Literature DB >> 32893643

Current Methods for the Characterization of O-Glycans.

Hayden Wilkinson1,2,3, Radka Saldova1,2,3.   

Abstract

Glycosylation is crucial in cellular metabolism and survival. Of interest is the role of N-linked and O-linked glycans in disease states. Robust analytical methods must be defined to identify suitable glycan biomarkers and glyco-therapeutics. Fortunately, in N-glycan analysis, a universal enzyme exists to deglycosylate a variety of common-core structures from proteins for analysis using mass spectrometric and fluorescence techniques. Unfortunately, for their O-linked counterparts, no such enzyme exists. Furthermore, O-glycan heterogeneity is vast due to the lack of a common glycan core, making analysis challenging. As such, chemical methods are used to liberate O-glycans, however, often to the detriment of the glycan's structure due to "peeling" reactions. This review outlines approaches for O-glycan release and downstream glycomic and glycoproteomic analysis.

Entities:  

Keywords:  LC; MS; O-GlcNAc; O-glycans; exoglycosidases; glycoproteomics; glycosyltransferases; methods; quantitation; β-elimination

Mesh:

Substances:

Year:  2020        PMID: 32893643     DOI: 10.1021/acs.jproteome.0c00435

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  9 in total

Review 1.  Applications and continued evolution of glycan imaging mass spectrometry.

Authors:  Colin T McDowell; Xiaowei Lu; Anand S Mehta; Peggi M Angel; Richard R Drake
Journal:  Mass Spectrom Rev       Date:  2021-08-15       Impact factor: 10.946

Review 2.  Mass Spectrometry-Based Techniques to Elucidate the Sugar Code.

Authors:  Márkó Grabarics; Maike Lettow; Carla Kirschbaum; Kim Greis; Christian Manz; Kevin Pagel
Journal:  Chem Rev       Date:  2021-09-07       Impact factor: 72.087

3.  An Integrative Glycomic Approach for Quantitative Meat Species Profiling.

Authors:  Sean Chia; Gavin Teo; Shi Jie Tay; Larry Sai Weng Loo; Corrine Wan; Lyn Chiin Sim; Hanry Yu; Ian Walsh; Kuin Tian Pang
Journal:  Foods       Date:  2022-06-30

4.  Reversed Immunoglycomics Identifies α-Galactosyl-Bearing Glycotopes Specific for Leishmania major Infection.

Authors:  Alba L Montoya; Victoria M Austin; Susana Portillo; Irodiel Vinales; Roger A Ashmus; Igor Estevao; Sohan R Jankuru; Yasser Alraey; Waleed S Al-Salem; Álvaro Acosta-Serrano; Igor C Almeida; Katja Michael
Journal:  JACS Au       Date:  2021-07-12

5.  Glycoprotein molecular dynamics analysis: SARS-CoV-2 spike glycoprotein case study.

Authors:  João Victor Paccini Coutinho; Janaina Macedo-da-Silva; Simon Ngao Mule; Thales Kronenberger; Livia Rosa-Fernandes; Carsten Wrenger; Giuseppe Palmisano
Journal:  Adv Protein Chem Struct Biol       Date:  2022-06-09       Impact factor: 5.447

6.  An optimized protocol for PD-L1 pathological assessment with patient sample deglycosylation to improve correlation with therapeutic response.

Authors:  Ying-Nai Wang; Heng-Huan Lee; Yongkun Wei; Yu-Yi Chu; Weiya Xia; Michael Wang; Dihua Yu; Mien-Chie Hung
Journal:  STAR Protoc       Date:  2022-02-25

7.  Identification and characterization of O-linked glycans in cervical mucus as biomarkers of sperm transport: A novel sheep model.

Authors:  Laura Abril-Parreño; Hayden Wilkinson; Anette Krogenæs; Jack Morgan; Mary E Gallagher; Colm Reid; Xavier Druart; Sean Fair; Radka Saldova
Journal:  Glycobiology       Date:  2022-02-26       Impact factor: 4.313

Review 8.  Post-Translational Modifications of G Protein-Coupled Receptors Revealed by Proteomics and Structural Biology.

Authors:  Bingjie Zhang; Shanshan Li; Wenqing Shui
Journal:  Front Chem       Date:  2022-03-10       Impact factor: 5.221

9.  In-Depth Profiling of O-Glycan Isomers in Human Cells Using C18 Nanoliquid Chromatography-Mass Spectrometry and Glycogenomics.

Authors:  Noortje de Haan; Yoshiki Narimatsu; Mikkel Koed Møller Aasted; Ida S B Larsen; Irina N Marinova; Sally Dabelsteen; Sergey Y Vakhrushev; Hans H Wandall
Journal:  Anal Chem       Date:  2022-03-04       Impact factor: 6.986

  9 in total

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