Literature DB >> 32916022

Novel RPL13 Variants and Variable Clinical Expressivity in a Human Ribosomopathy With Spondyloepimetaphyseal Dysplasia.

Francesca Tonelli1, Helena Valta2, Antonella Forlino1, Tae-Joon Cho3, Outi Mäkitie4,2,5,6, Alice Costantini4, Jessica J Alm4, Céline Huber7, Anh N Tran8, Valentina Daponte1, Nadi Kirova4, Yong-Uk Kwon9, Jung Yun Bae10, Woo Yeong Chung11, Shengjiang Tan12,13,14, Yves Sznajer15, Gen Nishimura16, Tuomas Näreoja8, Alan J Warren12,13,14, Valérie Cormier-Daire7, Ok-Hwa Kim17.   

Abstract

Spondyloepimetaphyseal dysplasias (SEMDs) are a heterogeneous group of disorders with variable growth failure and skeletal impairments affecting the spine and long bone epiphyses and metaphyses. Here we report on four unrelated families with SEMD in which we identified two monoallelic missense variants and one monoallelic splice site variant in RPL13, encoding the ribosomal protein eL13. In two out of four families, we observed autosomal dominant inheritance with incomplete penetrance and variable clinical expressivity; the phenotypes of the mutation-positive subjects ranged from normal height with or without hip dysplasia to severe SEMD with severe short stature and marked skeletal dysplasia. In vitro studies on patient-derived dermal fibroblasts harboring RPL13 missense mutations demonstrated normal eL13 expression, with proper subcellular localization but reduced colocalization with eL28 (p < 0.001). Cellular functional defects in fibroblasts from mutation-positive subjects indicated a significant increase in the ratio of 60S subunits to 80S ribosomes (p = 0.007) and attenuated global translation (p = 0.017). In line with the human phenotype, our rpl13 mutant zebrafish model, generated by CRISPR-Cas9 editing, showed cartilage deformities at embryonic and juvenile stages. These findings extend the genetic spectrum of RPL13 mutations causing this novel human ribosomopathy with variable skeletal features. Our study underscores for the first time incomplete penetrance and broad phenotypic variability in SEMD-RPL13 type and confirms impaired ribosomal function. Furthermore, the newly generated rpl13 mutant zebrafish model corroborates the role of eL13 in skeletogenesis.
© 2020 The Authors. Journal of Bone and Mineral Research published by Wiley Periodicals LLC on behalf of American Society for Bone and Mineral Research (ASBMR).. © 2020 The Authors. Journal of Bone and Mineral Research published by Wiley Periodicals LLC on behalf of American Society for Bone and Mineral Research (ASBMR).

Entities:  

Keywords:  CRISPR-CAS9; INCOMPLETE PENETRANCE; RIBOSOMOPATHY; RPL13; SPONDYLOEPIMETAPHYSEAL DYSPLASIA; VARIABLE EXPRESSIVITY; ZEBRAFISH

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Year:  2020        PMID: 32916022      PMCID: PMC7988564          DOI: 10.1002/jbmr.4177

Source DB:  PubMed          Journal:  J Bone Miner Res        ISSN: 0884-0431            Impact factor:   6.741


  52 in total

1.  The Genetic Landscape of Diamond-Blackfan Anemia.

Authors:  Jacob C Ulirsch; Jeffrey M Verboon; Shideh Kazerounian; Michael H Guo; Daniel Yuan; Leif S Ludwig; Robert E Handsaker; Nour J Abdulhay; Claudia Fiorini; Giulio Genovese; Elaine T Lim; Aaron Cheng; Beryl B Cummings; Katherine R Chao; Alan H Beggs; Casie A Genetti; Colin A Sieff; Peter E Newburger; Edyta Niewiadomska; Michal Matysiak; Adrianna Vlachos; Jeffrey M Lipton; Eva Atsidaftos; Bertil Glader; Anupama Narla; Pierre-Emmanuel Gleizes; Marie-Françoise O'Donohue; Nathalie Montel-Lehry; David J Amor; Steven A McCarroll; Anne H O'Donnell-Luria; Namrata Gupta; Stacey B Gabriel; Daniel G MacArthur; Eric S Lander; Monkol Lek; Lydie Da Costa; David G Nathan; Andrei A Korostelev; Ron Do; Vijay G Sankaran; Hanna T Gazda
Journal:  Am J Hum Genet       Date:  2018-11-29       Impact factor: 11.025

Review 2.  Short and tall stature: a new paradigm emerges.

Authors:  Jeffrey Baron; Lars Sävendahl; Francesco De Luca; Andrew Dauber; Moshe Phillip; Jan M Wit; Ola Nilsson
Journal:  Nat Rev Endocrinol       Date:  2015-10-06       Impact factor: 43.330

3.  TCOF1 gene encodes a putative nucleolar phosphoprotein that exhibits mutations in Treacher Collins Syndrome throughout its coding region.

