| Literature DB >> 32848724 |
Ting Zou1,2,3, Jun-Yan Liu4, Li She5,6, Ji-Ye Yin2, Xi Li2, Xiang-Ping Li7, Hong-Hao Zhou2, Juan Chen7, Zhao-Qian Liu2,3.
Abstract
OBJECTIVE: Lung cancer is one of the most prevalent cancers and the leading cause of cancer-related death in the world. Platinum-based chemotherapy plays an important role in lung cancer treatment, but the therapeutic effect varies from person to person. Heat shock proteins (HSPs) have been reported to be associated with the survival time of lung cancer patients, which may be a potential biomarker in lung cancer treatment. The aim of this study was to investigate the association between genetic polymorphisms and the prognosis in lung cancer patients treated with platinum-based chemotherapy.Entities:
Keywords: genetic polymorphism; heat shock proteins; lung cancer; platinum-based chemotherapy; prognosis
Year: 2020 PMID: 32848724 PMCID: PMC7396685 DOI: 10.3389/fphar.2020.01029
Source DB: PubMed Journal: Front Pharmacol ISSN: 1663-9812 Impact factor: 5.810
Clinical characteristic of lung cancer patients.
| Patient characteristics | N (%) |
|---|---|
| Total no. of patients | 346 |
| Gender | |
| Male | 286(82.7) |
| Female | 60(17.3) |
| Age | |
| ≤55 | 154(44.5) |
| >55 | 192(55.5) |
| Clinical stage | |
| I–II | 8(2.3) |
| III–IV | 251(72.5) |
| LD | 39(11.3) |
| ED | 43(12.4) |
| Smoking status | |
| Non-smoker | 122(35.3) |
| Smoker | 224(64.7) |
| Histology | |
| Adenocarcinoma | 112(32.4) |
| Squamous cell | 122(35.3) |
| Small cell | 100(28.9) |
| Chemotherapy regimens | |
| Platinum/gemcitabine | 103(29.8) |
| Platinum/paclitaxel | 60(17.3) |
| Platinum/navelbine | 7(2.0) |
| Platinum/etoposide | 71(20.5) |
| Platinum/irinotecan | 6(1.7) |
The 19 gene polymorphisms examined in this study.
| Gene | Locus | dbSNP | Call Rate(%) | Polymorphism | MAF |
|---|---|---|---|---|---|
| 5q31.1 | rs3088225 | 97.69 | A/G | 0.34 | |
| rs4616886 | 99.13 | C/T | 0.21 | ||
| 7q11.23 | rs2009836 | 97.40 | A/G | 0.22 | |
| rs2070804 | 97.98 | G/T | 0.29 | ||
| rs2868370 | 97.69 | C/T | 0.15 | ||
| rs2868371 | 98.84 | C/G | 0.29 | ||
| rs7459185 | 98.84 | C/G | 0.43 | ||
| 2q33.1 | rs13386066 | 98.55 | A/G | 0.21 | |
| rs17730989 | 98.27 | C/T | 0.27 | ||
| rs2605039 | 98.84 | G/T | 0.48 | ||
| 7p22 | rs10951983 | 99.41 | A/G | 0.07 | |
| rs12536544 | 97.69 | A/G | 0.26 | ||
| rs3813517 | 98.84 | A/G | 0.12 | ||
| rs4720672 | 99.13 | C/T | 0.17 | ||
| rs836548 | 98.55 | A/T | 0.23 | ||
| rs836554 | 96.24 | C/T | 0.28 | ||
| rs836556 | 99.42 | C/T | 0.09 | ||
| 3p21.3 | rs3811699 | 100.00 | A/G | 0.07 | |
| rs9878943 | 96.53 | A/G | 0.06 |
Distribution of characteristics in lung cancer patients and prognosis analysis.
| Variables | Patients N (%) | Death N (%) | MST-OS (year) | MST-PFS (year) |
|---|---|---|---|---|
| 346 | 279 | 4.42 | 3.16 | |
| NSCLC | 234(67.6) | 189(67.7) | 4.58 | 3.25 |
| SCLC | 100 (28.9) | 80(28.7) | 4.35 | 3.10 |
| Male | 286(82.7) | 229(82.1) | 4.42 | 2.93 |
| Female | 60(17.3) | 50(17.9) | 4.77 | 4.47 |
| ≤55 | 154(44.5) | 127(45.5) | 4.52 | 3.09 |
| >55 | 192(55.5) | 152(54.5) | 4.35 | 3.21 |
| I/II/LD | 47(13.6) | 39(14.0) | 3.80 | 3.19 |
| III/IV/ED | 294(85.0) | 240(86.0) | 4.53 | 3.16 |
| Non-smoker | 122(35.3) | 97(34.8) | 4.83 | 4.60 |
| Smoker | 224(64.7) | 182(65.2) | 4.13 | 2.61 |
MST, median survival time; OS, overall survival; PFS, progression free survival; NSCLC, non-small lung cancer; SCLC, small cell lung cancer; LD, Limitation period; ED, Extensive period.
