Literature DB >> 3285324

A yeast tRNA(Arg) gene can act as promoter for a 5' flank deficient, non-transcribable tRNA(SUP)6 gene to produce biologically active suppressor tRNA.

K B Stråby1.   

Abstract

In S. cerevisiae most tRNA genes are located and expressed as single entities. The tDNA(Arg)-tDNA(Asp) pair, however, is transcribed into a dimeric precursor before being processed into two mature tRNA species. The second gene of this pair, tDNA(Asp), is totally dependent on the first gene, tDNA(Arg), and its promoter components, for homologous in vitro transcription. The second gene in the pair is now replaced by the ochre suppressor tDNA(SUP)6-o, which, by itself, cannot be transcribed because of a nonfunctional 5' flanking region. The tDNA(Arg)-tDNA(SUP)6-o was transcribed into a dimeric precursor which was processed to mature tRNA molecules as judged in vitro by electrophoretic separation, and in vivo by their ability to suppress ochre but not amber yeast mutations. Mutations in the internal promoter of the first gene decreased transcription, both in vitro and in vivo, of the second-tRNA(SUP)6-o-gene. Thus tDNA(Arg) with its 5' flanking region can act as an external promoter for other RNA polymerase III-read genes that are by themselves inactive due to impaired promoter/modulator regions.

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Year:  1988        PMID: 3285324      PMCID: PMC336436          DOI: 10.1093/nar/16.7.2841

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  31 in total

1.  Studies on microbial RNA, 3. Formation of submethylated sRNA in Saccharomyces cerevisiae.

Authors:  K Kjellin-Straby; H G Boman
Journal:  Proc Natl Acad Sci U S A       Date:  1965-06       Impact factor: 11.205

2.  Mutational analysis of the coordinate expression of the yeast tRNAArg-tRNAAsp gene tandem.

Authors:  V M Reyes; A Newman; J Abelson
Journal:  Mol Cell Biol       Date:  1986-07       Impact factor: 4.272

3.  tRNA gene transcription in yeast: effects of specified base substitutions in the intragenic promoter.

Authors:  A J Newman; R C Ogden; J Abelson
Journal:  Cell       Date:  1983-11       Impact factor: 41.582

4.  A short 5' flanking region containing conserved sequences is required for silkworm alanine tRNA gene activity.

Authors:  D Larson; J Bradford-Wilcox; L S Young; K U Sprague
Journal:  Proc Natl Acad Sci U S A       Date:  1983-06       Impact factor: 11.205

5.  Intron mutations affect splicing of Saccharomyces cerevisiae SUP53 precursor tRNA.

Authors:  M C Strobel; J Abelson
Journal:  Mol Cell Biol       Date:  1986-07       Impact factor: 4.272

6.  The yeast cloning vector YEp13 contains a tRNALeu3 gene that can mutate to an amber suppressor.

Authors:  D A Fischhoff; R H Waterston; M V Olson
Journal:  Gene       Date:  1984-03       Impact factor: 3.688

7.  Dimeric tRNA precursors in yeast.

Authors:  O Schmidt; J Mao; R Ogden; J Beckmann; H Sakano; J Abelson; D Söll
Journal:  Nature       Date:  1980-10-23       Impact factor: 49.962

8.  5'-flanking sequences that inhibit in vitro transcription of a xenopus laevis tRNA gene.

Authors:  R A Hipskind; S G Clarkson
Journal:  Cell       Date:  1983-10       Impact factor: 41.582

9.  High-frequency transformation of yeast by plasmids containing the cloned yeast ARG4 gene.

Authors:  C L Hsiao; J Carbon
Journal:  Proc Natl Acad Sci U S A       Date:  1979-08       Impact factor: 11.205

10.  Effects of alterations in the 3' flanking sequence on in vivo and in vitro expression of the yeast SUP4-o tRNATyr gene.

Authors:  D S Allison; B D Hall
Journal:  EMBO J       Date:  1985-10       Impact factor: 11.598

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  6 in total

1.  Identification of new eukaryotic tRNA genes in genomic DNA databases by a multistep weight matrix analysis of transcriptional control regions.

Authors:  A Pavesi; F Conterio; A Bolchi; G Dieci; S Ottonello
Journal:  Nucleic Acids Res       Date:  1994-04-11       Impact factor: 16.971

2.  Transfer RNA-mediated suppression of stop codons in protoplasts and transgenic plants.

Authors:  V T Carneiro; G Pelletier; I Small
Journal:  Plant Mol Biol       Date:  1993-07       Impact factor: 4.076

3.  Expression and function of a human initiator tRNA gene in the yeast Saccharomyces cerevisiae.

Authors:  M A Francis; U L Rajbhandary
Journal:  Mol Cell Biol       Date:  1990-09       Impact factor: 4.272

4.  A selection for mutants of the RNA polymerase III transcription apparatus: PCF1 stimulates transcription of tRNA and 5S RNA genes.

Authors:  I Willis; P Schmidt; D Söll
Journal:  EMBO J       Date:  1989-12-20       Impact factor: 11.598

5.  The RNA polymerase III-dependent family of genes in hemiascomycetes: comparative RNomics, decoding strategies, transcription and evolutionary implications.

Authors:  Christian Marck; Rym Kachouri-Lafond; Ingrid Lafontaine; Eric Westhof; Bernard Dujon; Henri Grosjean
Journal:  Nucleic Acids Res       Date:  2006-04-05       Impact factor: 16.971

6.  Expanding the genetic code of yeast for incorporation of diverse unnatural amino acids via a pyrrolysyl-tRNA synthetase/tRNA pair.

Authors:  Susan M Hancock; Rajendra Uprety; Alexander Deiters; Jason W Chin
Journal:  J Am Chem Soc       Date:  2010-10-27       Impact factor: 15.419

  6 in total

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