Literature DB >> 32937655

Unique contributions of chlorophyll and nitrogen to predict crop photosynthetic capacity from leaf spectroscopy.

Sheng Wang1,2, Kaiyu Guan1,2,3, Zhihui Wang4, Elizabeth A Ainsworth1,2,5,6, Ting Zheng4, Philip A Townsend4, Kaiyuan Li1,2, Christopher Moller5, Genghong Wu1,2, Chongya Jiang1,2.   

Abstract

The photosynthetic capacity or the CO2-saturated photosynthetic rate (Vmax), chlorophyll, and nitrogen are closely linked leaf traits that determine C4 crop photosynthesis and yield. Accurate, timely, rapid, and non-destructive approaches to predict leaf photosynthetic traits from hyperspectral reflectance are urgently needed for high-throughput crop monitoring to ensure food and bioenergy security. Therefore, this study thoroughly evaluated the state-of-the-art physically based radiative transfer models (RTMs), data-driven partial least squares regression (PLSR), and generalized PLSR (gPLSR) models to estimate leaf traits from leaf-clip hyperspectral reflectance, which was collected from maize (Zea mays L.) bioenergy plots with diverse genotypes, growth stages, treatments with nitrogen fertilizers, and ozone stresses in three growing seasons. The results show that leaf RTMs considering bidirectional effects can give accurate estimates of chlorophyll content (Pearson correlation r=0.95), while gPLSR enabled retrieval of leaf nitrogen concentration (r=0.85). Using PLSR with field measurements for training, the cross-validation indicates that Vmax can be well predicted from spectra (r=0.81). The integration of chlorophyll content (strongly related to visible spectra) and nitrogen concentration (linked to shortwave infrared signals) can provide better predictions of Vmax (r=0.71) than only using either chlorophyll or nitrogen individually. This study highlights that leaf chlorophyll content and nitrogen concentration have key and unique contributions to Vmax prediction. Published by Oxford University Press on behalf of the Society for Experimental Biology 2020.

Entities:  

Keywords:  Bioenergy crop; CO2-saturated photosynthetic rate; chlorophyll; hyperspectral leaf reflectance; maize; nitrogen; partial least squares regression; radiative transfer model

Mesh:

Substances:

Year:  2021        PMID: 32937655     DOI: 10.1093/jxb/eraa432

Source DB:  PubMed          Journal:  J Exp Bot        ISSN: 0022-0957            Impact factor:   6.992


  5 in total

Review 1.  Machine learning methods for assessing photosynthetic activity: environmental monitoring applications.

Authors:  S S Khruschev; T Yu Plyusnina; T K Antal; S I Pogosyan; G Yu Riznichenko; A B Rubin
Journal:  Biophys Rev       Date:  2022-08-10

Review 2.  Advances in field-based high-throughput photosynthetic phenotyping.

Authors:  Peng Fu; Christopher M Montes; Matthew H Siebers; Nuria Gomez-Casanovas; Justin M McGrath; Elizabeth A Ainsworth; Carl J Bernacchi
Journal:  J Exp Bot       Date:  2022-05-23       Impact factor: 7.298

3.  Unsupervised analysis of NIRS spectra to assess complex plant traits: leaf senescence as a use case.

Authors:  Héloïse Villesseche; Martin Ecarnot; Elsa Ballini; Ryad Bendoula; Nathalie Gorretta; Pierre Roumet
Journal:  Plant Methods       Date:  2022-08-12       Impact factor: 5.827

Review 4.  Hyperspectral reflectance-based phenotyping for quantitative genetics in crops: Progress and challenges.

Authors:  Marcin Grzybowski; Nuwan K Wijewardane; Abbas Atefi; Yufeng Ge; James C Schnable
Journal:  Plant Commun       Date:  2021-05-27

5.  Using hyperspectral leaf reflectance to estimate photosynthetic capacity and nitrogen content across eastern cottonwood and hybrid poplar taxa.

Authors:  Thu Ya Kyaw; Courtney M Siegert; Padmanava Dash; Krishna P Poudel; Justin J Pitts; Heidi J Renninger
Journal:  PLoS One       Date:  2022-03-10       Impact factor: 3.240

  5 in total

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