| Literature DB >> 32953262 |
Chengcheng Tu1, Feng Tao1, Ying Qin2, Mingzhu Wu1, Ji Cheng1, Min Xie2, Bing Shen2, Junjiao Ren3, Xiaohong Xu4, Dayan Huang3, Hongbo Chen1.
Abstract
BACKGROUND: Preeclampsia remains a serious disorder that puts at risk the lives of perinatal mothers and infants worldwide. This study assessed potential pathogenic mechanisms underlying preeclampsia by investigating differentially expressed proteins (DEPs) in the serum of patients with early-onset preeclampsia (EOPE) and late-onset preeclampsia (LOPE) compared with healthy pregnant women.Entities:
Keywords: Early-onset preeclampsia; LC–MS/MS; Late-onset preeclampsia; Preeclampsia; Proteomics; iTRAQ
Year: 2020 PMID: 32953262 PMCID: PMC7473043 DOI: 10.7717/peerj.9753
Source DB: PubMed Journal: PeerJ ISSN: 2167-8359 Impact factor: 2.984
Figure 1Flowchart of the data analysis procedure.
Figure 2Removal of high-abundance proteins.
(A) Lane E is the original sample from the early-onset preeclampsia (EOPE) group. Lane M contains markers. Lanes 1–4 are from serum samples obtained from the EOPE group after removing the highly abundant proteins, whereas lanes 5–8 are from the EOPE control group after removing the highly abundant proteins. (B) Lane L is the original sample from the late-onset preeclampsia (LOPE) group. Lane M contains markers. Lanes −1 to −4 are from the LOPE group after removing the highly abundant proteins, whereas lanes −5 to −8 are from the LOPE control group after removing the high-abundance proteins. The bands are clear and uniform and without protein degradation.
List of differentially expressed proteins in the early-onset preeclampsia group.
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| MMP2 | Matrix metallopeptidase 2 | 21.48 | |
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| cDNA FLJ75401 | 12.87 | ||
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| CHL1 | Neural cell adhesion molecule L1-like protein | 7.69 | |
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| PEPD | PEPD protein | 6.6 | |
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| cDNA FLJ78437 | 6.31 | ||
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| PI16 | Peptidase inhibitor 16 | 5.76 | |
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| LRP1 | Prolow-density lipoprotein receptor-related protein 1 | 4.82 | |
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| CNTN1 | Contactin-1 | 4.64 | |
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| HEL-S-89n | Epididymis secretory sperm binding protein Li 89n | 4.63 | |
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| KRT9 | Keratin, type I cytoskeletal 9 | 4.51 | |
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| NID1 | Nidogen-1 | 3.86 | |
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| APOL3 | Apolipoprotein L3 | 3.4 | |
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| Complement factor D preproprotein | 3.34 | ||
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| PTGDS | Prostaglandin-H2 | 3.17 | |
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| Gelsolin exon 4 (Fragment) | 2.95 | ||
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| LYVE1 | Lymphatic vessel endothelial hyaluronic acid receptor 1 | 2.95 | |
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| MMRN1 | Multimerin-1 | 2.83 | |
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| cDNA FLJ90373 | 2.74 | ||
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| DKFZp686M0562 | Uncharacterized protein DKFZp686M0562 (Fragment) | 2.71 | |
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| CRISP3 | Cysteine-rich secretory protein 3 | 2.65 | |
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| CST3 | Cystatin-C | 2.64 | |
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| EFEMP1 | EGF Containing Fibulin Extracellular Matrix Protein 1 | 2.62 | |
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| FBLN1 | Fibulin-1 | 2.57 | |
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| Epididymis secretory sperm binding protein | 2.48 | ||
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| CAMP | Cathelicidin antimicrobial peptide | 2.47 | |
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| cDNA FLJ51742 | 2.43 | ||
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| cDNA FLJ77880 | 2.42 | ||
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| NCAM1 | Neural cell adhesion molecule 1 | 2.37 | |
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| CRTAC1 | Cartilage acidic protein 1 | 2.24 | |
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| cDNA, FLJ95746 | 2.23 | ||
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| C1QC | Adiponectin B | 2.15 | |
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| CD44 | CD44 antigen | 2.06 | |
| 2.01 | ||||
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| ADAMTS13 | Von Willebrand Factor-Cleaving Protease | 2.01 | |
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| VASN | Vasorin | 2 | |
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| CP | Ceruloplasmin (Fragment) | 1.88 | |
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| KRT1 | Keratin 1 | 1.87 | |
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| SERPINA11 | Serpin A11 | 1.81 | |
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| TNIK | TRAF2 and NCK-interacting protein kinase | 1.75 | |
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| LYZ | Lysozyme C | 1.74 | |
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| APCS | Serum amyloid P-component | 1.74 | |
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| AOC3 | Membrane primary amine oxidase | 1.73 | |
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| C1RL | Complement C1r subcomponent-like protein | 1.73 | |
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| C9 | Complement C9 | 1.71 | |
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| F5 | Coagulation factor V | 1.66 | |
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| C1S | Complement C1s subcomponent | 1.65 | |
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| IGK@ | IGK@ protein | 1.63 | |
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| SELENOP | Selenoprotein P | 1.55 | |
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| APOC1 | Apolipoprotein C-I | 1.55 | |
