| Literature DB >> 32939675 |
Luca Navarini1, Francesco Caso2, Luisa Costa3, Damiano Currado4, Liliana Stola4, Fabio Perrotta5, Lorenzo Delfino6, Michela Sperti7, Marco A Deriu7, Piero Ruscitti8, Viktoriya Pavlych8, Addolorata Corrado9, Giacomo Di Benedetto10,11, Marco Tasso3, Massimo Ciccozzi12, Alice Laudisio13, Claudio Lunardi6, Francesco Paolo Cantatore9, Ennio Lubrano5, Roberto Giacomelli3,8, Raffaele Scarpa, Antonella Afeltra4.
Abstract
INTRODUCTION: The performance of seven cardiovascular (CV) risk algorithms is evaluated in a multicentric cohort of ankylosing spondylitis (AS) patients. Performance and calibration of traditional CV predictors have been compared with the novel paradigm of machine learning (ML).Entities:
Keywords: Ankylosing spondylitis; C-reactive protein; Cardiovascular risk; Machine learning
Year: 2020 PMID: 32939675 PMCID: PMC7695785 DOI: 10.1007/s40744-020-00233-4
Source DB: PubMed Journal: Rheumatol Ther ISSN: 2198-6576
Patients’ characteristics at baseline
| AS tot ( | AS without CVD ( | AS with CVD ( | p | |
|---|---|---|---|---|
| Age (years) | 46 (39–54) | 45 (38–53) | 55 (46–64) | |
| Females (%) | 45.11 | 46.96 | 33.33 | Ns |
| Disease duration (years) | 13.34 (11.34–17.89) | 12.73 (11.09–15.93) | 16.76 (13.34–21.34) | |
| HLA-B27 (%) | 42.86 | 43.48 | 38.89 | Ns |
| BASDAI | 4.25 (2.62–6.2) | 4.1 (2.6–5.64) | 6.5 (4–7.2) | |
| BASDAI < 4 (%) | 50 | 54.67 | 23.08 | 0.06 |
| BASFI | 3 (1.25–5.25) | 2.5 (0.8–4.7) | 5.4 (2.1–6) | |
| MRI sacroiliitis (%) | 90.74 | 90.53 | 92.31 | ns |
| MRI spondylitis (%) | 34.95 | 32.97 | 50 | ns |
| Syndesmophytes (%) | 31.62 | 28 | 52.94 | |
| Enthesitis (%) | 32.58 | 31.58 | 38.89 | ns |
| CRP (mg/l) | 3.2 (1.6–8) | 3 (1.36–7) | 4.4 (3–12.2) | |
| ESR (mm/h) | 21 (11–32) | 19.5 (11–31) | 24 (12–45) | ns |
| Smokers (%) | 33.83 | 32.17 | 44.44 | ns |
| CVD family history (%) | 27.07 | 24.35 | 44.44 | Ns |
| Atrial fibrillation (%) | 1.50 | 0.87 | 5.56 | ns |
| Diabetes (%) | 7.52 | 6.96 | 11.11 | ns |
| Stage 3–5 of chronic kidney disease (%) | 1.50 | 0 | 11.11 | |
| Migraine (%) | 12.03 | 13.91 | 0 | ns |
| Antipsychotics (%) | 0.75 | 0.87 | 0 | ns |
| Systolic blood pressure (mmHg) | 125 (120–140) | 127.5 (120–135) | 125 (120–140) | ns |
| SCORE | 1 (0–2) | 0 (0–1) | 2 (1–3) | |
| CUORE | 1.54 (0.06–4.54) | 1.06 (0.06–4) | 5.01 (2.01–8.06) | |
| FRS | 6.53 (2.08–13.53) | 6.01 (2.07–12.03) | 13.06 (8.03–17.07) | |
| QRISK2 | 4.01 (1.01–10.06) | 3.06 (1–8.03) | 12.06 (6.01–17) | |
| QRISK3 | 5.1 (1.4–11.4) | 4.6 (1.1–9.45) | 12 (3.5–17.1) | |
| RRS | 3 (1–5) | 3 (1–5) | 9 (4–12) | |
| ASSIGN | 6 (3–12) | 6 (3–10) | 13 (6–18) |
Data are expressed as median (25–75th percentile), unless otherwise indicated
Bold numbers indicate significant p-values
AS ankylosing spondylitis, BASDAI Bath Ankylosing Spondylitis Disease Activity Index, BASFI Bath Ankylosing Spondylitis Functional Index, CRP C-reactive protein, CVD cardiovascular disease, FRS Framingham Risk Score, MRI magnetic resonance imaging, ESR erythrocyte sedimentation rate, RRS Reynold’s Risk Score, SCORE Systematic Coronary Risk Evaluation
Fig. 1ROC curves of traditional cardiovascular risk algorithms. c-statistics scores: 0.71 (95% CI 0.52–0.87), 0.61 (95% CI 0.41–0.81), 0.66 (95% CI 0.51–0.81), 0.68 (95% CI 0.50–0.86), 0.66 (95% CI 0.48–0.84), 0.72 (95% CI 0.55–0.89), 0.67 (95% CI 0.48–0.86), 0.71 (95% CI 0.52–0.87), 0.63 (95% CI 0.44–0.83), 0.66 (95% CI 0.51–0.81), 0.68 (95% CI 0.49–0.86), 0.66 (95% CI 0.48–0.83), 0.72 (95% CI 0.55–0.89) and 0.65 (95% CI 0.46–0.85) for SCORE (a), CUORE (b), FRS (c), QRISK2 (d), QRISK3 (e), RRS (f), ASSIGN (g), SCORE*1.5 (h), CUORE*1.5 (i), FRS*1.5 (l), QRISK2-RA (m), QRISK3-RA (n), RRS*1.5 (o), and ASSIGN-RA (p)
