Literature DB >> 32868194

Rapid and semi-quantitative colorimetric loop-mediated isothermal amplification detection of ASFV via HSV color model transformation.

Ling-Shan Yu1, Sheng-Yeh Chou2, Hsing-Yu Wu3, Yu-Cheng Chen4, Yen-Hsu Chen5.   

Abstract

BACKGROUND: African Swine Fever (ASF) is a highly contagious and lethal viral disease of swine, the presence of which in groups of pigs leads to enormous economic losses in the farming industry. However, vaccines and drugs to treat ASF have yet to be developed. To control the spread of the African Swine Fever Virus (ASFV), a diagnostic method that can be applied rapidly and can detect the disease during the early stages of infection is urgently needed.
METHODS: In this study, we demonstrate a rapid and easy-to-use ASFV detection method that combines loop-mediated isothermal amplification (LAMP) and image processing with the hue-saturation-value (HSV) color model. This method was validated through use of synthetic ASFV DNA.
RESULTS: The method shows high sensitivity, as it detects as few as 10 copies per reaction within 20 min. The speed and sensitivity of this newly developed assay are superior to those reported in previous studies. In addition, through HSV color space transformation, the colorimetric result of this LAMP assay can be used for a semi-quantitative analysis for ASFV (ranging from 108 to 101 copies per reaction) and improve the discern to low concentration samples from a negative control.
CONCLUSION: These results show that the combination of ASFV-LAMP assay and HSV color space transformation may accelerate the screening process of pigs for ASFV infection. Overall, this study provides a rapid, sensitive, early-stage, on-site diagnosis of ASFV infection and has potential to be applied to other infectious diseases.
Copyright © 2021. Published by Elsevier B.V.

Entities:  

Keywords:  ASFV; Colorimetric assay; HSV model; LAMP

Mesh:

Substances:

Year:  2020        PMID: 32868194     DOI: 10.1016/j.jmii.2020.08.003

Source DB:  PubMed          Journal:  J Microbiol Immunol Infect        ISSN: 1684-1182            Impact factor:   4.399


  4 in total

1.  A visual and reversible nanoprobe for rapid and on-site determination of hexavalent chromium and lysine based on dual-emission carbon quantum dots coupled with smartphone.

Authors:  Chi-Xuan Yao; Lu Yang; Jin Wang; Huan Lv; Xue-Meng Ji; Shi-Jie Li; Jing-Min Liu; Shuo Wang
Journal:  Mikrochim Acta       Date:  2022-08-29       Impact factor: 6.408

2.  Development of an indirect ELISA to specifically detect antibodies against African swine fever virus: bioinformatics approaches.

Authors:  Zhan Gao; Jun-Jun Shao; Guang-Lei Zhang; Su-Dan Ge; Yan-Yan Chang; Lei Xiao; Hui-Yun Chang
Journal:  Virol J       Date:  2021-05-05       Impact factor: 4.099

3.  Development of a ladder-shape melting temperature isothermal amplification (LMTIA) assay for detection of African swine fever virus (ASFV).

Authors:  Yongzhen Wang; Borui Wang; Dandan Xu; Meng Zhang; Xiaohua Zhang; Deguo Wang
Journal:  J Vet Sci       Date:  2022-05-02       Impact factor: 1.603

4.  Development of a Cleaved Probe-Based Loop-Mediated Isothermal Amplification Assay for Rapid Detection of African Swine Fever Virus.

Authors:  Songqi Wang; Haiyan Shen; Qijie Lin; Jun Huang; Chunhong Zhang; Zhicheng Liu; Minhua Sun; Jianfeng Zhang; Ming Liao; Yugu Li; Jianmin Zhang
Journal:  Front Cell Infect Microbiol       Date:  2022-05-26       Impact factor: 6.073

  4 in total

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