Under ambient conditions resorcinol (Res), C6H4(OH)2, favorably crystallizes from methanol and aqueous solutions as the anhydrate, in the form of polymorph α at room temperature. Anhydrous polymorph β can be obtained above 360 K. However, above 0.80 GPa the monohydrate Res·H2O is formed from the aqueous solution. The monohydrate is less stable than the duotritohydrate 3Res·2H2O, which nucleates later. The latter forms a tight passivation layer on the surface of monohydrate crystals and protects them from dissolution. Between 0.20 and 1.0 GPa the duotritohydrate is more favored than the previously reported Res polymorphs α and β. From a methanol solution above 0.40 GPa the methanol monosolvate Res·CH3OH precipitates. In Res·H2O resorcinol molecules assume the syn-syn conformation, and in 3Res·2H2O independent syn-syn and anti-anti conformers are present. The anti-anti molecule is orientationally disordered, despite the fact that usually the disorder requires extra space, while the high pressure suppresses the volume. In all three new solvates, the solvent molecules mediate the H bonding between the hydroxyl groups. The formation of solvates can be rationalized by the low potential energy of syn-syn conformers as well as the volume gain of the solvates in comparison to the summed volumes of the pure resorcinol crystal and stoichiometric amounts of the solvent. The strong preference of the analogous orcinol (5-methylresorcinol) for the monohydrate formation under normal conditions is unchanged under high pressure.
Under ambient conditions resorcinol (Res), C6H4(OH)2, favorably crystallizes from methanol and aqueous solutions as the anhydrate, in the form of polymorph α at room temperature. Anhydrous polymorph β can be obtained above 360 K. However, above 0.80 GPa the monohydrateRes·H2O is formed from the aqueous solution. The monohydrate is less stable than the duotritohydrate 3Res·2H2O, which nucleates later. The latter forms a tight passivation layer on the surface of monohydrate crystals and protects them from dissolution. Between 0.20 and 1.0 GPa the duotritohydrate is more favored than the previously reported Res polymorphs α and β. From a methanol solution above 0.40 GPa the methanol monosolvateRes·CH3OH precipitates. In Res·H2Oresorcinol molecules assume the syn-syn conformation, and in 3Res·2H2O independent syn-syn and anti-anti conformers are present. The anti-anti molecule is orientationally disordered, despite the fact that usually the disorder requires extra space, while the high pressure suppresses the volume. In all three new solvates, the solvent molecules mediate the H bonding between the hydroxyl groups. The formation of solvates can be rationalized by the low potential energy of syn-syn conformers as well as the volume gain of the solvates in comparison to the summed volumes of the pure resorcinol crystal and stoichiometric amounts of the solvent. The strong preference of the analogous orcinol (5-methylresorcinol) for the monohydrate formation under normal conditions is unchanged under high pressure.
Pure
compounds and their solvates and cocrystals can significantly
differ in their physical and chemical properties. Therefore, such
different forms of chemical compounds are often investigated to improve
the performance of products.[1−3] The investigation of hydrates
is of particular importance, because humid air and solvents are usually
involved in the manufacturing and formulation processes of (drug)
compounds. Hydrate formation concerns at least one-third of organic
compounds.[4,5] However, presently there are still no general
methods of predicting the preference for the formation of the pure
or solvated forms. It was shown that high pressure can promote the
formation of solvates for compounds that crystallize exclusively in
the pure form under ambient conditions: for example, thiourea, C(NH2)S, at 0.5 GPa forms the monohydrate, C(NH2)2S·H2O, and above 0.7 GPa the duotritohydrate,
3C(NH2)S·2H2O,[6] and the monohydrate of 1,4-diazabicyclo[2.2.2]octane dihydrobromide
(hereafter dabco2HBr; 1,4-diazabicyclo[2.2.2]octane = dabco) above
0.48 GPa forms monohydrate dabco2HBr·H2O polymorphs.[7] High-pressure crystallization proved to be an
efficient method for obtaining hydrates and other solvates of organic
compounds: for example, dabco salts,[8−10] 4,4′-bipyridinium
perchlorate,[11] 5,6-dimethylbenzimidazole.[12] xylazine hydrochloride,[13] and diphenylanthracene[14] as well as pharmaceutical
compounds of β-chlorpropamide[15] and
deoxycholic acid.[16] It was shown that the
preferred formation of these hydrates is connected with an increase
in their volume, in comparison to the volumes of the exact amount
of the pure host compound crystallized separately and with the solvent
present in the form of either a liquid or solid depending on the thermodynamic
conditions;[6−10] also the formation of new types of intermolecular bonds plays an
important role.[17,18]The reverse effect of pressure
favoring the crystallization of
separate compounds has also been observed, but less frequently. For
example, the isochoric crystallization of thiourea from an aqueous
solution above 1.0 GPa yields the pure thiourea and ice VI, the methane
hydrate, strongly preferred by pressure, decomposes above 8.0 GPa,[19] and Y2(C2O4)3·10H2O undergoes a partial dehydration
at 1 GPa, forming monoclinic Y2(C2O4)3·6H2O as single-crystalline inclusions
in the original phase.[20]Presently,
we have investigated the preferences of resorcinol and
orcinol (Figure )
for crystallization as either the pure or solvated compounds under
high pressure. Resorcinol crystallizes exclusively as the anhydrate
from aqueous solutions under the standard conditions, which contrasts
with the analogous orcinol, where hydrate formation is strongly favored.
