Literature DB >> 32862656

Skipped Over: Tuning Natural Killer Cells Toward HIV Through Alternative Splicing.

Daniel R Ram1, Kyle Kroll1, R Keith Reeves1,2.   

Abstract

Natural killer (NK) cells provide some of the earliest immune responses to infection, but when viruses manipulate or perturb the immune environment to alter NK cell function, this places the host at a disadvantage. Indeed, others and we observe that in the context of HIV/simian immunodeficiency virus (SIV) infection, although NK cells are not infected, they can become dysfunctional over time. Several studies have characterized protein and transcriptional profiles of NK cells during HIV/SIV infection, but none have examined whether the production of alternative transcripts and corresponding isoforms is modulated. This phenomenon occurs broadly in normal biology and in other disease states, and could provide a novel avenue of investigation that may yield better targets to restore or augment NK cell responses to HIV/SIV. Herein, we briefly summarize published and new data that may provide a perspective on how to target NK cell splice variants.

Entities:  

Keywords:  HIV/SIV; alternative splicing; natural killer cell

Mesh:

Year:  2020        PMID: 32862656      PMCID: PMC7703092          DOI: 10.1089/AID.2020.0116

Source DB:  PubMed          Journal:  AIDS Res Hum Retroviruses        ISSN: 0889-2229            Impact factor:   2.205


  31 in total

1.  IsoformSwitchAnalyzeR: analysis of changes in genome-wide patterns of alternative splicing and its functional consequences.

Authors:  Kristoffer Vitting-Seerup; Albin Sandelin
Journal:  Bioinformatics       Date:  2019-11-01       Impact factor: 6.937

2.  Entering the Modern Era of Gene Therapy.

Authors:  Xavier M Anguela; Katherine A High
Journal:  Annu Rev Med       Date:  2018-11-26       Impact factor: 13.739

3.  Tat protein of HIV-1 stimulates growth of cells derived from Kaposi's sarcoma lesions of AIDS patients.

Authors:  B Ensoli; G Barillari; S Z Salahuddin; R C Gallo; F Wong-Staal
Journal:  Nature       Date:  1990-05-03       Impact factor: 49.962

Review 4.  NK cells in HIV-1 infection: evidence for their role in the control of HIV-1 infection.

Authors:  G Alter; M Altfeld
Journal:  J Intern Med       Date:  2009-01       Impact factor: 8.989

5.  NK cell exhaustion: bad news for chronic disease?

Authors:  Jamie L Schafer; Michaela C Müller-Trutwin; R Keith Reeves
Journal:  Oncotarget       Date:  2015-09-08

6.  Gene Therapy via Trans-Splicing for LMNA-Related Congenital Muscular Dystrophy.

Authors:  Feriel Azibani; Astrid Brull; Ludovic Arandel; Maud Beuvin; Isabelle Nelson; Arnaud Jollet; Esma Ziat; Bernard Prudhon; Sofia Benkhelifa-Ziyyat; Marc Bitoun; Stéphanie Lorain; Gisèle Bonne; Anne T Bertrand
Journal:  Mol Ther Nucleic Acids       Date:  2017-12-30       Impact factor: 8.886

7.  Salmon provides fast and bias-aware quantification of transcript expression.

Authors:  Rob Patro; Geet Duggal; Michael I Love; Rafael A Irizarry; Carl Kingsford
Journal:  Nat Methods       Date:  2017-03-06       Impact factor: 28.547

8.  Tuning of NK-Specific HLA-C Expression by Alternative mRNA Splicing.

Authors:  Frederick J Goodson-Gregg; Brian Rothbard; Amy Zhang; Paul W Wright; Hongchuan Li; Victoria E Walker-Sperling; Mary Carrington; Stephen K Anderson
Journal:  Front Immunol       Date:  2020-01-10       Impact factor: 7.561

9.  Poliovirus 2A protease triggers a selective nucleo-cytoplasmic redistribution of splicing factors to regulate alternative pre-mRNA splicing.

Authors:  Enrique Álvarez; Alfredo Castelló; Luis Carrasco; José M Izquierdo
Journal:  PLoS One       Date:  2013-09-16       Impact factor: 3.240

10.  ZIKV infection effects changes in gene splicing, isoform composition and lncRNA expression in human neural progenitor cells.

Authors:  Benxia Hu; Yongxia Huo; Liping Yang; Guijun Chen; Minhua Luo; Jinlong Yang; Jumin Zhou
Journal:  Virol J       Date:  2017-11-07       Impact factor: 4.099

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