Literature DB >> 32939952

Targeting RNA G-Quadruplex in SARS-CoV-2: A Promising Therapeutic Target for COVID-19?

Chuanqi Zhao1, Geng Qin1, Jingsheng Niu1,2, Zhao Wang1,2, Chunyu Wang3, Jinsong Ren1,2, Xiaogang Qu1,2.   

Abstract

The COVID-19 pandemic caused by SARS-CoV-2 has become a global threat. Understanding the underlying mechanisms and developing innovative treatments are extremely urgent. G-quadruplexes (G4s) are important noncanonical nucleic acid structures with distinct biofunctions. Four putative G4-forming sequences (PQSs) in the SARS-CoV-2 genome were studied. One of them (RG-1), which locates in the coding sequence region of SARS-CoV-2 nucleocapsid phosphoprotein (N), has been verified to form a stable RNA G4 structure in live cells. G4-specific compounds, such as PDP (pyridostatin derivative), can stabilize RG-1 G4 and significantly reduce the protein levels of SARS-CoV-2 N by inhibiting its translation both in vitro and in vivo. This result is the first evidence that PQSs in SARS-CoV-2 can form G4 structures in live cells, and that their biofunctions can be regulated by a G4-specific stabilizer. This finding will provide new insights into developing novel antiviral drugs against COVID-19.
© 2020 Wiley-VCH GmbH.

Entities:  

Keywords:  G-quadruplex; RNA; drug discovery; inhibitors; viruses

Year:  2020        PMID: 32939952     DOI: 10.1002/anie.202011419

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  24 in total

1.  Binding Properties of RNA Quadruplex of SARS-CoV-2 to Berberine Compared to Telomeric DNA Quadruplex.

Authors:  Rosario Oliva; Sanjib Mukherjee; Magiliny Manisegaran; Marco Campanile; Pompea Del Vecchio; Luigi Petraccone; Roland Winter
Journal:  Int J Mol Sci       Date:  2022-05-19       Impact factor: 6.208

2.  Supramolecular Cylinders Target Bulge Structures in the 5' UTR of the RNA Genome of SARS-CoV-2 and Inhibit Viral Replication*.

Authors:  Lazaros Melidis; Harriet J Hill; Nicholas J Coltman; Scott P Davies; Kinga Winczura; Tasha Chauhan; James S Craig; Aditya Garai; Catherine A J Hooper; Ross T Egan; Jane A McKeating; Nikolas J Hodges; Zania Stamataki; Pawel Grzechnik; Michael J Hannon
Journal:  Angew Chem Int Ed Engl       Date:  2021-07-09       Impact factor: 16.823

3.  Identification and evaluation of potential SARS-CoV-2 antiviral agents targeting mRNA cap guanine N7-Methyltransferase.

Authors:  Renata Kasprzyk; Tomasz J Spiewla; Miroslaw Smietanski; Sebastian Golojuch; Laura Vangeel; Steven De Jonghe; Dirk Jochmans; Johan Neyts; Joanna Kowalska; Jacek Jemielity
Journal:  Antiviral Res       Date:  2021-07-23       Impact factor: 5.970

4.  Potential G-quadruplexes and i-Motifs in the SARS-CoV-2.

Authors:  Efres Belmonte-Reche; Israel Serrano-Chacón; Carlos Gonzalez; Juan Gallo; Manuel Bañobre-López
Journal:  PLoS One       Date:  2021-06-08       Impact factor: 3.240

Review 5.  RNA G-quadruplexes (rG4s): genomics and biological functions.

Authors:  Kaixin Lyu; Eugene Yui-Ching Chow; Xi Mou; Ting-Fung Chan; Chun Kit Kwok
Journal:  Nucleic Acids Res       Date:  2021-06-04       Impact factor: 16.971

Review 6.  Inhibition of SARS-CoV-2 by Targeting Conserved Viral RNA Structures and Sequences.

Authors:  Shalakha Hegde; Zhichao Tang; Junxing Zhao; Jingxin Wang
Journal:  Front Chem       Date:  2021-12-23       Impact factor: 5.221

7.  Identification and Structural Aspects of G-Quadruplex-Forming Sequences from the Influenza A Virus Genome.

Authors:  Maria Tomaszewska; Marta Szabat; Karolina Zielińska; Ryszard Kierzek
Journal:  Int J Mol Sci       Date:  2021-06-02       Impact factor: 5.923

8.  CNBP Binds and Unfolds In Vitro G-Quadruplexes Formed in the SARS-CoV-2 Positive and Negative Genome Strands.

Authors:  Georgina Bezzi; Ernesto J Piga; Andrés Binolfi; Pablo Armas
Journal:  Int J Mol Sci       Date:  2021-03-05       Impact factor: 5.923

9.  SARS-CoV-2 Nsp3 unique domain SUD interacts with guanine quadruplexes and G4-ligands inhibit this interaction.

Authors:  Marc Lavigne; Olivier Helynck; Pascal Rigolet; Rofia Boudria-Souilah; Mireille Nowakowski; Bruno Baron; Sébastien Brülé; Sylviane Hoos; Bertrand Raynal; Lionel Guittat; Claire Beauvineau; Stéphane Petres; Anton Granzhan; Jean Guillon; Geneviève Pratviel; Marie-Paule Teulade-Fichou; Patrick England; Jean-Louis Mergny; Hélène Munier-Lehmann
Journal:  Nucleic Acids Res       Date:  2021-07-21       Impact factor: 16.971

10.  Label-Free Fluorescence Molecular Beacon Probes Based on G-Triplex DNA and Thioflavin T for Protein Detection.

Authors:  Jun Xue; Jintao Yi; Hui Zhou
Journal:  Molecules       Date:  2021-05-17       Impact factor: 4.411

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