Literature DB >> 32840476

3D structure of three jumbo phage heads.

Emmanuelle Neumann1, Takeru Kawasaki2, Grégory Effantin1, Leandro F Estrozi1, Orawan Chatchawankanphanich3, Takashi Yamada2,4, Guy Schoehn1.   

Abstract

Jumbo phages are bacteriophages that carry more than 200 kbp of DNA. In this study we characterized two jumbo phages (ΦRSL2 and ΦXacN1) and one semi-jumbo phage (ΦRP13) at the structural level by cryo-electron microscopy. Focusing on their capsids, three-dimensional structures of the heads at resolutions ranging from 16 to 9 Å were calculated. Based on these structures we determined the geometrical basis on which the icosahedral capsids of these phages are constructed, which includes the accessory and decorative proteins that complement them. A triangulation number novel to Myoviridae (ΦRP13; T=21) was discovered as well as two others, which are more common for jumbo phages (T=27 and T=28). Based on one of the structures we also provide evidence that accessory or decorative proteins are not a prerequisite for maintaining the structural integrity of very large capsids.

Keywords:  electron microscopy; head; jumbo phage; structure

Year:  2020        PMID: 32840476     DOI: 10.1099/jgv.0.001487

Source DB:  PubMed          Journal:  J Gen Virol        ISSN: 0022-1317            Impact factor:   3.891


  5 in total

1.  The complete genomic sequence of the novel myovirus RP13 infecting Ralstonia solanacearum, the causative agent of bacterial wilt.

Authors:  Takeru Kawasaki; Hisashi Endo; Hiroyuki Ogata; Orawan Chatchawankanphanich; Takashi Yamada
Journal:  Arch Virol       Date:  2021-01-02       Impact factor: 2.574

2.  Isolation and characterization of vB_XciM_LucasX, a new jumbo phage that infects Xanthomonas citri and Xanthomonas fuscans.

Authors:  Vinícius Marquioni; Fernando Pacheco Nobre Rossi; Deborah Cezar Mendonça; Layla Farage Martins; Franklin Behlau; João Carlos Setubal; Aline Maria da Silva; Maria Teresa Marques Novo-Mansur
Journal:  PLoS One       Date:  2022-04-14       Impact factor: 3.752

Review 3.  Keeping It Together: Structures, Functions, and Applications of Viral Decoration Proteins.

Authors:  Corynne L Dedeo; Carolyn M Teschke; Andrei T Alexandrescu
Journal:  Viruses       Date:  2020-10-14       Impact factor: 5.048

4.  High Resolution Structure of the Mature Capsid of Ralstonia solanacearum Bacteriophage ϕRSA1 by Cryo-Electron Microscopy.

Authors:  Grégory Effantin; Akiko Fujiwara; Takeru Kawasaki; Takashi Yamada; Guy Schoehn
Journal:  Int J Mol Sci       Date:  2021-10-13       Impact factor: 5.923

5.  The DNA polymerase of bacteriophage YerA41 replicates its T-modified DNA in a primer-independent manner.

Authors:  Miguel V Gomez-Raya-Vilanova; Katarzyna Leskinen; Arnab Bhattacharjee; Pasi Virta; Petja Rosenqvist; Jake L R Smith; Oliver W Bayfield; Christina Homberger; Tobias Kerrinnes; Jörg Vogel; Maria I Pajunen; Mikael Skurnik
Journal:  Nucleic Acids Res       Date:  2022-04-22       Impact factor: 19.160

  5 in total

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