Resorcinol and its derivatives as well as isomeric quinol compounds[21] are applied as medicines, and they can also
be used as monomers (or as reactive additives) which increase the
molecular weight of (pre)polymers. They can also be used in adhesives
for wood.[22] The active ingredients in the
extracts of various plants contain resorcinol derivatives, which are
primarily used in the treatment of cancer, osteoporosis, gastric ulcers,
and other diseases.[23]
Figure 1
Resorcinol and orcinol
conformers. Atomic labels usually applied
in the literature and in this report are shown in the first drawing.
Resorcinol and orcinol
conformers. Atomic labels usually applied
in the literature and in this report are shown in the first drawing.Five polymorphs of pure resorcinol, labeled α
and β
(the same space group Pna21),[24,25] γ (Pnna),[26,27] δ (space
group unknown),[26,27] and ε (space group P212121)[28] have been reported. The density of the α polymorph,
which is stable under normal conditions, is lower than that of the
high-temperature polymorph β.[29] Their
structures were determined by X-ray diffraction in the 1930s,[24,25] the structure of the α polymorph was one of the first for
an organic compound to be determined by neutron diffraction in 1956,[30] and the ε polymorph was discovered in
2016. Despite such a long and varied record of experimental studies,
no hydrates of resorcinol have been reported, which contrasts with
a strong preference of orcinol (a close analogue of resorcinol) to
form the hydrate. Our present study is aimed at determining the thermodynamic
preferences of resorcinol solvates and to form an understanding of
the mechanisms favoring the formation of solvates at high pressure.
To study these preferences, we have performed high-pressure recrystallizations
of resorcinol in aqueous, methanol, and ethanol solutions. We have
also performed high-pressure crystallizations of orcinol, to allow
a comparison of the results obtained from the study of these two similar
compounds.
Experimental Section
The high-pressure
crystallizations of the aqueous and methanol
solutions were performed in a modified diamond anvil cell (DAC).[31] Resorcinol solutions of various concentrations
were used in order to start the nucleation at pressure under a range
of isochoric and isothermal conditions.[32] The in situ isothermal crystallization of the aqueous solutions,
at 296 K, yielded the monohydrateC6H4(OH)2·H2O at 0.8 GPa (Figure ). The monohydrate precipitates as a powdered
mass, and when the pressure was released to 0.35 GPa, all grains but
one were dissolved and a bigger single crystal was grown by slowly
increasing the pressure to 0.93 GPa (Figure ). The crystallization process took about
2 h, and we noticed that after about 20 min at 0.93 GPa the crystal
surface was covered by a layer of tightly packed tiny crystals of
another new form (Figure ). This monohydrate sample could be kept for days without
visible changes. However, we have established that a release of pressure
causes the passivation layer, most likely formed of hydrate 3Res·2H2O, to dissolve followed by the monohydrate dissolving gradually,
while a single crystal of the duotritohydrate grew until the monohydrate
disappeared (Figure ). The conclusion that the passivation layer is formed of the duotritohydrate
is based on the observation that this is the stable form of resorcinol
in the aqueous solution between 0.2 and 1.0 GPa and that no other
form of resorcinol could be obtained under these conditions. The Res·H2O and 3Res·2H2O crystals can be easily distinguished
by their morphology, unit cell parameters, and symmetry (Figures and 3 and Table ); however, the crystal grains constituting the passivation layer
are too small for such considerations. It can be noted that the 3:2
host molecules to crystallization water molecules ratio is relatively
rare among hydrates. For this reason a common name for this hydrate
stoichiometry is used, and in a few research papers[33,34] a “2/3 hydrate” term was used. We have suggested the
term “duotrito”, used in the literature.[35,36]
Figure 2
Isothermal
crystallization of Res·H2O at 296 K
up to 0.93 GPa and of 3Res·2H2O at 0.93 GPa. Two small
ruby chips for the pressure calibration lie at the edge of the DAC
chamber. The seed is indicated by the red arrow.