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| ITIH2 | Inter-alpha (Globulin) inhibitor H2 | 1.54 | |
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| C1R | Complement C1r subcomponent | 1.52 | |
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| SEMA4B | Semaphorin-4B | 1.51 | |
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| IGH@ | IGH@ protein | 0.56 | |
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| MS-D1 light chain variable region (Fragment) | 0.43 | ||
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| C4B | Complement protein C4B frameshift mutant (Fragment) | 0.43 | |
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| JCHAIN | Immunoglobulin J chain | 0.34 | |
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| EBI3 | Interleukin-27 subunit beta | 0.34 | |
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| GRN | Granulins | 0.33 | |
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| cDNA, FLJ93532 | 0.32 | ||
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| LALBA | Alpha-lactalbumin | 0.29 | |
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| PSG1 | Pregnancy specific beta-1-glycoprotein 1 | 0.25 | |
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| IGHM | Immunoglobulin heavy constant mu (Fragment) | 0.23 | |
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| IGKV2D-24 | Immunoglobulin kappa variable 2D-24 | 0.23 | |
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| FCN3 | Ficolin-3 | 0.22 | |
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| CD5L | CD5 antigen-like | 0.2 | |
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| ENO1 | Alpha-enolase | 0.16 | |
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| DBH | Dopamine beta-hydroxylase | 0.16 | |
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| FCN2 | Ficolin-2 | 0.13 | |
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| Full-length cDNA clone CS0DD006YL02 of Neuroblastoma | 0.08 | ||
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| HPR | Haptoglobin-related protein | 0.06 | |
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| HP | Haptoglobin | 0.01 |
Figure 3Differential protein expression.
(A and C) Volcano plots with red dots on the right-hand side indicating upregulation, green dots on the left-hand side indicating downregulation, and black dots indicating no significant change in protein expression levels based on the criteria of an absolute log10 fold change and P < 0.05 between early-onset preeclampsia and its control group (A), and between late-onset preeclampsia and its control group (C). (B and D) Clustergram for the expression of the DEPs between early-onset preeclampsia and control (B) and between late-onset preeclampsia and control (D).
List of differentially expressed proteins in the late-onset preeclampsia group.
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| PAPPA2 | Pappalysin-2 | 5.27 | |
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| CETP | Cholesteryl ester transfer protein plasma isoform 1 | 3.51 | |
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| F7 | Coagulation factor VII | 2.8 | |
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| IGL@ | IGL@ protein | 2.67 | |
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| VWF | von Willebrand factor | 2.46 | |
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| APOB | Apolipoprotein B | 1.93 | |
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| Testicular secretory protein Li 24 protein 1 | 1.74 | ||
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| SERPIND1 | Heparin cofactor 2 | 1.52 | |
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| APOM | Apolipoprotein M | 1.34 | |
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| GPLD1 | Phosphatidylinositol-glycan-specific phospholipase D | 1.26 | |
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| SERPINA7 | Thyroxine-binding globulin | 0.82 | |
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| C1RL | Complement C1r subcomponent-like protein | 0.63 | |
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| Receptor protein-tyrosine kinase | 0.61 | ||
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| PSG9 | Pregnancy-specific beta-1-glycoprotein 9 | 0.6 | |
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| CSF1R | Macrophage colony-stimulating factor 1 receptor | 0.56 | |
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| AAT | Alpha-1-antitrypsin MBrescia variant receptor 1 | 0.53 | |
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| ATIII-R2 | Antithrombin III isoform | 0.49 | |
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| SELL | L-selectin | 0.48 | |
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| IL6ST | Interleukin-6 receptor subunit beta (Fragment) | 0.47 | |
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| cDNA, FLJ93654 | 0.41 | ||
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| CNTN1 | member 2 (SERPINB2) | 0.36 | |
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| OIT3 | Oncoprotein-induced transcript 3 protein | 0.31 | |
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| C4B | Complement C4-B | 0.21 | |
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| cDNA, FLJ94213 | 0.18 |
Figure 4Gene ontology functional annotation.
The upregulated and downregulated proteins in the three categories of biological process, cellular component, and molecular function in (A) the early-onset preeclampsia group vs. its control group and (B) the late-onset preeclampsia group vs. its control group.
Figure 5Gene ontology (GO) functional enrichment.
Enriched GO terms for the upregulated and downregulated proteins and the associated protein numbers in (A) early-onset preeclampsia vs. its control and (B) late-onset preeclampsia vs. its control.
Figure 6Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment.
KEGG pathways enriched for the upregulated and downregulated proteins and the associated protein numbers in (A) early-onset preeclampsia vs. its control and (B) late-onset preeclampsia vs. its control.
Figure 7Protein level of pregnancy-specific beta-1-glycoprotein 9 (PSG9) in serum.
Concentration of PSG9 in the patient serum in control and LOPE groups. Values are shown as the mean ±SEM (n = 10); *P < 0.05 for Control vs. LOPE.