| Literature DB >> 32845012 |
Pedro Ferreirinha1,2, Camila Ribeiro1,2, Junko Morimoto3, Jonathan J M Landry4, Minoru Matsumoto3, Catarina Meireles1, Andrea J White5, Izumi Ohigashi6, Leonor Araújo1,2, Vladimir Benes4, Yousuke Takahama7, Graham Anderson5, Mitsuru Matsumoto3, Nuno L Alves1,2.
Abstract
Autoimmune regulator+ (Aire) medullary thymic epithelial cells (mTECs) play a critical role in tolerance induction. Several studies demonstrated that Aire+ mTECs differentiate further into Post-Aire cells. Yet, the identification of terminal stages of mTEC maturation depends on unique fate-mapping mouse models. Herein, we resolve this limitation by segmenting the mTEChi (MHCIIhi CD80hi ) compartment into mTECA/hi (CD24- Sca1- ), mTECB/hi (CD24+ Sca1- ), and mTECC/hi (CD24+ Sca1+ ). While mTECA/hi included mostly Aire-expressing cells, mTECB/hi contained Aire+ and Aire- cells and mTECC/hi were mainly composed of cells lacking Aire. The differential expression pattern of Aire led us to investigate the precursor-product relationship between these subsets. Strikingly, transcriptomic analysis of mTECA/hi , mTECB/hi , and mTECC/hi sequentially mirrored the specific genetic program of Early-, Late- and Post-Aire mTECs. Corroborating their Post-Aire nature, mTECC/hi downregulated the expression of tissue-restricted antigens, acquired traits of differentiated keratinocytes, and were absent in Aire-deficient mice. Collectively, our findings reveal a new and simple blueprint to survey late stages of mTEC differentiation.Entities:
Keywords: autoimmune regulator; differentiation; medullary thymic epithelial cell; thymus; tolerance induction
Mesh:
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Year: 2020 PMID: 32845012 PMCID: PMC7891440 DOI: 10.1002/eji.202048764
Source DB: PubMed Journal: Eur J Immunol ISSN: 0014-2980 Impact factor: 5.532
Figure 1The combined analysis of CD24 and Sca1 defines new mature mTEC subsets with distinct patterns of Aire expression. (A) Thymi from C57BL/6 mice were isolated at the indicated time points and cells were stained with PerCP‐Cy5‐conjugated anti‐CD45.2, PE‐conjugated anti‐Ly51, APC‐eFlour 780‐conjugated anti‐MHCII (I‐A/I‐E), eFlour 660‐cojugated anti‐AIRE, BV421‐conjugated anti‐EpCAM, BV650‐conjugated anti‐CD80, BV510‐conjugated anti‐CD24, BV786‐conjugated anti‐Sca1; Biotinylated UEA: BV711‐conjugated streptavidin. Total mTECs (CD45−EpCAM+UEA+) were subdivided into three subpopulations based on the expression pattern of CD24 and Sca1: mTECA (CD24−Sca1−, blue), mTECB (CD24+Sca1−, red), and mTECC (CD24+Sca1+, green). Bar graph displays the number of mTEC subsets at different time points. Representation of mTECA, mTECB, and mTECC within mTEClo (B) and mTEChi (C) at different time points. (A–C) Data are representative of at least three experiments per time point with 2–4 mice per experiment. Numbers in plots indicate the frequency of cells found within each gate. Bar graph displays the frequency of mTECA, mTECB and mTECC within mTEClo and mTEChi, as mean plus SD. P – Postnatal day; WK – Postnatal weeks. Histograms in (C) show Aire expression within mTECA‐C/hi subsets. Numbers in plots indicate the frequency of cells found within each gate. Bar graph below displays the frequency of Aire+ cells within mTECA‐C/hi subsets across time. (D) Aire expression in mTEChi (top) and mTEClo (bottom). The expression of CD24 and Sca1 was analysed on Aire+mTEChi (pseudo‐coloured purple). Total mTECs were plotted in gray. Column chart illustrates the relative composition of mTECA/hi (blue), mTECB/hi (red) and mTECC/hi (green) subsets within the total Aire+mTEChi. Data are representative of at least three experiments per time point with 2–4 mice per experiment.
Figure 2Transcriptomic analysis of mTECA‐C with mTEClo and mTEChi, and their relationship to the genetic profile of distinct stages of the Aire+mTEC differentiation. RNA‐Seq analysis was performed on independently sorted biological replicates of mTECA/lo (n = 2), mTECB/lo (n = 3), mTECC/lo (n = 5), mTECA/hi (n = 6), mTECB/hi (n = 4), and mTECC/hi (n = 5). (A) Principal component analysis (PCA) and dendrogram shows the hierarchical clustering between the distinct biological samples; graph shows the total amount of genes detected in each subset. (B) Heat maps representing the deviation to the average expression of Aire‐dependent (left) and Aire‐independent (right) TRAs in mTECA‐C/lo‐hi. (C) Heat maps represent the deviation to the average expression of the top 200 specifically upregulated genes of the mTEC I‐IV subsets in mTECA‐C/lo‐hi. (D) Heat maps represent the deviation to the average expression of the top 500 specifically upregulated genes of Pre‐, Early‐, Late‐, and Post‐Aire subsets in mTECA‐C/lo‐hi.
Figure 3Altered mTECA‐C/hi composition in Aire‐deficient mice. (A) Thymic cells were stained with PerCP‐Cy5‐conjugated anti‐CD45.2, PE‐conjugated anti‐Ly51, APC‐eFlour 780‐conjugated anti‐MHCII (I‐A/I‐E), BV421‐conjugated anti‐EpCAM, BV650‐conjugated anti‐CD80, BV510‐conjugated anti‐CD24, BV786‐conjugated anti‐Sca1; Biotinylated UEA: BV711‐conjugated streptavidin. Total mTECs (CD45−EpCAM+UEA+) from 6‐week‐old Aire−/− and control (WT) C57BL/6 mouse thymi were analyzed for the expression of CD80, and mTECA‐C subsets were respectively identified with mTEClo and mTEChi. Plots shown are of a representative analysis out of three independent experiments with 1–2 mice of each genotype per experiment. Frequencies for mTECA‐C populations are shown as a mean plus SD. (B) Proposed model for the phenotypic discrimination of Early‐, Late, and Post‐Aire stages of mTEC differentiation.