| Literature DB >> 32939303 |
Aleksej Jochim1, Rastko Radulovic1, Inke Jess1, Christian Näther1.
Abstract
During systematic investigations on the synthesis of coordination polymers with Co(NCS)2 involving different thio-urea derivatives as coligands, crystals of the title compound Co(NCS)2(N,N'-di-methyl-thio-urea)2, or [Co(C3H8N2S)2(NCS)2], were obtained. These crystals were non-merohedric twins and therefore, a twin refinement using data in HKLF-5 format was performed. In the crystal structure of this compound, the CoII cations are coordinated by two N-terminally bonded thio-cyanate anions as well as two S-bonding N,N'-di-methyl-thio-urea mol-ecules, forming two crystallographically independent discrete complexes each with a strongly distorted tetra-hedral geometry. An intricate network of inter-molecular N-H⋯S and C-H⋯S hydrogen bonds can be found between the complexes. The thermogravimetric curve of the title compound shows two discrete steps in which all coligand mol-ecules have been emitted, which is also accompanied by partial decomposition of the cobalt thio-cyanate. If the measurement is stopped after the first mass loss, only broad reflections of CoS can be found in the XRPD pattern of the residue, which proves that this compound decomposes completely upon heating. However, at lower temperatures an endothermic signal can be found in the DTA and DSC curve, which corresponds to melting, as proven by thermomicroscopy. © Jochim et al. 2020.Entities:
Keywords: N,N′-dimethylthiourea; cobalt thiocyanate; crystal structure; discrete complexes; thermal properties
Year: 2020 PMID: 32939303 PMCID: PMC7472772 DOI: 10.1107/S2056989020011111
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1View of the two crystallographically independent molecules in the asymmetric unit of the title compound with atom labeling and displacement ellipsoids drawn at the 50% probability level. Symmetry codes: (i) −x + 1, y, −z + ; (ii) −x, y, −z + .
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N11—H11⋯S1i | 0.88 | 2.65 | 3.341 (2) | 136 |
| N12—H12⋯N1 | 0.88 | 2.69 | 3.282 (3) | 126 |
| N12—H12⋯S2ii | 0.88 | 2.88 | 3.582 (2) | 138 |
| C13—H13 | 0.98 | 2.80 | 3.578 (3) | 137 |
| N21—H21⋯S1 | 0.88 | 2.61 | 3.372 (2) | 146 |
| C22—H22 | 0.98 | 3.01 | 3.591 (3) | 120 |
| C22—H22 | 0.98 | 3.02 | 3.752 (4) | 132 |
| N22—H22⋯S2v | 0.88 | 2.79 | 3.486 (3) | 137 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .
Figure 2Crystal structure of the title compound with a view of the chains that extend along [101]. Intermolecular N—H⋯S hydrogen bonding is shown as dashed lines.
Figure 3Crystal structure of the title compound with a view of the chains that extend along the a-axis direction. Intermolecular N—H⋯S and C—H⋯S hydrogen bonds are shown as dashed lines.
Figure 4Crystal structure of the title compound with a view perpendicular to the layers parallel to the crystallographic ac plane. Intermolecular N—H⋯S and C—H⋯S hydrogen bonds are shown as dashed lines.