Figure 3
A Res·H2O crystal (cf. Figure ) covered by tiny 3Res·2H2O crystals at 296
K/0.93 GPa (a). After the pressure is released
(b–d), dissolution concomitant with the single-crystal nucleation
of 3Res·2H2O ((c), the seed indicated by the red arrow)
and its further growth causes a further gradual reduction of pressure
(e–g). Then (h, i), the pressure was increased to continue
the growth. Several small ruby chips for the pressure calibration
lie along the bottom edge of the DAC chamber.
Table 1
Selected Crystallographic Data of
Resorcinol Solvatesa
Res·CH3OH
Res·H2O
3Res·2H2O
pressure
0.80 GPa
0.93 GPa
0.49 MPa
0.70 GPa
space group
P212121
C2/c
P212121
P212121
unit cell
a (Å)
5.6567(18)
8.0312(8)
6.0242(12)
5.9240(3)
b (Å)
7.6544(5)
8.1080(6)
8.1523(12)
8.1201(3)
c (Å)
13.226(3)
26.01(4)
14.32(3)
14.087(9)
β (deg)
90
95.31
90
90
V (Å3)
572.7(2)
1686(2)
703.4(14)
677.6(4)
Z/Z′
4/1
12/1.5
4/1
4/1
Dx (g/cm3)
1.486
1.435
1.342
1.393
conformation
syn-syn
syn-syn and anti-anti
syn-syn
syn-syn
Cf. Table S1 in the Supporting Information.
Isothermal
crystallization of Res·H2O at 296 K
up to 0.93 GPa and of 3Res·2H2O at 0.93 GPa. Two small
ruby chips for the pressure calibration lie at the edge of the DAC
chamber. The seed is indicated by the red arrow.A Res·H2O crystal (cf. Figure ) covered by tiny 3Res·2H2O crystals at 296
K/0.93 GPa (a). After the pressure is released
(b–d), dissolution concomitant with the single-crystal nucleation
of 3Res·2H2O ((c), the seed indicated by the red arrow)
and its further growth causes a further gradual reduction of pressure
(e–g). Then (h, i), the pressure was increased to continue
the growth. Several small ruby chips for the pressure calibration
lie along the bottom edge of the DAC chamber.Cf. Table S1 in the Supporting Information.In the second series of experiments, resorcinol was
crystallized
in the DAC of the methanol solution. The new resorcinol monosolvateC6H4(OH)2·CH3OH nucleated
under isochoric conditions at 0.4 GPa, and then it was isothermally
compressed up to 0.70 GPa (Figure and Table ). Finally, orcinol was recrystallized in order to also check
its stability under the high-pressure conditions. The orcinol monohydrate
C7H6(OH)2·H2O was
fully dissolved either in methanol or in water. The isochoric recrystallizations
from the methanol solution yielded the monohydrate C7H6(OH)2·H2O at 0.2 GPa; likewise,
the recrystallizations of aqueous solution at 0.2 GPa also yielded
the monohydrate (Figures S1 and S2).
Figure 4
Isochoric crystallization
of Res·CH3OH at 0.49
GPa and subsequent (the last panel) isothermal compression of the
single crystal to 0.70 GPa. An irregular ruby chip for pressure calibration
lies at the center of the chamber.
