Literature DB >> 32883883

CHD7 and Runx1 interaction provides a braking mechanism for hematopoietic differentiation.

Jingmei Hsu1,2,3, Hsuan-Ting Huang4, Chung-Tsai Lee2,3, Avik Choudhuri5, Nicola K Wilson6, Brian J Abraham7, Victoria Moignard6, Iwo Kucinski6, Shuqian Yu2, R Katherine Hyde8, Joanna Tober2,3, Xiongwei Cai2,3, Yan Li2,3, Yalin Guo9, Song Yang4, Michael Superdock4, Eirini Trompouki4, Fernando J Calero-Nieto6, Alireza Ghamari10, Jing Jiang11, Peng Gao12, Long Gao12, Vy Nguyen4, Anne L Robertson4, Ellen M Durand4, Katie L Kathrein4, Iannis Aifantis13, Scott A Gerber14, Wei Tong11, Kai Tan12,15, Alan B Cantor10, Yi Zhou4, P Paul Liu8, Richard A Young7, Berthold Göttgens6, Nancy A Speck16,3, Leonard I Zon17,5.   

Abstract

Hematopoietic stem and progenitor cell (HSPC) formation and lineage differentiation involve gene expression programs orchestrated by transcription factors and epigenetic regulators. Genetic disruption of the chromatin remodeler chromodomain-helicase-DNA-binding protein 7 (CHD7) expanded phenotypic HSPCs, erythroid, and myeloid lineages in zebrafish and mouse embryos. CHD7 acts to suppress hematopoietic differentiation. Binding motifs for RUNX and other hematopoietic transcription factors are enriched at sites occupied by CHD7, and decreased RUNX1 occupancy correlated with loss of CHD7 localization. CHD7 physically interacts with RUNX1 and suppresses RUNX1-induced expansion of HSPCs during development through modulation of RUNX1 activity. Consequently, the RUNX1:CHD7 axis provides proper timing and function of HSPCs as they emerge during hematopoietic development or mature in adults, representing a distinct and evolutionarily conserved control mechanism to ensure accurate hematopoietic lineage differentiation.

Entities:  

Keywords:  CHD7; RUNX1; hematopoiesis

Mesh:

Substances:

Year:  2020        PMID: 32883883      PMCID: PMC7519295          DOI: 10.1073/pnas.2003228117

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   12.779


  60 in total

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Authors:  Brendan K Faherty; Scott A Gerber
Journal:  Anal Chem       Date:  2010-08-15       Impact factor: 6.986

2.  Runx1 is sufficient for blood cell formation from non-hemogenic endothelial cells in vivo only during early embryogenesis.

Authors:  Amanda D Yzaguirre; Elizabeth D Howell; Yan Li; Zijing Liu; Nancy A Speck
Journal:  Development       Date:  2018-01-29       Impact factor: 6.868

3.  Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities.

Authors:  Sven Heinz; Christopher Benner; Nathanael Spann; Eric Bertolino; Yin C Lin; Peter Laslo; Jason X Cheng; Cornelis Murre; Harinder Singh; Christopher K Glass
Journal:  Mol Cell       Date:  2010-05-28       Impact factor: 17.970

4.  Cbfb/Runx1 repression-independent blockage of differentiation and accumulation of Csf2rb-expressing cells by Cbfb-MYH11.

Authors:  R Katherine Hyde; Yasuhiko Kamikubo; Stacie Anderson; Martha Kirby; Lemlem Alemu; Ling Zhao; P Paul Liu
Journal:  Blood       Date:  2009-12-09       Impact factor: 22.113

5.  CHD7 targets active gene enhancer elements to modulate ES cell-specific gene expression.

Authors:  Michael P Schnetz; Lusy Handoko; Batool Akhtar-Zaidi; Cynthia F Bartels; C Filipe Pereira; Amanda G Fisher; David J Adams; Paul Flicek; Gregory E Crawford; Thomas Laframboise; Paul Tesar; Chia-Lin Wei; Peter C Scacheri
Journal:  PLoS Genet       Date:  2010-07-15       Impact factor: 5.917

Review 6.  Core binding factor at the crossroads: determining the fate of the HSC.

