Literature DB >> 32926465

Construction and analysis of the protein-protein interaction network for the olfactory system of the silkworm Bombyx mori.

Shanghong Xin1, Wenjun Zhang1.   

Abstract

Olfaction plays an essential role in feeding and information exchange in insects. Previous studies on the olfaction of silkworms have provided a wealth of information about genes and proteins, yet, most studies have only focused on a single gene or protein related to the insect's olfaction. The aim of the current study is to determine key proteins in the olfactory system of the silkworm, and further understand protein-protein interactions (PPIs) in the olfactory system of Lepidoptera. To achieve this goal, we integrated Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and network analyses. Furthermore, we selected 585 olfactory-related proteins and constructed a (PPI) network for the olfactory system of the silkworm. Network analysis led to the identification of several key proteins, including GSTz1, LOC733095, BGIBMGA002169-TA, BGIBMGA010939-TA, GSTs2, GSTd2, Or-2, and BGIBMGA013255-TA. A comprehensive evaluation of the proteins showed that glutathione S-transferases (GSTs) had the highest ranking. GSTs also had the highest enrichment levels in GO and KEGG. In conclusion, our analysis showed that key nodes in the biological network had a significant impact on the network, and the key proteins identified via network analysis could serve as new research targets to determine their functions in olfaction.
© 2020 Wiley Periodicals LLC.

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Keywords:  glutathione S-transferase; network analysis; olfaction; protein-protein interaction network; silkworm

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Year:  2020        PMID: 32926465     DOI: 10.1002/arch.21737

Source DB:  PubMed          Journal:  Arch Insect Biochem Physiol        ISSN: 0739-4462            Impact factor:   1.698


  2 in total

1.  Identification of key genes and signaling pathways related to Hetian sheep wool density by RNA-seq technology.

Authors:  Ruijun Shi; Shuwei Li; Penggang Liu; Shuhui Zhang; Zhenhui Wu; Tinghui Wu; Shujuan Gong; Yu Wan
Journal:  PLoS One       Date:  2022-05-25       Impact factor: 3.752

2.  Identification of sex-biased and neurodevelopment genes via brain transcriptome in Ostrinia furnacalis.

Authors:  Yajun Chang; Bin Yang; Yu Zhang; Chenxi Dong; Lei Liu; Xincheng Zhao; Guirong Wang
Journal:  Front Physiol       Date:  2022-08-08       Impact factor: 4.755

  2 in total

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