Isochoric crystallization
of Res·CH3OH at 0.49
GPa and subsequent (the last panel) isothermal compression of the
single crystal to 0.70 GPa. An irregular ruby chip for pressure calibration
lies at the center of the chamber.The pressure in the DAC chamber was calibrated by the ruby-fluorescence
method with a Photon Control Inc. spectrometer, with an accuracy of
0.02 GPa.[37] The calibration was repeated
before and after each diffraction measurement.[38] The single-crystal data have been measured with a KUMA
KM4-CCD diffractometer. The CrysAlis software[39] was used for the data collections[40] and
preliminary reduction of data after correcting the intensities for
the effects of DAC absorption, sample shadowing by the gasket, and
sample absorption.[41,42] The reflections overlapping with
diamond reflections were eliminated. The structures were refined with
full-matrix least squares on F2 using
SHELX-L.[43,44] Phenyl hydrogen atoms were ideally positioned
according to the molecular geometry. The hydroxyl and water H atoms
were located on the difference Fourier maps and then included in the
refinements in the positions consistent with the molecular dimensions
(O–H distance, 0.85 Å, C–O–H angle, 109.30°;
H–O–H angle, 109.5°). The crystallographic and
experimental details are given in Table S1 and deposited in the CIF format in the Cambridge Structure Database
with CCDC numbers 1974181–1974186 and 1974294–1974295. The CIFs can be requested free of charge from https://www.ccdc.cam.ac.uk.
Discussion
Chemical compounds often display a strong preference
for crystallization
in the form of either anhydrates or hydrates, when the crystallization
is performed in the laboratory in open vials. In many cases, the presence
of moisture in the atmospheric air suffices for the hydrate formation,
even when the pure compound is dissolved in (initially) dry solvent
but the solution is not then sealed from the atmosphere. There are
also compounds that form anhydrates or hydrates depending on the composition
of the solution, air humidity, temperature, etc. Many compounds crystallize
as anhydrates even from aqueous solutions. Resorcinol belongs to this
latter group. Resorcinol has been thoroughly studied for decades,
with five polymorphs (α, β, γ, δ, and ε)
reported, but no hydrate of resorcinol was obtained. At the same time
resorcinol favorably forms cocrystals with various compounds and presently
there are 121 such multicomponent deposits in the Cambridge Structure
Database (version 1.23). Moreover, orcinol (5-methylresorcinol), despite
being a close analogue of resorcinol, displays a strong preference
for the formation of hydrates. Namely, under standard conditions orcinol
favorably forms a monohydrate and dry solvents are required to obtain
the anhydrate (two polymorphs of pure orcinol are known).[45] Hence, our present study is aimed at understanding
the strong preference of resorcinol to form the anhydrate. We have
applied high-pressure crystallization to establish whether this promotes
hydrate formation by resorcinol. Recrystallizations from methanol
and aqueous solutions in the DAC yielded new forms of resorcinol,
as either polymorph α or β, up to 0.5 GPa. However, presently
we have established that the pressure efficiently induces the formation
of hydrates and a methanol solvate of resorcinol. The resorcinol monohydrate
is formed in isothermal crystallization at 0.80 GPa. Then the surface
of the monohydrate was tightly covered by many tiny crystals of duotritohydrate,
3C6H4(OH)2·2H2O (Figure ). We have established
that Res·H2O is metastable, but it is protected from
dissolution by the passivation layer of 3Res·2H2O
crystals. In the crystal structure of Res·H2O, the
water molecule mediates the hydrogen bonds between the hydroxyl groups
(Figure ). There are
four symmetry-independent OH···O hydrogen bonds. Their
dimensions are given in Table S3 and plotted
in Figure S3. All of the OH···O
bonds bind water and resorcinol molecules, while no water···water
or resorcinol···resorcinol bonds are present (Figures and 6).
Figure 5
Autostereogram[51] of the molecular packing
in Res·H2O at 0.80 GPa/296 K. The OH···O
hydrogen bonds are indicated as cyan lines, and the labels of H atoms
participating in the H bonds are specified.
Figure 6
Molecular
packing in 3Res·2H2O at 0.93 GPa/296
K. H-B bonds are indicated by cyan lines. Capital letters A and B
label the independent resorcinol molecules. Two overlapping positions
of disordered half-occupied molecules B are shown, also viewed perpendicular
to the ring at the bottom (indicated by the arrow).