Experimental details
| Crystal data | |
| Chemical formula | [Co(C3H8N2S)2(NCS)2] |
|
| 383.44 |
| Crystal system, space group | Monoclinic, |
| Temperature (K) | 200 |
|
| 16.8070 (8), 14.4212 (6), 15.5669 (9) |
| β (°) | 118.744 (4) |
|
| 3308.1 (3) |
|
| 8 |
| Radiation type | Mo |
| μ (mm−1) | 1.54 |
| Crystal size (mm) | 0.10 × 0.08 × 0.07 |
| Data collection | |
| Diffractometer | Stoe IPDS2 |
| No. of measured, independent and observed [ | 3218, 3218, 2767 |
| (sin θ/λ)max (Å−1) | 0.618 |
| Refinement | |
|
| 0.039, 0.105, 1.07 |
| No. of reflections | 3218 |
| No. of parameters | 178 |
| H-atom treatment | H-atom parameters constrained |
| Δρmax, Δρmin (e Å−3) | 0.72, −0.40 |
Computer programs: X-AREA and XP (Stoe & Cie, 2002 ▸), SHELXS97 (Sheldrick, 2008 ▸), SHELXL2018/3 (Sheldrick, 2015 ▸), DIAMOND (Brandenburg & Putz, 1999 ▸) and publCIF (Westrip, 2010 ▸).
| [Co(C3H8N2S)2(NCS)2] | |
| Monoclinic, | Mo |
| Cell parameters from 3218 reflections | |
| θ = 2.0–26.0° | |
| µ = 1.54 mm−1 | |
| β = 118.744 (4)° | |
| Block, blue | |
| 0.10 × 0.08 × 0.07 mm |
| Stoe IPDS-2 diffractometer | θmax = 26.0°, θmin = 2.0° |
| ω scans | |
| 3218 measured reflections | |
| 3218 independent reflections | |
| 2767 reflections with |
| Refinement on | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: mixed |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 3218 reflections | Δρmax = 0.72 e Å−3 |
| 178 parameters | Δρmin = −0.40 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refined as a 2-component twin. |
| Co1 | 0.500000 | 0.35611 (3) | 0.750000 | 0.04070 (15) | |
| Co2 | 0.000000 | 0.64084 (3) | 0.250000 | 0.04322 (15) | |
| N1 | 0.38555 (14) | 0.28706 (15) | 0.69242 (15) | 0.0454 (5) | |
| C1 | 0.30981 (16) | 0.26507 (16) | 0.65171 (17) | 0.0399 (5) | |
| S1 | 0.20412 (4) | 0.23531 (6) | 0.59318 (5) | 0.0602 (2) | |
| N2 | 0.11433 (14) | 0.70960 (15) | 0.30776 (16) | 0.0488 (5) | |
| C2 | 0.19017 (16) | 0.73153 (16) | 0.34319 (17) | 0.0414 (5) | |
| S2 | 0.29563 (4) | 0.76089 (6) | 0.39174 (6) | 0.0609 (2) | |
| S11 | 0.52044 (4) | 0.43897 (5) | 0.88607 (5) | 0.05212 (19) | |
| C11 | 0.41958 (16) | 0.49900 (16) | 0.84464 (17) | 0.0404 (5) | |
| N11 | 0.41916 (14) | 0.58993 (14) | 0.85125 (16) | 0.0464 (5) | |
| H11 | 0.366818 | 0.618316 | 0.831086 | 0.056* | |
| C12 | 0.5004 (2) | 0.64714 (19) | 0.8938 (3) | 0.0603 (7) | |
