Literature DB >> 32927062

Optogenetic TDP-43 nucleation induces persistent insoluble species and progressive motor dysfunction in vivo.

Charlton G Otte1, Tyler R Fortuna2, Jacob R Mann3, Amanda M Gleixner4, Nandini Ramesh2, Noah J Pyles1, Udai B Pandey5, Christopher J Donnelly6.   

Abstract

TDP-43 is a predominantly nuclear DNA/RNA binding protein that is often mislocalized into insoluble cytoplasmic inclusions in post-mortem patient tissue in a variety of neurodegenerative disorders including Amyotrophic Lateral Sclerosis (ALS) and Frontotemporal dementia (FTD). The underlying causes of TDP-43 proteinopathies remain unclear, but recent studies indicate the formation of these protein assemblies is driven by aberrant phase transitions of RNA deficient TDP-43. Technical limitations have prevented our ability to understand how TDP-43 proteinopathy relates to disease pathogenesis. Current animal models of TDP-43 proteinopathy often rely on overexpression of wild-type TDP-43 to non-physiological levels that may initiate neurotoxicity through nuclear gain of function mechanisms, or by the expression of disease-causing mutations found in only a fraction of ALS patients. New technologies allowing for light-responsive control of subcellular protein crowding provide a promising approach to drive intracellular protein aggregation, as we have previously demonstrated in vitro. Here we present a model for the optogenetic induction of TDP-43 proteinopathy in Drosophila that recapitulates key features of patient pathology, including detergent insoluble cytoplamsic inclusions and progressive motor dysfunction.
Copyright © 2020. Published by Elsevier Inc.

Entities:  

Keywords:  ALS/FTD; LATE; Neurodegeneration; RNA binding proteins; TDP-43; optoTDP43

Mesh:

Substances:

Year:  2020        PMID: 32927062      PMCID: PMC9040199          DOI: 10.1016/j.nbd.2020.105078

Source DB:  PubMed          Journal:  Neurobiol Dis        ISSN: 0969-9961            Impact factor:   7.046


  48 in total

1.  Spatiotemporal Control of Intracellular Phase Transitions Using Light-Activated optoDroplets.

Authors:  Yongdae Shin; Joel Berry; Nicole Pannucci; Mikko P Haataja; Jared E Toettcher; Clifford P Brangwynne
Journal:  Cell       Date:  2016-12-29       Impact factor: 41.582

2.  Cytoplasmic TDP-43 De-mixing Independent of Stress Granules Drives Inhibition of Nuclear Import, Loss of Nuclear TDP-43, and Cell Death.

Authors:  Fatima Gasset-Rosa; Shan Lu; Haiyang Yu; Cong Chen; Ze'ev Melamed; Lin Guo; James Shorter; Sandrine Da Cruz; Don W Cleveland
Journal:  Neuron       Date:  2019-03-07       Impact factor: 17.173

3.  RNA Binding Antagonizes Neurotoxic Phase Transitions of TDP-43.

Authors:  Jacob R Mann; Amanda M Gleixner; Jocelyn C Mauna; Edward Gomes; Michael R DeChellis-Marks; Patrick G Needham; Katie E Copley; Bryan Hurtle; Bede Portz; Noah J Pyles; Lin Guo; Christopher B Calder; Zachary P Wills; Udai B Pandey; Julia K Kofler; Jeffrey L Brodsky; Amantha Thathiah; James Shorter; Christopher J Donnelly
Journal:  Neuron       Date:  2019-02-27       Impact factor: 17.173

4.  Both cytoplasmic and nuclear accumulations of the protein are neurotoxic in Drosophila models of TDP-43 proteinopathies.

Authors:  Laetitia Miguel; Thierry Frébourg; Dominique Campion; Magalie Lecourtois
Journal:  Neurobiol Dis       Date:  2010-10-14       Impact factor: 5.996

5.  A Drosophila model for TDP-43 proteinopathy.

Authors:  Yan Li; Payal Ray; Elizabeth J Rao; Chen Shi; Weirui Guo; Xiaoping Chen; Elvin A Woodruff; Kazuo Fushimi; Jane Y Wu
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-26       Impact factor: 11.205

6.  Tar DNA binding protein-43 (TDP-43) associates with stress granules: analysis of cultured cells and pathological brain tissue.