Fig. 2Calibration plots comparing observed vs. predicted risk for SCORE (a), CUORE (b), FRS (c), QRISK2 (d), QRISK3 (e), RRS (f), ASSIGN (g), SCORE*1.5 (h), CUORE*1.5 (i), FRS*1.5 (l), QRISK2-RA (m), QRISK3-RA (n), RRS*1.5 (o), and ASSIGN-RA (p)
Sensitivity, specificity, positive predictive value (PPV), negative predictive value (NPV), and accuracy of cut-off values in traditional and adapted according to EULAR recommendations CV risk scores
| Variable | Sensitivity (%) | Specificity (%) | PPV (%) | NPV (%) | Accuracy (%) |
|---|---|---|---|---|---|
| SCORE > 1% | 76.92 (46.19–94.96) | 51.40 (41.54–61.18) | 16.13 (11.87–21.54) | 94.83 (86.98–98.05) | 54.17 (44.83–63.29) |
| CUORE > 10% | 18.18 (2.28–51.78) | 93.58 (87.22–97.38) | 22.22 (6.32–54.77) | 91.89 (89.52–93.77) | 86.67 (79.25–92.18) |
| Qrisk2 > 10% | 54.55 (23.38–83.25) | 76.47 (67.82–83.76) | 17.65 (10.25–28.68) | 94.79 (90.43–97.23) | 74.62 (66.24–81.84) |
| Qrisk3 > 10% | 54.55 (23.38–83.25) | 73.73 (64.83–81.40) | 16.22 (9.44–26.43) | 94.57 (90.03–97.10) | 72.09 (63.52–69.73) |
| FRS > 10% | 58.82 (32.92–81.56) | 66.99 (57.03–75.94) | 22.73 (15.35–32.3) | 90.79 (84.61–94.65) | 65.83 (56.62–74.24) |
| RRS > 10% | 33.33 (4.33–77.72) | 84.21 (72.13–92.52) | 18.18 (5.82–44.44) | 92.31 (87.08–95.53) | 79.37 (67.30–88.53) |
| SCORE 1.5 > 1% | 76.92 (46.19–94.96) | 51.40 (41.54–61.18) | 16.13 (11.87–21.54) | 94.83 (86.98–98.05) | 54.17 (44.83–63.29) |
| CUORE 1.5 > 10% | 27.27 (6.02–60.97) | 82.88 (74.57–89.37) | 13.64 (5.24–31.05) | 92 (88.8–94.34) | 77.87 (69.46–84.88) |
| Qrisk2-RA > 10% | 63.64 (30.79–89.07) | 69.75 (60.65–77.83) | 16.28 (10.33–24.71) | 95.40 (90.39–97.86) | 69.23 (60.54–77.02) |
| Qrisk3-RA > 10% | 54.55 (23.38–83.25) | 70.34 (61.23–78.39) | 14.63 (8.55–23.93) | 94.32 (89.58–96.97) | 68.99 (60.25–77.84) |
| FRS 1.5 > 10% | 76.47 (50.10–93.19) | 55.24 (45.22–64.95) | 21.67 (16.47–27.96) | 93.55 (85.82–97.20) | 58.20 (48.93–67.06) |
| RRS 1.5 > 10% | 66.67 (22.28–95.67) | 66.67 (52.94–78.6) | 17.39 (9.69–29.24) | 95 (85.79–98.35) | 66.67 (53.66–78.05) |
| SCORE > 5% | 15.38 (1.92–45.45) | 96.26 (90.7–98.97) | 33.33 (9.2–71.17) | 90.35 (88.1–92.21) | 87.5 (80.22–92.83) |
| CUORE > 20% | 9.09 (0.23–41.28) | 99.08 (94.99–99.98) | 50 (6.29–93.71) | 91.53 (89.95–92.87) | 90.83 (84.19–95.33) |
| Qrisk2 > 20% | 18.18 (2.28–51.78) | 92.44 (86.13–96.48) | 18.18 (5.18–47.45) | 92.44 (90.20–94.19) | 86.15 (79–91.58) |
| Qrisk3 > 20% | 18.18 (2.28–51.78) | 92.37 (86.01–96.45) | 18.18 (5.18–47.45) | 92.37 (90.12–94.14) | 86.05 (78.85–91.52) |
| FRS > 20% | 25.53 (6.81–49.9) | 89.32 (81.69–94.55) | 26.67 (11.56–50.28) | 87.62 (84.35–90.28) | 80 (71.72–86.75) |
| RRS > 20% | 0 (0–45.93) | 92.98 (83–98.05) | 0 | 89.83 (89.16–90.46) | 84.13 (72.74–92.12) |
| ASSIGN > 20% | 27.27 (6.02–60.97) | 91.38 (84.72–95.79) | 23.08(8.82–48.21) | 92.98 (90.18–95.03) | 85.83 (78.53–91.38) |
| SCORE 1.5 > 5% | 15.38 (1.92–45.45) | 96.26 (90.7–98.97) | 33.33 (9.2–71.17) | 90.35 (88.1–92.21) | 87.5 (80.22–92.83) |
| CUORE 1.5 > 20% | 9.09 (0.23–41.28) | 96.40 (91.03–99.01) | 20 (2.96–67.16) | 91.45 (89.84–92.83) | 88.52 (81.5–93.58) |
| Qrisk2-RA > 20% | 27.27 (6.02–60.97) | 89.08 (82.04–94.05) | 18.75 (7.18–40.77) | 92.98 (90.17–95.03) | 83.85 (76.37–89.71) |
