Literature DB >> 32840475

ICTV Virus Taxonomy Profile: Nairoviridae.

Aura R Garrison1, Sergey V Alkhovsky Альховский Сергей Владимирович2, Tatjana Avšič-Županc3, Dennis A Bente4, Éric Bergeron5, Felicity Burt6, Nicholas Di Paola1, Koray Ergünay7, Roger Hewson8, Jens H Kuhn9, Ali Mirazimi10, Anna Papa11, Amadou Alpha Sall12, Jessica R Spengler5, Gustavo Palacios1, Ictv Report Consortium.   

Abstract

Members of the family Nairoviridae produce enveloped virions with three single-stranded RNA segments comprising 17.1 to 22.8 kb in total. These viruses are maintained in arthropods and transmitted by ticks to mammals or birds. Crimean-Congo hemorrhagic fever virus is tick-borne and is endemic in most of Asia, Africa, Southern and Eastern Europe whereas Nairobi sheep disease virus, which is also tick-borne, causes lethal haemorrhagic gastroenteritis in small ruminants in Africa and India. This is a summary of the International Committee on Taxonomy of Viruses (ICTV) Report on the family Nairoviridae, which is available at ictv.global/report/nairoviridae.

Entities:  

Keywords:  Bunyavirales; ICTV Report; Nairoviridae; bunyavirus; nairovirus; orthonairovirus; shaspivirus; striwavirus; taxonomy

Year:  2020        PMID: 32840475      PMCID: PMC7641396          DOI: 10.1099/jgv.0.001485

Source DB:  PubMed          Journal:  J Gen Virol        ISSN: 0022-1317            Impact factor:   3.891


Virion

Where known, virions are spherical in shape, 80–120 nm in diameter with a membrane envelope decorated with glycoprotein (GP) spikes composed of GN and GC (Table 1, Fig. 1). Isolated ribonucleoprotein (RNP) complexes are composed of individual segments of genomic RNA encapsidated in nucleocapsid (N) protein. The RNPs are associated with large (L) protein.
Table 1.

Characteristics of members of the family Nairoviridae

Typical member:

Dugbe virus [S segment: AF434161; M segment: M94133; L segment: U15018], species Dugbe orthonairovirus, genus Orthonairovirus.

Virion

Enveloped, spherical virions 80–120 nm in diameter with heterodimer surface spikes

Genome

Three single-stranded, negative-sense RNA molecules, S, M, and L of about 2 kb, about 5 kb, and about 12 kb, respectively

Replication

Cytoplasmic. The nucleocapsid protein (N) encapsidates the genomic RNA forming ribonucleoprotein (RNP) complexes with the viral RNA-directed RNA polymerase (RdRP)-containing large protein (L). Anti-genomic RNAs are generated and serve as templates for synthesis of nascent RNP complexes containing genomic RNA

Translation

From capped mRNAs that lack poly(A) termini. The 5′-cap structure is derived from cellular mRNAs via cap-snatching

Host range

Birds, humans, rodents, hares, shrews, ruminants, bats, ticks (Orthonairovirus); spider vector (Shaspivirus) or water strider vector (Striwavirus) with unknown host range

Taxonomy

Realm Riboviria, phylum Negarnaviricota, class Ellioviricetes, order Bunyavirales; several genera and >15 species

Fig. 1.

(a) Transmission electron micrograph of a Crimean-Congo hemorrhagic fever virus particle. (b) Schematic illustration of a nairovirus particle.