Association of the HSPB1 rs2070804 polymorphisms and OS, HSPA4 rs3088225 polymorphisms and PFS in lung cancer patients.
| Gene | Polymorphisms | Genotype | MST(year) | Additive | Dominant | Recessive | |||
|---|---|---|---|---|---|---|---|---|---|
| OR(95%CI) | OR(95%CI) | OR(95%CI) | |||||||
| HSPB1 | rs2070804 | GG | 3.047 | 0.66(0.45–0.98) | 0.041* | 0.55 (0.34–0.89) | 0.015* | 0.87(0.35–2.17) | 0.761 |
| GT | 3.942 | ||||||||
| HSPA4 | rs3088225 | AA | 4.219 | 0.77(0.55–1.09) | 0.140 | 0.85(0.55–1.33) | 0.477 | 0.44(0.19–1.00) | 0.049* |
| GA | 3.103 | ||||||||
| GG | 2.504 | ||||||||
*p < 0.05.
Figure 1The HSPB1 rs2070804 and HSPA4 rs3088225 polymorphisms are significantly associcated with the prognosis in lung cancer patients treated with platinum-based chemotherapy, and the T variant allele of HSPB1 rs2070804, the A allele of HSPA4 rs3088225 are protective alleles. (A) Lung cancer patients that carried the genotype of HSPB1 rs2070804 TT have a longer overall survival time than GT or GG carries in Additive model (p=0.041*), and in the dominant model (p=0.015*). (B) Patients that carry the genotype of HSPA4 rs3088225 AA and GA have a longer progression free survival time than GG in Recessive model (p=0.049*).
Figure 2The HSPB1 rs2070804 and HSPA4 rs3088225 polymorphisms are significantly associated with the survival time in the subgroups of lung cancer patients treated with platinum-based chemotherapy. (A) HSPB1 rs2070804 polymorphism is significantly associated with the overall survival time in age more than 55 years, male, NSCLC, and patients whose clinical stage are I/II/LD. (B) HSPA4 rs3088225 polymorphism is significantly correlated with the progression free survival time in male, NSCLC, and patients whose clinical stage are III/IV/ED.
Stratification analyses of Association between polymorphisms and OS or PFS in lung cancer patients.
| OS/PFS | Gene | Polymorphisms | Subgroup | Additive | Dominant | Recessive | |||
|---|---|---|---|---|---|---|---|---|---|
| OR(95%CI) | OR(95%CI) | OR(95%CI) | |||||||
| OS | HSPE1 | rs2605039 | SCLC | 0.69(0.36–1.32) | 0.259 | 0.39(0.15–0.99) | 0.047* | 1.28(0.40–4.14) | 0.679 |
| OS | RAC1 | rs836548 | age ≤ 55 | 2.01(1.09–3.70) | 0.026* | 2.46(1.17–5.14) | 0.017* | 1.92(0.41–8.96) | 0.408 |
| rs12536544 | age ≤ 55 | 1.70 (0.96–2.98) | 0.067 | 2.15(1.04–4.43) | 0.039* | 1.45(0.40–5.28) | 0.576 | ||
| rs3813517 | I/II/LD | 3.06(1.00–9.35) | 0.050 | 5.25(1.05–26.2) | 0.043* | 6.27(0.58–67.4) | 0.130 | ||
| PFS | HSPB1 | rs2868370 | NSCLC | 1.94(1.16–3.25) | 0.012* | 1.89(1.05–3.37) | 0.033* | 0.33(0.12–0.92) | 0.033 |
| SCLC | 0.30(0.10–0.89) | 0.030* | 0.28(0.09–0.92) | 0.037* | |||||
| Non-smoking | 2.36(1.14–4.89) | 0.021* | 2.65(1.16–6.06) | 0.021* | 3.62(0.37–35.85) | 0.271 | |||
| rs2009836 | NSCLC | 1.61(1.05–2.46) | 0.030* | 1.66(0.96–2.86) | 0.069 | 2.68(0.94–7.64) | 0.066 | ||
*p < 0.05.