Autostereogram[51] of the molecular packing
in Res·H2O at 0.80 GPa/296 K. The OH···O
hydrogen bonds are indicated as cyan lines, and the labels of H atoms
participating in the H bonds are specified.Molecular
packing in 3Res·2H2O at 0.93 GPa/296
K. H-B bonds are indicated by cyan lines. Capital letters A and B
label the independent resorcinol molecules. Two overlapping positions
of disordered half-occupied molecules B are shown, also viewed perpendicular
to the ring at the bottom (indicated by the arrow).In the structure of 3Res·2H2O, there are
two independent
molecules of resorcinol; one of them (labeled A) is ordered in a general
position, whereas the other (molecule B) is disordered and located
on an inversion center (Figure ). The water molecule lies in a general position. The water
molecule forms three hydrogen bonds to resorcinol molecule A and one
H2O···H2Ohydrogen bond. Each
resorcinol molecule A is OH···O bonded to three water
molecules and to one molecule B. Each molecule B is OH···O
bonded to two molecules A. The H-bonding pattern is shown in Figure (cf. Table S3). The disorder of molecule B can be
described as a nearly perfect superposition of the benzene ring with
its half-occupied sites of hydroxyl group substituents at C1, C3,
and their C-transformed
sites C1′ and C3′. The conformation of the hydroxyl
groups is syn-syn in molecule A and anti-anti in molecule B. It is characteristic that a very similar type of
disordered molecular orientation was reported for resorcinol cocrystals
with hexamine[46] and bis(5-ferrocenylpyrimidine).[47] In these two cocrystals the disordered molecules
are in an anti-anti configuration. In resorcinol
cocrystallized with N-phthaloylglycine,[48] the syn-syn conformer of resorcinol
is disordered. Other types of disorder of resorcinol molecules were
observed in cocrystals with terpyridine[49] and several complexes of methylviologen.[50]The structure of Res-CH3OH determined at 0.49 and
0.70
GPa, of orthorhombic space group P212121, is isostructural with resorcinol monohydrate
(cf. Table and Figures and 7). In the structure of Res·CH3OH, the resorcinol
and methanol molecules are H-bonded into ribbons along [010].
Figure 7
Autosterographic
view of the structure of Res·CH3OH at 0.49 GPa/296
K. The H bonds are indicated by cyan lines.
Autosterographic
view of the structure of Res·CH3OH at 0.49 GPa/296
K. The H bonds are indicated by cyan lines.Resorcinol molecules in pure polymorphs, solvates, and cocrystals
assume the anti-anti, anti-syn,
and syn-syn configurations (Figure ). The DFT calculations at the RB3LYP/6-31G
level of theory of the potential energy for isolated molecules indicate
that the anti-syn conformer is 0.94 kJ mol–1 more stable than anti-anti conformer and 2.15 kJ
mol–1 more stable than the syn-syn conformer. These values are smaller than the energy of cohesion
forces in H-bonded crystals, but they can be significant enough to
help the stability of the observed resorcinol forms.We established
that one of the H bonds in the monohydrate, O–H···O2664, has a dimension of nearly 3 Å (Figure ) and is much longer than the
analogous H bonds in other solvates and in pure resorcinol. It is
plausible that some steric hindrances in the structure of Res·H2O prevent the formation of the H-bonding network, efficiently
using up all the available H donors and H acceptors. This could be
the reason for the metastability of the Res·H2O and
its subsequent transformation to 3Res·2H2O, where
all hydroxyl groups and H2O molecules can be linked by
H bonds between 2.65 and 2.85 Å (Figure ).
Figure 8
Pressure dependence of O···O
H bond lengths in Res·H2O, 3Res·2H2O, and Res·CH3OH,
as well as in resorcinol polymorphs α and β. Symmetry
operations indicated by ORTEP codes[53] are
explicitly given in Table S9.
