| Literature DB >> 32953406 |
A Türkyilmaz1, P Ata1, F Akbaş2, İ Yağci2.
Abstract
Spondyloarthropathies (SpAs), are a group of chronic inflammatory diseases with a number of genetic, physiopathological, clinical and radiological features. Ankylosing spondylitis (AS) is the most common type of spondylo-arthropathies, and >90.0% of patients with ankylosing spondylitis are human leukocyte antigen-B27 (HLA-B2 7)-positive. In recent years, non-HLA genetic factors have been reported to have an effect on ankylosing spondylitis. MicroRNAs (miRNAs), are endogenous non coding RNA molecules containing 18-23 nucleotides that play a role in the post-transcriptional regulation of gene expression. In this study, we aimed to determine the expression levels of miRNAs associated with T- and B-cell differentiation/stimulation in peripheral blood mononuclear cells and their relationship with the etiology of the AS in patients and healthy controls. In a molecular study, peripheral blood mononuclear cell isolation, and total RNA isolation were performed first. In the second step, cDNA synthesis and quantitative real-time PCR (qPCR) expression analysis were completed. Ultimately, in the patient and control group, the expression levels of miR-142-5p and miR-143 were found to be significantly different (p <0.05). According to current knowledge, miR-142-5p andmiR-143 expressions were found to be important for those diseases that share similar etiology with AS. We suggest that miR-142-5p and miR-143 may play a role in the pathogenesis, especially miR- 142-5p may be a potential biomarker and a target molecule for the treatment.Entities:
Keywords: Ankylosing spondylitis (AS); Expression level of microRNA (miRNA); miR-142-5p; miR-143
Year: 2020 PMID: 32953406 PMCID: PMC7474224 DOI: 10.2478/bjmg-2020-0006
Source DB: PubMed Journal: Balkan J Med Genet ISSN: 1311-0160 Impact factor: 0.519
Distribution of descriptive characteristics.
| Descriptive Characteristics ( | ||
|---|---|---|
| Age (years) | median (min-max) | 37(18-60) |
| mean±SD | 37.24±9.42 | |
| Gender | females | 58 (58.0) |
| males | 42 (42.0) | |
miRNAs analyzed in the signaling pathway targeted miScript miRNA PCR array study.
miR-423-5p, miR-93-5p, miR-98-5p | |
miR-29b-3p, miR-30b-5p, miR-30c-5p, miR-30d-5p | |
miR-23b-3p, miR-24-3p, miR-29a-3p, miR-31-5p | |
miR-222-3p, miR-223-3p, miR-29b-3p, miR-30e-5p, miR-331-3p, miR-92a-3p | |
miR-210, miR-23b-3p, miR-25-3p, miR-28-5p, miR-30d-5p, miR-93-5p, miR-98-5p | |
miR-30b-5p, miR-30c-5p, miR-34a-5p | |
miR-335-5p, miR-365a-3p, miR-99a-5p | |
miR-30a-5p, miR-30b-5p, miR-30e-5p, miR-342-3p, miR-368, miR-574-3p, miR-98-5p |
Comparison of expression levels of miRNA in the patient and control groups.
| miRNA | AVG Ct | 2[-AvgΔ(Ct)] | Ratio Patient/Control | |||
|---|---|---|---|---|---|---|
| Control | Patient | Control | Patient | |||
| 26.00 | 25.04 | 0.136139 | 0.203892 | 0.025721 | 1.4977 | |
| 26.80 | 24.68 | 0.078435 | 0.26217 | 0.000003 | 3.3425 | |
Distribution of disease characteristics.
| Patient Group ( | ||
|---|---|---|
| HLA-B27 | negative positive | 23 (46.0) 27 (54.0) |
| ESR | median (min-max) mean+SD | 17 (2-59) 21.36±15.51 |
| Symptom duration (years) | median (min-max) mean+SD | 5 (1-25) 6.60±5.08 |
| BASDAI | median (min-max) mean±SD | 2.5 (0-8) 2.75±2.03 |
| BASF | median (min-max) mean+SD | 5(5-12) 5.36±1.19 |
| BASMI | median (min-max) mean+SD | 1 (0-9.8) 1.55±1.93 |
| median (min-max) mean±SD | 24.1 (21.4-30.5) 24.68±2.06 | |
| median (min-max) mean+SD | 24.2 (21.6-35.8) 25.10±3.11 | |
| Control Group ( | ||
| median (min-max) mean±SD | 26.4 (22.45-34.7) 26.88±2.88 | |
| median (min-max) mean+SD | 25.4(21.28-33.7) 26.02±2.71 |
HLA-B27: human leukocyte antigen-B27; ESR: erythrocyte sedimentation rate; BASDAI: Bath Ankylosing Spondylitis Disease Activity Index; BASFI: Bath Ankylosing Spondylitis Functional Index; BASMI: Bath Ankylosing Spondylitis Metrology Index.
Correlation between age and disease characteristics and miR-142-5p and miR-143 measurements.
| Patient Group ( | ||||
|---|---|---|---|---|
| r | p Value | r | p Value | |
| Age (years) | 0.047 | 0.746 | 0.126 | 0.384 |
| ESR | -0.070 | 0.641 | -0.081 | 0.589 |
| Symptom duration (years) | -0.184 | 0.200 | -0.172 | 0.233 |
| BASDAI | -0.268 | 0.060 | -0.266 | 0.062 |
| BASFI | -0.026 | 0.861 | -0.114 | 0.447 |
| BASMI | 0.062 | 0.671 | 0.229 | 0.110 |
ESR: erythrocyte sedimention rate; BASDAI: Bath Ankylosing Spondylitis Disease Activity Index;
BASFI: Bath Ankylosing Spondylitis Functional Index; BASMI: Bath Ankylosing Spondylitis Metrology Index.
Pearson correlation coefficient.
Spearman’s correlation coefficient.