Literature DB >> 32924072

Development of an improved Amplex Red peroxidation activity assay for screening cytochrome P450 variants and identification of a novel mutant of the thermophilic CYP119.

M Semih Başlar1, Tuğçe Sakallı2, Gülce Güralp1, Ekin Kestevur Doğru1, Emre Haklı2, Nur Basak Surmeli3.   

Abstract

Biocatalysts are increasingly utilized in the synthesis of drugs and agrochemicals as an alternative to chemical catalysis. They are preferred in the synthesis of enantiopure products due to their high regioselectivity and enantioselectivity. Cytochrome P450 (P450) oxygenases are valuable biocatalysts, since they catalyze the oxidation of carbon-hydrogen bonds with high efficiency and selectivity. However, practical use of P450s is limited due to their need for expensive cofactors and electron transport partners. P450s can employ hydrogen peroxide (H2O2) as an oxygen and electron donor, but the reaction with H2O2 is inefficient. The development of P450s that can use H2O2 will expand their applications. Here, an assay that utilizes Amplex Red peroxidation, to rapidly screen H2O2-dependent activity of P450 mutants in cell lysate was developed. This assay was employed to identify mutants of CYP119, a thermophilic P450 from Sulfolobus acidocaldarius, with increased peroxidation activity. A mutant library of CYP119 containing substitutions in the heme active site was constructed via combinatorial active-site saturation test and screened for improved activity. Screening of 158 colonies led to five mutants with higher activity. Among improved variants, T213R/T214I was characterized. T213R/T214I exhibited fivefold higher kcat for Amplex Red peroxidation and twofold higher kcat for styrene epoxidation. T213R/T214I showed higher stability towards heme degradation by H2O2. While the Km for H2O2 and styrene were not altered by the mutation, a fourfold decrease in the affinity for another substrate, lauric acid, was observed. In conclusion, Amplex Red peroxidation screening of CYP119 mutants yielded enzymes with increased peroxide-dependent activity.

Entities:  

Keywords:  Biocatalysis; Cytochrome; Enzyme kinetics; Heme; Protein engineering

Mesh:

Substances:

Year:  2020        PMID: 32924072     DOI: 10.1007/s00775-020-01816-w

Source DB:  PubMed          Journal:  J Biol Inorg Chem        ISSN: 0949-8257            Impact factor:   3.358


  31 in total

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Journal:  Nature       Date:  1999-06-17       Impact factor: 49.962

2.  Structural and functional characterization of "laboratory evolved" cytochrome P450cam mutants showing enhanced naphthalene oxygenation activity.

Authors:  Koji Matsuura; Takehiko Tosha; Shiro Yoshioka; Satoshi Takahashi; Koichiro Ishimori; Isao Morishima
Journal:  Biochem Biophys Res Commun       Date:  2004-10-29       Impact factor: 3.575

Review 3.  Improving and repurposing biocatalysts via directed evolution.

Authors:  Carl A Denard; Hengqian Ren; Huimin Zhao
Journal:  Curr Opin Chem Biol       Date:  2015-01-08       Impact factor: 8.822

Review 4.  The monooxygenase, peroxidase, and peroxygenase properties of cytochrome P450.

Authors:  Eugene G Hrycay; Stelvio M Bandiera
Journal:  Arch Biochem Biophys       Date:  2012-01-13       Impact factor: 4.013

Review 5.  Peroxygenase reactions catalyzed by cytochromes P450.

Authors:  Osami Shoji; Yoshihito Watanabe
Journal:  J Biol Inorg Chem       Date:  2014-02-06       Impact factor: 3.358

6.  Self-sufficient biosynthesis of pregnenolone and progesterone in engineered yeast.

Authors:  C Duport; R Spagnoli; E Degryse; D Pompon
Journal:  Nat Biotechnol       Date:  1998-02       Impact factor: 54.908

Review 7.  Microbial production of building block chemicals and polymers.

Authors:  Jeong Wook Lee; Hyun Uk Kim; Sol Choi; Jongho Yi; Sang Yup Lee
Journal:  Curr Opin Biotechnol       Date:  2011-03-17       Impact factor: 9.740

8.  Single-step fermentative production of the cholesterol-lowering drug pravastatin via reprogramming of Penicillium chrysogenum.

Authors:  Kirsty J McLean; Marcus Hans; Ben Meijrink; Wibo B van Scheppingen; Aad Vollebregt; Kang Lan Tee; Jan-Metske van der Laan; David Leys; Andrew W Munro; Marco A van den Berg
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-17       Impact factor: 11.205

9.  Total biosynthesis of hydrocortisone from a simple carbon source in yeast.

Authors:  Florence Ménard Szczebara; Cathy Chandelier; Coralie Villeret; Amélie Masurel; Stéphane Bourot; Catherine Duport; Sophie Blanchard; Agnès Groisillier; Eric Testet; Patricia Costaglioli; Gilles Cauet; Eric Degryse; David Balbuena; Jacques Winter; Tilman Achstetter; Roberto Spagnoli; Denis Pompon; Bruno Dumas
Journal:  Nat Biotechnol       Date:  2003-01-06       Impact factor: 54.908

10.  Selective steroid oxyfunctionalisation by CYP154C5, a bacterial cytochrome P450.

Authors:  Paula Bracco; Dick B Janssen; Anett Schallmey
Journal:  Microb Cell Fact       Date:  2013-10-17       Impact factor: 5.328

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