Authors:  C A Wise; L C Chiang; W A Paznekas; M Sharma; M M Musy; J A Ashley; M Lovett; E W Jabs
Journal:  Proc Natl Acad Sci U S A       Date:  1997-04-01       Impact factor: 11.205

4.  Aging and cultured human skin fibroblasts.

Authors:  E L Schneider
Journal:  J Invest Dermatol       Date:  1979-07       Impact factor: 8.551

5.  Normal table of postembryonic zebrafish development: staging by externally visible anatomy of the living fish.

Authors:  David M Parichy; Michael R Elizondo; Margaret G Mills; Tiffany N Gordon; Raymond E Engeszer
Journal:  Dev Dyn       Date:  2009-12       Impact factor: 3.780

6.  Structures of the human and Drosophila 80S ribosome.

Authors:  Andreas M Anger; Jean-Paul Armache; Otto Berninghausen; Michael Habeck; Marion Subklewe; Daniel N Wilson; Roland Beckmann
Journal:  Nature       Date:  2013-05-02       Impact factor: 49.962

7.  EFL1 mutations impair eIF6 release to cause Shwachman-Diamond syndrome.

Authors:  Shengjiang Tan; Laëtitia Kermasson; Angela Hoslin; Pekka Jaako; Alexandre Faille; Abraham Acevedo-Arozena; Etienne Lengline; Dana Ranta; Maryline Poirée; Odile Fenneteau; Hubert Ducou le Pointe; Stefano Fumagalli; Blandine Beaupain; Patrick Nitschké; Christine Bôle-Feysot; Jean-Pierre de Villartay; Christine Bellanné-Chantelot; Jean Donadieu; Caroline Kannengiesser; Alan J Warren; Patrick Revy
Journal:  Blood       Date:  2019-05-31       Impact factor: 22.113

Review 8.  Molecular basis of the human ribosomopathy Shwachman-Diamond syndrome.

Authors:  Alan J Warren
Journal:  Adv Biol Regul       Date:  2017-09-06

9.  Osteoporosis and skeletal dysplasia caused by pathogenic variants in SGMS2.

Authors:  Minna Pekkinen; Paulien A Terhal; Lorenzo D Botto; Petra Henning; Riikka E Mäkitie; Paul Roschger; Amrita Jain; Matthijs Kol; Matti A Kjellberg; Eleftherios P Paschalis; Koen van Gassen; Mary Murray; Pinar Bayrak-Toydemir; Maria K Magnusson; Judith Jans; Mehran Kausar; John C Carey; Pentti Somerharju; Ulf H Lerner; Vesa M Olkkonen; Klaus Klaushofer; Joost Cm Holthuis; Outi Mäkitie
Journal:  JCI Insight       Date:  2019-04-04

10.  The mutational constraint spectrum quantified from variation in 141,456 humans.

Authors:  Konrad J Karczewski; Laurent C Francioli; Grace Tiao; Beryl B Cummings; Jessica Alföldi; Qingbo Wang; Ryan L Collins; Kristen M Laricchia; Andrea Ganna; Daniel P Birnbaum; Laura D Gauthier; Harrison Brand; Matthew Solomonson; Nicholas A Watts; Daniel Rhodes; Moriel Singer-Berk; Eleina M England; Eleanor G Seaby; Jack A Kosmicki; Raymond K Walters; Katherine Tashman; Yossi Farjoun; Eric Banks; Timothy Poterba; Arcturus Wang; Cotton Seed; Nicola Whiffin; Jessica X Chong; Kaitlin E Samocha; Emma Pierce-Hoffman; Zachary Zappala; Anne H O'Donnell-Luria; Eric Vallabh Minikel; Ben Weisburd; Monkol Lek; James S Ware; Christopher Vittal; Irina M Armean; Louis Bergelson; Kristian Cibulskis; Kristen M Connolly; Miguel Covarrubias; Stacey Donnelly; Steven Ferriera; Stacey Gabriel; Jeff Gentry; Namrata Gupta; Thibault Jeandet; Diane Kaplan; Christopher Llanwarne; Ruchi Munshi; Sam Novod; Nikelle Petrillo; David Roazen; Valentin Ruano-Rubio; Andrea Saltzman; Molly Schleicher; Jose Soto; Kathleen Tibbetts; Charlotte Tolonen; Gordon Wade; Michael E Talkowski; Benjamin M Neale; Mark J Daly; Daniel G MacArthur
Journal:  Nature       Date:  2020-05-27       Impact factor: 69.504

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  4 in total

Review 1.  Plastin 3 in health and disease: a matter of balance.

Authors:  Lisa Wolff; Eike A Strathmann; Ilka Müller; Daniela Mählich; Charlotte Veltman; Anja Niehoff; Brunhilde Wirth
Journal:  Cell Mol Life Sci       Date:  2021-05-23       Impact factor: 9.261

2.  Effects of Psychotropic Drugs on Ribosomal Genes and Protein Synthesis.

Authors:  Zoe S J Liu; Trang T T Truong; Chiara C Bortolasci; Briana Spolding; Bruna Panizzutti; Courtney Swinton; Jee Hyun Kim; Srisaiyini Kidnapillai; Mark F Richardson; Laura Gray; Olivia M Dean; Sean L McGee; Michael Berk; Ken Walder
Journal:  Int J Mol Sci       Date:  2022-06-28       Impact factor: 6.208

3.  Mosaic Deletions of Known Genes Explain Skeletal Dysplasias With High and Low Bone Mass.

Authors:  Mari Muurinen; Fulya Taylan; Symeon Tournis; Jesper Eisfeldt; Alexia Balanika; Heleni Vastardis; Sirpa Ala-Mello; Outi Mäkitie; Alice Costantini
Journal:  JBMR Plus       Date:  2022-07-05

4.  Oligogenic Inheritance of Monoallelic TRIP11, FKBP10, NEK1, TBX5, and NBAS Variants Leading to a Phenotype Similar to Odontochondrodysplasia.

Authors:  Alice Costantini; Helena Valta; Anne-Maarit Suomi; Outi Mäkitie; Fulya Taylan
Journal:  Front Genet       Date:  2021-06-02       Impact factor: 4.599

  4 in total

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