Literature DB >> 32890746

FastField: An open-source toolbox for efficient approximation of deep brain stimulation electric fields.

Mehri Baniasadi1, Daniele Proverbio2, Jorge Gonçalves2, Frank Hertel3, Andreas Husch2.   

Abstract

Deep brain stimulation (DBS) is a surgical therapy to alleviate symptoms of certain brain disorders by electrically modulating neural tissues. Computational models predicting electric fields and volumes of tissue activated are key for efficient parameter tuning and network analysis. Currently, we lack efficient and flexible software implementations supporting complex electrode geometries and stimulation settings. Available tools are either too slow (e.g. finite element method-FEM), or too simple, with limited applicability to basic use-cases. This paper introduces FastField, an efficient open-source toolbox for DBS electric field and VTA approximations. It computes scalable electric field approximations based on the principle of superposition, and VTA activation models from pulse width and axon diameter. In benchmarks and case studies, FastField is solved in about 0.2 s,  ~ 1000 times faster than using FEM. Moreover, it is almost as accurate as using FEM: average Dice overlap of 92%, which is around typical noise levels found in clinical data. Hence, FastField has the potential to foster efficient optimization studies and to support clinical applications.
Copyright © 2020. Published by Elsevier Inc.

Entities:  

Keywords:  Deep brain stimulation; Electric field; Neuromodulation; Simulation; Toolbox; volume of tissue activated

Mesh:

Year:  2020        PMID: 32890746     DOI: 10.1016/j.neuroimage.2020.117330

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  5 in total

1.  Boundary element fast multipole method for modeling electrical brain stimulation with voltage and current electrodes.

Authors:  Sergey N Makarov; Laleh Golestanirad; William A Wartman; Bach Thanh Nguyen; Gregory M Noetscher; Jyrki P Ahveninen; Kyoko Fujimoto; Konstantin Weise; Aapo R Nummenmaa
Journal:  J Neural Eng       Date:  2021-08-19       Impact factor: 5.043

2.  Neurocapillary-Modulation.

Authors:  Niranjan Khadka; Marom Bikson
Journal:  Neuromodulation       Date:  2020-12-19

3.  Selecting the Most Effective DBS Contact in Essential Tremor Patients Based on Individual Tractography.

Authors:  Jan Niklas Petry-Schmelzer; Till A Dembek; Julia K Steffen; Hannah Jergas; Haidar S Dafsari; Gereon R Fink; Veerle Visser-Vandewalle; Michael T Barbe
Journal:  Brain Sci       Date:  2020-12-20

4.  Deep Brain Stimulation of the Ventral Intermediate Nucleus of the Thalamus in Writer's Cramp: A Case Report.

Authors:  Lisa Hirt; Fabio Grassia; Jeanne Feuerstein; John A Thompson; Steven Ojemann; Drew S Kern
Journal:  Tremor Other Hyperkinet Mov (N Y)       Date:  2021-11-08

5.  Dataset of concurrent EEG, ECG, and behavior with multiple doses of transcranial electrical stimulation.

Authors:  Nigel Gebodh; Zeinab Esmaeilpour; Abhishek Datta; Marom Bikson
Journal:  Sci Data       Date:  2021-10-27       Impact factor: 6.444

  5 in total

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