| H12A | 0.539073 | 0.629383 | 0.962335 | 0.090* | |
| H12B | 0.483201 | 0.712509 | 0.890419 | 0.090* | |
| H12C | 0.533658 | 0.638091 | 0.857165 | 0.090* | |
| N12 | 0.34179 (14) | 0.45328 (15) | 0.80762 (17) | 0.0525 (5) | |
| H12 | 0.346693 | 0.392461 | 0.809838 | 0.063* | |
| C13 | 0.25300 (16) | 0.4945 (2) | 0.7730 (2) | 0.0596 (7) | |
| H13A | 0.247660 | 0.518724 | 0.828810 | 0.089* | |
| H13B | 0.206126 | 0.447472 | 0.738940 | 0.089* | |
| H13C | 0.245126 | 0.545309 | 0.727713 | 0.089* | |
| S21 | −0.01638 (5) | 0.55786 (6) | 0.36690 (6) | 0.0628 (2) | |
| C21 | 0.08297 (16) | 0.49509 (18) | 0.42795 (17) | 0.0448 (5) | |
| N21 | 0.08038 (14) | 0.40531 (15) | 0.43729 (16) | 0.0494 (5) | |
| H21 | 0.131208 | 0.377325 | 0.478147 | 0.059* | |
| C22 | −0.0021 (2) | 0.3505 (2) | 0.3986 (3) | 0.0710 (9) | |
| H22A | −0.037573 | 0.369132 | 0.430511 | 0.107* | |
| H22B | 0.013644 | 0.284667 | 0.411331 | 0.107* | |
| H22C | −0.037934 | 0.360733 | 0.327816 | 0.107* | |
| N22 | 0.16179 (14) | 0.53884 (16) | 0.46741 (18) | 0.0562 (6) | |
| H22 | 0.158916 | 0.599750 | 0.468078 | 0.067* | |
| C23 | 0.24956 (16) | 0.4953 (2) | 0.5241 (2) | 0.0584 (7) | |
| H23A | 0.254623 | 0.471054 | 0.585312 | 0.088* | |
| H23B | 0.297563 | 0.541035 | 0.538953 | 0.088* | |
| H23C | 0.255899 | 0.444206 | 0.486232 | 0.088* |
| Co1 | 0.0279 (2) | 0.0390 (3) | 0.0494 (3) | 0.000 | 0.0138 (2) | 0.000 |
| Co2 | 0.0258 (2) | 0.0420 (3) | 0.0532 (3) | 0.000 | 0.0121 (2) | 0.000 |
| N1 | 0.0382 (11) | 0.0428 (11) | 0.0500 (11) | −0.0038 (9) | 0.0171 (9) | 0.0013 (9) |
| C1 | 0.0369 (12) | 0.0355 (11) | 0.0441 (11) | −0.0007 (9) | 0.0169 (10) | 0.0046 (9) |
| S1 | 0.0349 (4) | 0.0658 (5) | 0.0642 (4) | −0.0127 (3) | 0.0112 (3) | 0.0176 (3) |
| N2 | 0.0359 (11) | 0.0480 (12) | 0.0564 (12) | −0.0041 (9) | 0.0173 (9) | −0.0074 (9) |
| C2 | 0.0343 (12) | 0.0383 (12) | 0.0472 (12) | −0.0009 (9) | 0.0162 (10) | −0.0027 (10) |
| S2 | 0.0338 (4) | 0.0657 (5) | 0.0756 (5) | −0.0133 (3) | 0.0202 (3) | −0.0155 (4) |
| S11 | 0.0319 (3) | 0.0517 (4) | 0.0584 (4) | 0.0053 (3) | 0.0103 (3) | −0.0126 (3) |
| C11 | 0.0342 (12) | 0.0430 (13) | 0.0427 (11) | −0.0007 (9) | 0.0174 (10) | −0.0042 (9) |
| N11 | 0.0359 (10) | 0.0408 (11) | 0.0594 (12) | 0.0012 (8) | 0.0204 (9) | 0.0004 (9) |
| C12 | 0.0480 (16) | 0.0447 (15) | 0.0811 (19) | −0.0081 (12) | 0.0252 (14) | 0.0004 (13) |
