Literature DB >> 32910511

Expression profile and bioinformatics analysis of circular RNA in intestinal mucosal injury and repair after severe burns.

Wenwen Zhang1,2, Hao Yan1,2, Yuequ Deng1,2, Jiaqi Lou1,2, Pan Zhang1,2, Qingwei Cui1,2, Han Sun1,2, Hao Tang1,2, Yuan Sun1,2, Juan Yang1,2, Dan Li1,2, Yong Sun1,2.   

Abstract

Circular RNA (circRNA) is a novel noncoding RNA that is mostly found in humans and animals. Although the flux of circRNA research has increased in recent years, its precise function is still unclear. Some studies demonstrate that circRNAs can function as microRNA (miRNA) sponges involved in the regulation of competitive endogenous RNAs networks and play a crucial role in many biological processes. Other studies show that circRNAs play multiple biological roles in gastrointestinal diseases. However, the expression characteristics and function of circRNA in intestinal mucosal injury and repair after severe burn have not been reported. This study aims to screen differentially expressed circRNAs in intestinal mucosal injury and repair after severe burns and understand their underlying mechanisms. To test our hypothesis that circRNA may play a role in promoting repair in intestinal mucosa injury after severe burns, we collected the intestinal tissues of three severely burned mice and three pseudo-scalded mice and evaluated the expression of circRNAs via microarray analysis. Quantitative real-time polymerase chain reaction was also used to validate the circRNA microarray data by selecting six based on different multiples, original values, and p values. The host genes of all differentially expressed circRNAs and the downstream target genes of six selected DEcircRNAs were identified by Gene Ontology and the Kyoto Encyclopedia of Genes and Genomes pathway analysis. Meanwhile, we also created a circRNA-miRNA-mRNA network to predict the role and function of circRNAs in intestinal mucosal injury and repair after severe burns.
© 2020 International Federation of Cell Biology.

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Keywords:  circRNA-miRNA-mRNA network; circular RNA; microarray analysis; severe burn

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Year:  2020        PMID: 32910511     DOI: 10.1002/cbin.11464

Source DB:  PubMed          Journal:  Cell Biol Int        ISSN: 1065-6995            Impact factor:   3.612


  1 in total

1.  CircRNA_Maml2 promotes the proliferation and migration of intestinal epithelial cells after severe burns by regulating the miR-93-3p/FZD7/Wnt/β-catenin pathway.

Authors:  Wenwen Zhang; Yu Liao; Jiaqi Lou; Mengmeng Zhuang; Hao Yan; Qi Li; Yuequ Deng; Xiaohu Xu; Dandan Wen; Yong Sun
Journal:  Burns Trauma       Date:  2022-03-07
  1 in total

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