| Qrisk3-RA > 20% | 27.27 (6.02–60.97) | 89.83 (82.91–94.63) | 20 (7.65–42.99) | 92.98 (90.18–95.03) | 84.5 (77.08–90.27) |
| FRS 1.5 > 20% | 52.94 (27.81–77.02) | 78.10 (68.97–85.58) | 28.13 (18.04–41.03) | 91.11 (85.97–94.49) | 74.59 (65.91–82.04) |
| RRS 1.5 > 20% | 16.67 (0.42–64.12) | 91.23 (80.70–97.09) | 16.67 (2.7–59.05) | 91.23 (87.81–93.75) | 84.13(72.74–92.12) |
| ASSIGN-RA > 20% | 36.36 (10.93–69.21) | 89.19 (81.88–94.29) | 25 (11.45–46.26) | 93.4 (90.01–95.69) | 84.43 (76.75–90.36) |
Data are expressed as percentage
FRS Framingham Score, SCORE Systematic Coronary Risk Evaluation; RRS Reynold’s Risk Score
Fig. 3ROC curves of machine learning-based cardiovascular risk algorithms. c-Statistics scores: 0.70 (95% CI 0.55–0.85) for SVM (a), 0.73 (95% CI 0.61–0.85) for RF (b), and 0.64 (95% CI 0.50–0.77) for KNN (c). Calibration plots comparing observed vs. predicted risk for KNN (d), RF (e), and SVM (f). g Random forest’s importance
Sensitivity, specificity, positive predictive value (PPV), negative predictive value (NPV), and accuracy of cut-off values in machine-learning CV risk scores
| Variable | Sensitivity (%) | Specificity (%) | PPV (%) | NPV (%) | Accuracy (%) |
|---|---|---|---|---|---|
| KNN | 77.78 (52.36–93.59) | 54.78 (45.23–64.08) | 21.21 (11.35–31.08) | 94.03 (88.36–99.7) | 57.89 (49.03–66.4) |
| SVM | 66.67 (40.99–86.66) | 60 (50.45–69.02) | 20.69 (10.26–31.11) | 92 (85.86–98.14) | 60.90 (52.07–69.24) |
| RF | 61.11 (35.75–82.70) | 66.09 (56.67–74.65) | 22 (10.52–33.48) | 91.57 (85.59–97.54) | 65.41 (56.68–73.44) |
Data are expressed as percentage
KNN k-nearest neighbor, RF random forest, SVM support vector machine
| Cardiovascular disease (CVD) represents an important cause of morbidity and mortality among patients with Ankylosing Spondylitis (AS), so of cardiovascular (CV) risk prediction has a pivotal role in these patients. |
| The currently available cardiovascular risk algorithms demonstrate only fair or moderate discriminative ability in patients with AS. |
| In this study, the performance of seven cardiovascular risk predictors is evaluated in a multicentric cohort of AS patients from Italian Rheumatology Units. Moreover, for the first time in literature, performance and calibration of traditional CV predictors have been here compared with the novel paradigm of machine learning (ML). |
| All the CV risk algorithms evaluated exhibit a poor discriminative ability, except for Reynold’s Risk Score (RRS) and Systematic Coronary Risk Evaluation (SCORE) which showed a fair performance. |
| The adaptation of CV risk algorithms according to European League Against Rheumatism (EULAR) recommendations did not provide a significant improvement in discriminative ability. |
| Patients with AS do not present, among the top features, the traditional ones used by FRS and other traditional methods; the most important variable is C-reactive protein (CRP). This is consistent with the result regarding RRS, which shows the best discriminative ability, probably because it includes CRP as a variable. |
| Machine-learning algorithms can be helpful in a better cardiovascular assessment in patients with Ankylosing Spondylitis and demonstrate that C-reactive protein can be a key feature of an increased risk in these patients. |
| Taking into account this variable in future ML studies could increase classification performances on AS patients. |