Literature DB >> 32952115

CNGBdb: China National GeneBank DataBase.

Feng Zhen Chen1, Li Jin You1, Fan Yang1, Li Na Wang1, Xue Qin Guo1, Fei Gao1, Cong Hua1, Cong Tan1, Lin Fang2, Ri Qiang Shan3, Wen Jun Zeng1, Bo Wang1, Ren Wang1, Xun Xu1,2,4, Xiao Feng Wei1.   

Abstract

China National GeneBank DataBase (CNGBdb) is a data platform aiming to systematically archiving and sharing of multi-omics data in life science. As the service portal of Bio-informatics Data Center of the core structure, namely, "Three Banks and Two Platforms" of China National GeneBank (CNGB), CNGBdb has the advantages of rich sample resources, data resources, cooperation projects, powerful data computation and analysis capabilities. With the advent of high throughput sequencing technologies, research in life science has entered the big data era, which is in the need of closer international cooperation and data sharing. With the development of China's economy and the increase of investment in life science research, we need to establish a national public platform for data archiving and sharing in life science to promote the systematic management, application and industrial utilization. Currently, CNGBdb can provide genomic data archiving, information search engines, data management and data analysis services. The data schema of CNGBdb has covered projects, samples, experiments, runs, assemblies, variations and sequences. Until May 22, 2020, CNGBdb has archived 2176 research projects and more than 2221 TB sequencing data submitted by researchers globally. In the future, CNGBdb will continue to be dedicated to promoting data sharing in life science research and improving the service capability. CNGBdb website is: https://db.cngb.org/.

Keywords:  China National GenBank Database; data archiving; data sharing; omics data

Mesh:

Year:  2020        PMID: 32952115     DOI: 10.16288/j.yczz.20-080

Source DB:  PubMed          Journal:  Yi Chuan        ISSN: 0253-9772


  57 in total

1.  Multi-omics analyses of serum metabolome, gut microbiome and brain function reveal dysregulated microbiota-gut-brain axis in bipolar depression.

Authors:  Zhiming Li; Jianbo Lai; Peifen Zhang; Jiahong Ding; Jiajun Jiang; Chuanfa Liu; Huimin Huang; Hefu Zhen; Caixi Xi; Yuzhe Sun; Lingling Wu; Lifang Wang; Xingle Gao; Yan Li; Yaoyang Fu; Zhuye Jie; Shenghui Li; Danhua Zhang; Yiqing Chen; Yiyi Zhu; Shaojia Lu; Jing Lu; Dandan Wang; Hetong Zhou; Xiuxia Yuan; Xue Li; Lijuan Pang; Manli Huang; Huanming Yang; Wenwei Zhang; Susanne Brix; Karsten Kristiansen; Xueqin Song; Chao Nie; Shaohua Hu
Journal:  Mol Psychiatry       Date:  2022-04-20       Impact factor: 15.992

2.  Blood transcriptome analysis revealed the immune changes and immunological adaptation of wildness training giant pandas.

Authors:  Miao Yang; Yan Huang; Honglin Wu; Caiwu Li; Shanshan Ling; Jie Sun; Haibo Shen; Bisong Yue; Xiuyue Zhang
Journal:  Mol Genet Genomics       Date:  2022-01-05       Impact factor: 3.291

3.  A donor-DNA-free CRISPR/Cas-based approach to gene knock-up in rice.

Authors:  Yu Lu; Jiyao Wang; Bo Chen; Sudong Mo; Lei Lian; Yanmin Luo; Dehui Ding; Yanhua Ding; Qing Cao; Yucai Li; Yong Li; Guizhi Liu; Qiqi Hou; Tingting Cheng; Junting Wei; Yanrong Zhang; Guangwu Chen; Chao Song; Qiang Hu; Shuai Sun; Guangyi Fan; Yating Wang; Zhiting Liu; Baoan Song; Jian-Kang Zhu; Huarong Li; Linjian Jiang
Journal:  Nat Plants       Date:  2021-11-15       Impact factor: 15.793

4.  Single-cell ATAC-seq maps the comprehensive and dynamic chromatin accessibility landscape of CAR-T cell dysfunction.

Authors:  Penglei Jiang; Zhaoru Zhang; Yongxian Hu; Zuyu Liang; Yingli Han; Xia Li; Xin Zeng; Hao Zhang; Meng Zhu; Jian Dong; He Huang; Pengxu Qian
Journal:  Leukemia       Date:  2022-08-12       Impact factor: 12.883

5.  Limits to the cellular control of sequestered cryptophyte prey in the marine ciliate Mesodinium rubrum.

Authors:  Andreas Altenburger; Huimin Cai; Qiye Li; Kirstine Drumm; Miran Kim; Yuanzhen Zhu; Lydia Garcia-Cuetos; Xiaoyu Zhan; Per Juel Hansen; Uwe John; Shuaicheng Li; Nina Lundholm
Journal:  ISME J       Date:  2020-11-23       Impact factor: 10.302

6.  Characterization and description of Faecalibacterium butyricigenerans sp. nov. and F. longum sp. nov., isolated from human faeces.

Authors:  Yuanqiang Zou; Xiaoqian Lin; Wenbin Xue; Li Tuo; Ming-Sheng Chen; Xiao-Hui Chen; Cheng-Hang Sun; Feina Li; Shao-Wei Liu; Ying Dai; Karsten Kristiansen; Liang Xiao
Journal:  Sci Rep       Date:  2021-05-31       Impact factor: 4.379

7.  A Comprehensive RNA Study to Identify circRNA and miRNA Biomarkers for Docetaxel Resistance in Breast Cancer.

Authors:  Peide Huang; Fengyu Li; Zongchao Mo; Chunyu Geng; Fang Wen; Chunyan Zhang; Jia Guo; Song Wu; Lin Li; Nils Brünner; Jan Stenvang
Journal:  Front Oncol       Date:  2021-05-14       Impact factor: 6.244

8.  Coronavirus GenBrowser for monitoring the transmission and evolution of SARS-CoV-2.

Authors:  Dalang Yu; Xiao Yang; Bixia Tang; Yi-Hsuan Pan; Jianing Yang; Guangya Duan; Junwei Zhu; Zi-Qian Hao; Hailong Mu; Long Dai; Wangjie Hu; Mochen Zhang; Ying Cui; Tong Jin; Cui-Ping Li; Lina Ma; Xiao Su; Guoqing Zhang; Wenming Zhao; Haipeng Li
Journal:  Brief Bioinform       Date:  2022-03-10       Impact factor: 11.622

9.  Identification of QTL related to anther color and hull color by RAD sequencing in a RIL population of Setaria italica.

Authors:  Huifang Xie; Junliang Hou; Nan Fu; Menghan Wei; Yunfei Li; Kang Yu; Hui Song; Shiming Li; Jinrong Liu
Journal:  BMC Genomics       Date:  2021-07-20       Impact factor: 3.969

10.  Influence of low tumor content on tumor mutational burden estimation by whole-exome sequencing and targeted panel sequencing.

Authors:  Wenxin Zhang; Ruixia Wang; Huan Fang; Xiangyuan Ma; Dan Li; Tao Liu; Zhenxi Chen; Ke Wang; Shiguang Hao; Zicheng Yu; Zhili Chang; Chenglong Na; Yin Wang; Jian Bai; Yanyan Zhang; Fang Chen; Miao Li; Chao Chen; Liangshen Wei; Jinghua Li; Xiaoyan Chang; Shoufang Qu; Ling Yang; Jie Huang
Journal:  Clin Transl Med       Date:  2021-05
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.