Authors:  Liqun Liu-Yesucevitz; Aylin Bilgutay; Yong-Jie Zhang; Tara Vanderweyde; Tara Vanderwyde; Allison Citro; Tapan Mehta; Nava Zaarur; Ann McKee; Robert Bowser; Michael Sherman; Leonard Petrucelli; Benjamin Wolozin
Journal:  PLoS One       Date:  2010-10-11       Impact factor: 3.240

7.  TDP-43 Promotes Neurodegeneration by Impairing Chromatin Remodeling.

Authors:  Amit Berson; Ashley Sartoris; Raffaella Nativio; Vivianna Van Deerlin; Jon B Toledo; Sílvia Porta; Shichong Liu; Chia-Yu Chung; Benjamin A Garcia; Virginia M-Y Lee; John Q Trojanowski; F Brad Johnson; Shelley L Berger; Nancy M Bonini
Journal:  Curr Biol       Date:  2017-11-16       Impact factor: 10.834

8.  Axonal transport of TDP-43 mRNA granules is impaired by ALS-causing mutations.

Authors:  Nael H Alami; Rebecca B Smith; Monica A Carrasco; Luis A Williams; Christina S Winborn; Steve S W Han; Evangelos Kiskinis; Brett Winborn; Brian D Freibaum; Anderson Kanagaraj; Alison J Clare; Nisha M Badders; Bilada Bilican; Edward Chaum; Siddharthan Chandran; Christopher E Shaw; Kevin C Eggan; Tom Maniatis; J Paul Taylor
Journal:  Neuron       Date:  2014-02-05       Impact factor: 17.173

9.  An optimized optogenetic clustering tool for probing protein interaction and function.

Authors:  Amir Taslimi; Justin D Vrana; Daniel Chen; Sofya Borinskaya; Bruce J Mayer; Matthew J Kennedy; Chandra L Tucker
Journal:  Nat Commun       Date:  2014-09-18       Impact factor: 14.919

10.  A novel Drosophila model of TDP-43 proteinopathies: N-terminal sequences combined with the Q/N domain induce protein functional loss and locomotion defects.

Authors:  Simona Langellotti; Valentina Romano; Giulia Romano; Raffaella Klima; Fabian Feiguin; Lucia Cragnaz; Maurizio Romano; Francisco E Baralle
Journal:  Dis Model Mech       Date:  2016-04-21       Impact factor: 5.758

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  5 in total

Review 1.  Emerging Therapies and Novel Targets for TDP-43 Proteinopathy in ALS/FTD.

Authors:  Lindsey R Hayes; Petr Kalab
Journal:  Neurotherapeutics       Date:  2022-07-05       Impact factor: 6.088

2.  NUP62 localizes to ALS/FTLD pathological assemblies and contributes to TDP-43 insolubility.

Authors:  Amanda M Gleixner; Brandie Morris Verdone; Charlton G Otte; Eric N Anderson; Nandini Ramesh; Olivia R Shapiro; Jenna R Gale; Jocelyn C Mauna; Jacob R Mann; Katie E Copley; Elizabeth L Daley; Juan A Ortega; Maria Elena Cicardi; Evangelos Kiskinis; Julia Kofler; Udai B Pandey; Davide Trotti; Christopher J Donnelly
Journal:  Nat Commun       Date:  2022-06-13       Impact factor: 17.694

Review 3.  Illuminating ALS Motor Neurons With Optogenetics in Zebrafish.

Authors:  Kazuhide Asakawa; Hiroshi Handa; Koichi Kawakami
Journal:  Front Cell Dev Biol       Date:  2021-03-18

Review 4.  Modulating biomolecular condensates: a novel approach to drug discovery.

Authors:  Diana M Mitrea; Matthäus Mittasch; Beatriz Ferreira Gomes; Isaac A Klein; Mark A Murcko
Journal:  Nat Rev Drug Discov       Date:  2022-08-16       Impact factor: 112.288

Review 5.  Optogenetic approaches for understanding homeostatic and degenerative processes in Drosophila.

Authors:  Wen Kin Lim; Prameet Kaur; Huanyan Huang; Richard Shim Jo; Anupriya Ramamoorthy; Li Fang Ng; Jahnavi Suresh; Fahrisa Islam Maisha; Ajay S Mathuru; Nicholas S Tolwinski
Journal:  Cell Mol Life Sci       Date:  2021-07-07       Impact factor: 9.261

  5 in total

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