(a) Transmission electron micrograph of a Crimean-Congo hemorrhagic fever virus particle. (b) Schematic illustration of a nairovirus particle. Characteristics of members of the family Nairoviridae Typical member: Dugbe virus [S segment: AF434161; M segment: M94133; L segment: U15018], species Dugbe orthonairovirus, genus Orthonairovirus. Virion Enveloped, spherical virions 80–120 nm in diameter with heterodimer surface spikes Genome Three single-stranded, negative-sense RNA molecules, S, M, and L of about 2 kb, about 5 kb, and about 12 kb, respectively Replication Cytoplasmic. The nucleocapsid protein (N) encapsidates the genomic RNA forming ribonucleoprotein (RNP) complexes with the viral RNA-directed RNA polymerase (RdRP)-containing large protein (L). Anti-genomic RNAs are generated and serve as templates for synthesis of nascent RNP complexes containing genomic RNA Translation From capped mRNAs that lack poly(A) termini. The 5′-cap structure is derived from cellular mRNAs via cap-snatching Host range Birds, humans, rodents, hares, shrews, ruminants, bats, ticks (Orthonairovirus); spider vector (Shaspivirus) or water strider vector (Striwavirus) with unknown host range Taxonomy Realm Riboviria, phylum Negarnaviricota, class Ellioviricetes, order Bunyavirales; several genera and >15 species

Genome

The nairovirus genome (Fig. 2) consists of two to three single-stranded, negative-sense RNA molecules, termed S (small), M (medium; if present), and L (large). These RNAs encode respectively, in the virus-complementary sense, N, the GP precursor (GPC), and L (containing RdRP, helicase, and endonuclease domains).
Fig. 2.

Schematic representation of nairovirus genome organization.

Schematic representation of nairovirus genome organization.

Replication

Virions attach to unknown cell-surface receptors and enter via the endosomal route [1]. Viral fusion with the host cell results in early or late endosomal release of the virion RNP complex into the cytoplasm. This pH-dependent fusion event likely requires the previous participation of an intracellular receptor [1, 2]. During primary transcription the virion-associated L protein generates antigenomic RNAs, which are capped using host-cell-derived capped primers [3]. Translation is by free (L and S segment mRNAs) or membrane-bound (M segment mRNA) ribosomes. Based on evidence from Crimean-Congo hemorrhagic fever virus, GPC is co-translationally cleaved to yield glycosylated GN and GC and non-structural glycoproteins [4]. Antigenome RNA synthesized by the RdRP domain of the L protein serves as a template for genomic RNA replication. Secondary transcription amplifies the synthesis of mRNAs and genome replication. During morphogenesis, GN and GC accumulate in the Golgi, are terminally glycosylated, modified host membranes are acquired, and the virions bud into the Golgi cisternae [5, 6].

Taxonomy

Current taxonomy: ictv.global/report/nairoviridae. Nairoviruses form a family in the polyploviricotine order Bunyavirales, and are most closely related to members of the family Wupedeviridae. Like most other bunyaviruses, nairoviruses (i) have multisegmented, negative-sense single-stranded RNA genomes; (ii) encode proteins with high sequence identity; (iii) have five conserved motifs (A–E) in their RdRP domain; and (iv) produce enveloped virions.

Resources

Current ICTV Report on the family Nairoviridae: ictv.global/report/nairoviridae
  6 in total

1.  Structure and morphogenesis of Dugbe virus (Bunyaviridae, Nairovirus) studied by immunogold electron microscopy of ultrathin cryosections.

Authors:  T F Booth; E A Gould; P A Nuttall
Journal:  Virus Res       Date:  1991-11       Impact factor: 3.303

2.  Crimean-Congo hemorrhagic fever virus utilizes a clathrin- and early endosome-dependent entry pathway.

Authors:  Aura R Garrison; Sheli R Radoshitzky; Krishna P Kota; Gianluca Pegoraro; Gordon Ruthel; Jens H Kuhn; Louis A Altamura; Steven A Kwilas; Sina Bavari; Volker Haucke; Connie S Schmaljohn
Journal:  Virology       Date:  2013-06-19       Impact factor: 3.616

3.  Ultrastructural studies on the replication and morphogenesis of Nairobi sheep disease virus, a Nairovirus.

Authors:  P M Rwambo; M K Shaw; F R Rurangirwa; J C DeMartini
Journal:  Arch Virol       Date:  1996       Impact factor: 2.574

4.  Recovery of Recombinant Crimean Congo Hemorrhagic Fever Virus Reveals a Function for Non-structural Glycoproteins Cleavage by Furin.