Authors:  Kevin A Link; Fu-Sheng Chou; James C Mulloy
Journal:  J Cell Physiol       Date:  2010-01       Impact factor: 6.384

7.  Runx1 loss minimally impacts long-term hematopoietic stem cells.

Authors:  Xiongwei Cai; Justin J Gaudet; James K Mangan; Michael J Chen; Maria Elena De Obaldia; Zaw Oo; Patricia Ernst; Nancy A Speck
Journal:  PLoS One       Date:  2011-12-01       Impact factor: 3.240

8.  Adenosine signaling promotes hematopoietic stem and progenitor cell emergence.

Authors:  Lili Jing; Owen J Tamplin; Michael J Chen; Qing Deng; Shenia Patterson; Peter G Kim; Ellen M Durand; Ashley McNeil; Julie M Green; Shinobu Matsuura; Julien Ablain; Margot K Brandt; Thorsten M Schlaeger; Anna Huttenlocher; George Q Daley; Katya Ravid; Leonard I Zon
Journal:  J Exp Med       Date:  2015-04-13       Impact factor: 14.307

9.  Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.

Authors:  Michael I Love; Wolfgang Huber; Simon Anders
Journal:  Genome Biol       Date:  2014       Impact factor: 13.583

10.  Runx1 is required for the endothelial to haematopoietic cell transition but not thereafter.

Authors:  Michael J Chen; Tomomasa Yokomizo; Brandon M Zeigler; Elaine Dzierzak; Nancy A Speck
Journal:  Nature       Date:  2009-01-07       Impact factor: 49.962

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  6 in total

Review 1.  Role of ATP-dependent chromatin remodelers in hematopoietic stem and progenitor cell maintenance.

Authors:  Zhaowei Tu; Yi Zheng
Journal:  Curr Opin Hematol       Date:  2022-02-18       Impact factor: 3.218

2.  Histone acetylation dynamics modulates chromatin conformation and allele-specific interactions at oncogenic loci.

Authors:  Stephanie Sungalee; Yuanlong Liu; Ruxandra A Lambuta; Natalya Katanayeva; Maria Donaldson Collier; Daniele Tavernari; Sandrine Roulland; Giovanni Ciriello; Elisa Oricchio
Journal:  Nat Genet       Date:  2021-05-10       Impact factor: 38.330

Review 3.  Chromatin Imbalance as the Vertex Between Fetal Valproate Syndrome and Chromatinopathies.

Authors:  Chiara Parodi; Elisabetta Di Fede; Angela Peron; Ilaria Viganò; Paolo Grazioli; Silvia Castiglioni; Richard H Finnell; Cristina Gervasini; Aglaia Vignoli; Valentina Massa
Journal:  Front Cell Dev Biol       Date:  2021-04-20

4.  Improving the differentiation potential of pluripotent stem cells by optimizing culture conditions.

Authors:  Takako Yamamoto; Mao Arita; Hirotaka Kuroda; Takashi Suzuki; Shin Kawamata
Journal:  Sci Rep       Date:  2022-08-19       Impact factor: 4.996

5.  The chromatin remodeler CHD8 governs hematopoietic stem/progenitor survival by regulating ATM-mediated P53 protein stability.

Authors:  Zhaowei Tu; Chen Wang; Ashley K Davis; Mengwen Hu; Chuntao Zhao; Mei Xin; Q Richard Lu; Yi Zheng
Journal:  Blood       Date:  2021-07-22       Impact factor: 25.476

Review 6.  Sentinels of chromatin: chromodomain helicase DNA-binding proteins in development and disease.

Authors:  Andrej Alendar; Anton Berns
Journal:  Genes Dev       Date:  2021-11-01       Impact factor: 11.361

  6 in total

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