.28) | 0.15 | ||
| PR status | ||||||||||||||
| PR+ | 125 | 67 | 3.06 (1.31–7.14) | 0.0065 | 120 | 72 | 2.76 (1.19–6.39) | 0.013 | 67 | 55 | 0.29 (0.06–1.34) | 0.091 | ||
| PR− | 81 | 73 | 2.03 (1.11–3.71) | 0.018 | 115 | 39 | 2.67 (1.47–4.83) | 0.00076 | 66 | 29 | 0.6 (0.24–1.49) | 0.26 | ||
| HER2 status | ||||||||||||||
| HER2+ | 49 | 77 | 1.9 (0.92–3.92) | 0.076 | 93 | 33 | 2.57 (1.35–4.9) | 0.003 | 47 | 19 | 0.63 (0.21–1.91) | 0.41 | ||
| HER2− | 60 | 90 | 0.73 (0.31–1.73) | 0.48 | 111 | 39 | 2.79 (1.18–6.57) | 0.014 | 25 | 57 | 0.4 (0.12–1.38) | 0.13 | ||
| Lymph node status | ||||||||||||||
| Positive | 258 | 124 | 2.06 (1.4–3.03) | 0.00018 | 268 | 114 | 1.37 (0.91–2.07) | 0.13 | 68 | 104 | 1.58 (0.81–3.06) | 0.17 | ||
| Negative | 551 | 437 | 1.45 (1.11–1.91) | 0.0064 | 639 | 349 | 0.85 (0.64–1.14) | 0.28 | 94 | 68 | 0.37 (0.14–1.01) | 0.044 | ||
| TP53 status | ||||||||||||||
| Mut | 48 | 35 | 1.52 (0.63–3.68) | 0.35 | 39 | 44 | 2.94 (1.05–8.22) | 0.032 | 16 | 40 | 0.21 (0.07–0.61) | 0.0015 | ||
| Wild | 78 | 31 | 2.81 (1.3–6.07) | 0.0062 | 26 | 83 | 0.17 (0.08–0.36) | 4.1x10–7 | ||||||
| Pietenpol subtype | ||||||||||||||
| Basal like 1 | 20 | 45 | 0.52 (0.2–1.38) | 0.18 | 45 | 20 | 2.31 (0.88–6.04) | 0.079 | 25 | 15 | 0.25 (0.03–2.05) | 0.16 | ||
| Basal like 2 | 25 | 14 | 4.57 (1.65–12.67) | 0.0014 | 10 | 29 | 0.42 (0.15–1.16) | 0.085 | 10 | 20 | 0.3 (0.1–0.9) | 0.023 | ||
| Immunomodulatory | 23 | 73 | 2.8x108 (0–Inf) | 0.012 | 23 | 73 | 2.91 (0.67–12.62) | 0.14 | 42 | 18 | 2.48 (0.62–9.94) | 0.18 | ||
| Mesenchymal | 43 | 22 | 1.6 (0.66–3.87) | 0.29 | 47 | 18 | 0.49 (0.14–1.68) | 0.25 | 22 | 15 | 0.47 (0.12–1.8) | 0.26 | ||
| Mesenchymal stem like | * | * | * | * | * | * | * | * | * | * | * | * | ||
| Luminal androgen receptor | * | * | * | * | 25 | 57 | 1.79 (0.73–4.43) | 0.2 | 10 | 35 | 0.4 (0.12–1.36) | 0.13 | ||
| Systemically untreated patients | ||||||||||||||
| Include | 304 | 239 | 1.39 (1–1.93) | 0.05 | 371 | 172 | 0.68 (0.46–0.99) | 0.043 | ||||||
| Exclude | 566 | 296 | 1.78 (1.34–2.38) | 6.9x10–5 | 631 | 231 | 1.51 (1.11–2.05) | 0.008 | 194 | 130 | 0.6 (0.35–1.03) | 0.063 | ||
| Endocrine therapy | ||||||||||||||
| Any | 1,191 | 555 | 1.55 (1.28–1.89) | 1.1x10–5 | 1,278 | 468 | 1.24 (1.01–1.53) | 0.042 | 439 | 225 | 0.49 (0.33–0.72) | 0.00026 | ||
| Include | 424 | 221 | 1.81 (1.28–2.55) | 0.00071 | 454 | 191 | 0.75 (0.5–1.12) | 0.16 | 92 | 63 | 0.34 (0.1–1.18) | 0.074 | ||
| Exclude | 428 | 334 | 1.38 (1.04–1.82) | 0.024 | 571 | 191 | 1.31 (0.96–1.79) | 0.083 | 114 | 63 | 0.7 (0.38–1.29) | 0.25 | ||
| Tamoxifen only | 416 | 213 | 1.9 (1.34–2.71) | 0.00028 | 447 | 182 | 0.75 (0.5–1.13) | 0.16 | 76 | 65 | 0.38 (0.1–1.39) | 0.13 | ||
| Chemotherapy | ||||||||||||||
| Any | ||||||||||||||
| Include | 199 | 106 | 1.6 (1–2.55) | 0.047 | 204 | 101 | 2.37 (1.49–3.78) | 0.00018 | 132 | 93 | 0.55 (0.3–1) | 0.048 | ||
| Exclude | 104 | 85 | 1.33 (0.9–1.96) | 0.15 | 779 | 321 | 0.7 (0.52–0.93) | 0.013 | 35 | 71 | 3.25 (0.73–14.54) | 0.1 | ||
| Adjuvant only | 102 | 95 | 1.68 (0.94–3.01) | 0.078 | 147 | 50 | 2.34 (1.31–4.19) | 0.0031 | 75 | 43 | 0.47 (0.19–1.18) | 0.1 | ||
| Neoadjuvant only | 80 | 28 | 1.55 (0.66–3.62) | 0.31 | 46 | 62 | 2.22 (0.88–5.62) | 0.085 | 31 | 76 | 0.56 (0.25–1.29) | 0.17 | ||
Figure 4Pathway and biological process analyses of different SNAI genes and their co-expressed genes. (A,B) SNAI1, (C,D) SNAI2, (E,F) SNAI3.