| N12 | 0.0337 (11) | 0.0430 (11) | 0.0722 (14) | −0.0023 (9) | 0.0185 (10) | −0.0081 (10) |
| C13 | 0.0315 (15) | 0.065 (2) | 0.0759 (18) | 0.0008 (11) | 0.0205 (13) | −0.0055 (14) |
| S21 | 0.0330 (3) | 0.0697 (5) | 0.0821 (5) | 0.0105 (3) | 0.0248 (3) | 0.0292 (4) |
| C21 | 0.0336 (12) | 0.0530 (15) | 0.0435 (12) | −0.0003 (10) | 0.0152 (10) | 0.0039 (10) |
| N21 | 0.0381 (11) | 0.0438 (12) | 0.0560 (12) | −0.0009 (9) | 0.0145 (10) | −0.0041 (9) |
| C22 | 0.0503 (18) | 0.0550 (18) | 0.094 (2) | −0.0149 (14) | 0.0233 (16) | −0.0172 (16) |
| N22 | 0.0337 (11) | 0.0455 (12) | 0.0771 (15) | 0.0016 (9) | 0.0169 (11) | 0.0117 (11) |
| C23 | 0.0309 (15) | 0.061 (2) | 0.0665 (16) | 0.0046 (11) | 0.0103 (12) | 0.0036 (13) |
| Co1—N1i | 1.959 (2) | C2—S2 | 1.614 (2) |
| Co1—N1 | 1.959 (2) | S11—C11 | 1.728 (2) |
| Co1—S11 | 2.3093 (7) | C11—N11 | 1.316 (3) |
| Co1—S11i | 2.3093 (7) | C11—N12 | 1.323 (3) |
| Co2—N2ii | 1.955 (2) | N11—C12 | 1.454 (4) |
| Co2—N2 | 1.955 (2) | N12—C13 | 1.448 (3) |
| Co2—S21 | 2.3024 (8) | S21—C21 | 1.728 (3) |
| Co2—S21ii | 2.3024 (8) | C21—N21 | 1.306 (3) |
| N1—C1 | 1.161 (3) | C21—N22 | 1.322 (3) |
| C1—S1 | 1.616 (2) | N21—C22 | 1.451 (4) |
| N2—C2 | 1.163 (3) | N22—C23 | 1.448 (3) |
| N1i—Co1—N1 | 118.89 (13) | C2—N2—Co2 | 165.2 (2) |
| N1i—Co1—S11 | 99.39 (6) | N2—C2—S2 | 179.3 (2) |
| N1—Co1—S11 | 111.28 (6) | C11—S11—Co1 | 103.32 (8) |
| N1i—Co1—S11i | 111.28 (6) | N11—C11—N12 | 119.3 (2) |
| N1—Co1—S11i | 99.39 (6) | N11—C11—S11 | 120.75 (18) |
| S11—Co1—S11i | 117.68 (4) | N12—C11—S11 | 119.95 (18) |
| N2ii—Co2—N2 | 119.05 (13) | C11—N11—C12 | 124.2 (2) |
| N2ii—Co2—S21 | 99.35 (7) | C11—N12—C13 | 125.6 (2) |
| N2—Co2—S21 | 111.39 (7) | C21—S21—Co2 | 104.82 (8) |
| N2ii—Co2—S21ii | 111.39 (7) | N21—C21—N22 | 120.1 (2) |
| N2—Co2—S21ii | 99.35 (7) | N21—C21—S21 | 120.37 (18) |
| S21—Co2—S21ii | 117.37 (5) | N22—C21—S21 | 119.5 (2) |
| C1—N1—Co1 | 165.2 (2) | C21—N21—C22 | 124.8 (2) |
| N1—C1—S1 | 178.9 (2) | C21—N22—C23 | 125.1 (2) |
| H··· | ||||
| N11—H11···S1iii | 0.88 | 2.65 | 3.341 (2) | 136 |
| N12—H12···N1 | 0.88 | 2.69 | 3.282 (3) | 126 |
| N12—H12···S2iv | 0.88 | 2.88 | 3.582 (2) | 138 |
| C13—H13 | 0.98 | 2.80 | 3.578 (3) | 137 |
| N21—H21···S1 | 0.88 | 2.61 | 3.372 (2) | 146 |
| C22—H22 | 0.98 | 3.01 | 3.591 (3) | 120 |
| C22—H22 | 0.98 | 3.02 | 3.752 (4) | 132 |
| N22—H22···S2vii | 0.88 | 2.79 | 3.486 (3) | 137 |