Pressure dependence of O···O
H bond lengths in Res·H2O, 3Res·2H2O, and Res·CH3OH,
as well as in resorcinol polymorphs α and β. Symmetry
operations indicated by ORTEP codes[53] are
explicitly given in Table S9.The molecular volumes of Res·H2O, 3Res·2H2O, and Res·CH3OH are somewhat smaller than
the sums of volumes of the stoichiometric amounts of pure resorcinol
and solvent moleculeswhere Vm is the
molecular volume of the solvates, the pure resorcinol polymorph β
(stable in the considered range of pressure), and the solvents (Figure ). In these comparisons
we have applied volumes of the separate components (resorcinol polymorph
β and liquid solvents) compressed to the appropriate pressure
conditions (Figure ).[52,54]
Figure 9
Pressure dependence of molecular volume referred
to one resorcinol
molecule in polymorphs α (black circles), β (empty black
circles),[52] Res·H2O (red
triangle), 3Res·2H2O (green triangles), and Res·CH3OH (blue triangles). The vertical arrows indicate the difference
in the solvate and appropriate amounts of the solvate volume (water
or methanol).[54]
Figure 10
Schematic
diagram of Gibbs free energy versus pressure at 296 K
for resorcinol polymorphs α (red line),[52] β (blue),[52] Res·H2O (orange), and 3Res·2H2O (green).
Pressure dependence of molecular volume referred
to one resorcinol
molecule in polymorphs α (black circles), β (empty black
circles),[52] Res·H2O (red
triangle), 3Res·2H2O (green triangles), and Res·CH3OH (blue triangles). The vertical arrows indicate the difference
in the solvate and appropriate amounts of the solvate volume (water
or methanol).[54]Schematic
diagram of Gibbs free energy versus pressure at 296 K
for resorcinol polymorphs α (red line),[52] β (blue),[52] Res·H2O (orange), and 3Res·2H2O (green).This result indicates that the volume gain is a significant
factor
for the formation of these solvates. The energy associated with this
volume difference in comparison to β-resorcinol is 4.8 kJ mol–1 for Res·H2O at 0.8 GPa, 1.2 kJ mol–1 for 3Res·2H2O at 0.45 GPa and 1.7
kJ mol–1 at 0.82 GPa, and 3.6 kJ mol–1 for Res·CH3OH at 0.6 GPa. It appears that the effect
of the largest work component gain for Res·H2O is
diminished by the inadequate H-bonding pattern in the structure (one
of the possible H bonds cannot be formed)—hence the internal
energy of the Res·H2O structure increases and it is
metastable in comparison to 3Res·2H2O, as schematically
illustrated in Figure . The energy of one hydrogen bond between two hydroxyl groups can
be roughly estimated as several kJ mol–1; therefore,
this value can be significant for changing the balance between the
resorcinol solvates.
Conclusions
We
have found that high pressure favors the formation of new solvates,
which are unstable under ambient conditions. These new forms are resorcinolmonohydrate, duotritohydrate, and monomethanol solvates. The stability
of these new solvates at high pressure can be associated with the
formation of new H bonds and with a volume gain of the solvates in
comparison to the summed volume of their components. The H bonding
plays a direct role in the molecular aggregation, as the solvent molecules
mediate most of the H bonds between the resorcinol hydroxyl groups.
The metastability of the monohydrate has been associated with a disadvantageous
molecular arrangement hampering the formation of one of the possible
OH···O bonds. Surprisingly, the more stable duotritohydrate
is disordered, as one of its independent molecules assumes two orientations
in the structure. This contrasts with the general assumption that
high pressure eliminates orientational disorder. Although none of
the new solvates could be recovered to ambient conditions, the revealed
mechanisms of the pressure effects can prove useful for obtaining
new stable solvates of this and other compounds. The comparison of
resorcinol and orcinol illustrates that a relatively small structural
difference (the methanol group at C5 in orcinol) can cause a drastic
effect in the solvation of similar compounds. Such differences can
be reduced, to some extent, by pressure, as has been presently observed
for resorcinol hydrates promoted by high pressure. However, none of
the resorcinol hydrates is isostructural with the orcinol monohydrate
(similarly, as none of their anhydrate polymorphs are isostructural
either).
Authors: Qiang Zhu; Alexander G Shtukenberg; Damien J Carter; Tang-Qing Yu; Jingxiang Yang; Ming Chen; Paolo Raiteri; Artem R Oganov; Boaz Pokroy; Iryna Polishchuk; Peter J Bygrave; Graeme M Day; Andrew L Rohl; Mark E Tuckerman; Bart Kahr Journal: J Am Chem Soc Date: 2016-04-05 Impact factor: 15.419