Literature DB >> 32949346

An MRI-Based, Data-Driven Model of Cortical Laminar Connectivity.

Ittai Shamir1, Yaniv Assaf2,3.   

Abstract

Over the past two centuries, great scientific efforts have been spent on deciphering the structure and function of the cerebral cortex using a wide variety of methods. Since the advent of MRI neuroimaging, significant progress has been made in imaging of global white matter connectivity (connectomics), followed by promising new studies regarding imaging of grey matter laminar compartments. Despite progress in both fields, there still lacks mesoscale information regarding cortical laminar connectivity that could potentially bridge the gap between the current resolution of connectomics and the relatively higher resolution of cortical laminar imaging. Here, we systematically review a sample of prominent published articles regarding cortical laminar connectivity, in order to offer a simplified data-driven model that integrates white and grey matter MRI datasets into a novel way of exploring whole-brain tissue-level connectivity. Although it has been widely accepted that the cortex is exceptionally organized and interconnected, studies on the subject display a variety of approaches towards its structural building blocks. Our model addresses three principal cortical building blocks: cortical layer definitions (laminar grouping), vertical connections (intraregional, within the cortical microcircuit and subcortex) and horizontal connections (interregional, including connections within and between the hemispheres). While cortical partitioning into layers is more widely accepted as common knowledge, certain aspects of others such as cortical columns or microcircuits are still being debated. This study offers a broad and simplified view of histological and microscopical knowledge in laminar research that is applicable to the limitations of MRI methodologies, primarily regarding specificity and resolution.

Keywords:  Cortical connectivity2; Cortical layer connectivity4; Cortical layers1; Cortical modelling5; Magnetic resonance imaging3

Year:  2020        PMID: 32949346     DOI: 10.1007/s12021-020-09491-7

Source DB:  PubMed          Journal:  Neuroinformatics        ISSN: 1539-2791


  43 in total

1.  Laminar distribution of neurons in extrastriate areas projecting to visual areas V1 and V4 correlates with the hierarchical rank and indicates the operation of a distance rule.

Authors:  P Barone; A Batardiere; K Knoblauch; H Kennedy
Journal:  J Neurosci       Date:  2000-05-01       Impact factor: 6.167

2.  Visualization of cortical lamination patterns with magnetic resonance imaging.

Authors:  Daniel Barazany; Yaniv Assaf
Journal:  Cereb Cortex       Date:  2011-10-08       Impact factor: 5.357

3.  Dynamic causal modelling.

Authors:  K J Friston; L Harrison; W Penny
Journal:  Neuroimage       Date:  2003-08       Impact factor: 6.556

4.  Resolution considerations in imaging of the cortical layers.

Authors:  Shlomi Lifshits; Omri Tomer; Ittai Shamir; Daniel Barazany; Galia Tsarfaty; Saharon Rosset; Yaniv Assaf
Journal:  Neuroimage       Date:  2017-03-06       Impact factor: 6.556

5.  Functional properties of neurons in middle temporal visual area of the macaque monkey. I. Selectivity for stimulus direction, speed, and orientation.

Authors:  J H Maunsell; D C Van Essen
Journal:  J Neurophysiol       Date:  1983-05       Impact factor: 2.714

6.  A predictive network model of cerebral cortical connectivity based on a distance rule.

Authors:  Mária Ercsey-Ravasz; Nikola T Markov; Camille Lamy; David C Van Essen; Kenneth Knoblauch; Zoltán Toroczkai; Henry Kennedy
Journal:  Neuron       Date:  2013-10-02       Impact factor: 17.173

7.  Using Diffusion Tractography to Predict Cortical Connection Strength and Distance: A Quantitative Comparison with Tracers in the Monkey.

Authors:  Chad J Donahue; Stamatios N Sotiropoulos; Saad Jbabdi; Moises Hernandez-Fernandez; Timothy E Behrens; Tim B Dyrby; Timothy Coalson; Henry Kennedy; Kenneth Knoblauch; David C Van Essen; Matthew F Glasser
Journal:  J Neurosci       Date:  2016-06-22       Impact factor: 6.167

8.  A blueprint of mammalian cortical connectomes.

Authors:  Alexandros Goulas; Piotr Majka; Marcello G P Rosa; Claus C Hilgetag
Journal:  PLoS Biol       Date:  2019-03-22       Impact factor: 8.029

9.  Dynamic causal modelling revisited.

Authors:  K J Friston; Katrin H Preller; Chris Mathys; Hayriye Cagnan; Jakob Heinzle; Adeel Razi; Peter Zeidman
Journal:  Neuroimage       Date:  2017-02-17       Impact factor: 6.556

Review 10.  Human connectomics - what will the future demand?

Authors:  Heidi Johansen-Berg
Journal:  Neuroimage       Date:  2013-05-29       Impact factor: 6.556

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  4 in total

1.  Modelling the laminar connectome of the human brain.

Authors:  Ittai Shamir; Omri Tomer; Ronnie Krupnik; Yaniv Assaf
Journal:  Brain Struct Funct       Date:  2022-06-03       Impact factor: 3.270

2.  Modelling Cortical Laminar Connectivity in the Macaque Brain.

Authors:  Ittai Shamir; Yaniv Assaf
Journal:  Neuroinformatics       Date:  2021-08-14

Review 3.  Null models in network neuroscience.

Authors:  František Váša; Bratislav Mišić
Journal:  Nat Rev Neurosci       Date:  2022-05-31       Impact factor: 38.755

4.  Structure-function clustering in weighted brain networks.

Authors:  Jonathan J Crofts; Michael Forrester; Stephen Coombes; Reuben D O'Dea
Journal:  Sci Rep       Date:  2022-10-06       Impact factor: 4.996

  4 in total

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