Authors:  Éric Bergeron; Marko Zivcec; Ayan K Chakrabarti; Stuart T Nichol; César G Albariño; Christina F Spiropoulou
Journal:  PLoS Pathog       Date:  2015-05-01       Impact factor: 6.823

5.  Crimean-Congo hemorrhagic fever virus entry into host cells occurs through the multivesicular body and requires ESCRT regulators.

Authors:  Olena Shtanko; Raisa A Nikitina; Cengiz Z Altuntas; Alexander A Chepurnov; Robert A Davey
Journal:  PLoS Pathog       Date:  2014-09-18       Impact factor: 6.823

6.  Biochemical and structural studies reveal differences and commonalities among cap-snatching endonucleases from segmented negative-strand RNA viruses.

Authors:  Tobias Holm; Janine-Denise Kopicki; Carola Busch; Silke Olschewski; Maria Rosenthal; Charlotte Uetrecht; Stephan Günther; Sophia Reindl
Journal:  J Biol Chem       Date:  2018-10-22       Impact factor: 5.157

  6 in total
  8 in total

1.  High Diversity of Novel Viruses in the Tree Pathogen Phytophthora castaneae Revealed by High-Throughput Sequencing of Total and Small RNA.

Authors:  Milica Raco; Eeva J Vainio; Suvi Sutela; Aleš Eichmeier; Eliška Hakalová; Thomas Jung; Leticia Botella
Journal:  Front Microbiol       Date:  2022-06-16       Impact factor: 6.064

Review 2.  Host Cell Restriction Factors of Bunyaviruses and Viral Countermeasures.

Authors:  Solène Lerolle; Natalia Freitas; François-Loïc Cosset; Vincent Legros
Journal:  Viruses       Date:  2021-04-28       Impact factor: 5.048

Review 3.  Recent Progress on Tick-Borne Animal Diseases of Veterinary and Public Health Significance in China.

Authors:  Weijuan Jia; Si Chen; Shanshan Chi; Yunjiang He; Linzhu Ren; Xueli Wang
Journal:  Viruses       Date:  2022-02-09       Impact factor: 5.048

4.  Genomic characterization and phylogenetic analysis of a novel Nairobi sheep disease genogroup Orthonairovirus from ticks, Southeastern China.

Authors:  Xu Zhang; Hang-Yuan Li; Jian-Wei Shao; Ming-Chao Pei; Chong Cao; Fu-Qiang Huang; Ming-Fei Sun
Journal:  Front Microbiol       Date:  2022-08-25       Impact factor: 6.064

5.  Development of anti-Crimean-Congo hemorrhagic fever virus Gc and NP-specific ELISA for detection of antibodies in domestic animal sera.

Authors:  Sandra Belij-Rammerstorfer; Georgina Limon; Emmanuel A Maze; Kayleigh Hannant; Ellen Hughes; Simona R Tchakarova; Tsviatko Alexandrov; Blandina T Mmbaga; Brian Willett; George Booth; Nicholas A Lyons; Natalie Baker; Kelly M Thomas; Daniel Wright; Jack Saunders; Clare Browning; Ginette Wilsden; Miles Carroll; Roger Hewson; Bryan Charleston; Teresa Lambe; Anna B Ludi
Journal:  Front Vet Sci       Date:  2022-08-25

6.  Virus Diversity, Abundance, and Evolution in Three Different Bat Colonies in Switzerland.

Authors:  Myriam Anja Wiederkehr; Weihong Qi; Katja Schoenbaechler; Cornel Fraefel; Jakub Kubacki
Journal:  Viruses       Date:  2022-08-29       Impact factor: 5.818

Review 7.  Epidemiological Aspects of Crimean-Congo Hemorrhagic Fever in Western Europe: What about the Future?

Authors:  Aránzazu Portillo; Ana M Palomar; Paula Santibáñez; José A Oteo
Journal:  Microorganisms       Date:  2021-03-21

Review 8.  Crimean-Congo Hemorrhagic Fever Virus: Current Advances and Future Prospects of Antiviral Strategies.

Authors:  Shiyu Dai; Fei Deng; Hualin Wang; Yunjia Ning
Journal:  Viruses       Date:  2021-06-22       Impact factor: 5.048

  8 in total

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