Literature DB >> 32839178

Short, Rich, and Powerful: a New Family of Arginine-Rich Small Proteins Have Outsized Impact in Agrobacterium tumefaciens.

Melene A Alakavuklar1, Clay Fuqua2.   

Abstract

Due to minute size and limited sequence complexity, small proteins can be challenging to identify but are emerging as important regulators of diverse processes in bacteria. In this issue of the Journal of Bacteriology, Kraus and coworkers (A. Kraus, M. Weskamp, J. Zierles, M. Balzer, et al., J Bacteriol 202:e00309-20, 2020, https://doi.org/10.1128/JB.00309-20) report a comprehensive analysis of a fascinating subfamily of arginine-rich small proteins in Agrobacterium tumefaciens, conserved among Alphaproteobacteria Their findings reveal that these small proteins are under complex regulation and have a disproportionately large impact on metabolism and behavior.
Copyright © 2020 American Society for Microbiology.

Entities:  

Keywords:  Agrobacterium tumefacienszzm321990; Alphaproteobacteriazzm321990; biofilms; domain of unknown function; metabolic control; regulatory RNA; small proteins

Mesh:

Substances:

Year:  2020        PMID: 32839178      PMCID: PMC7585062          DOI: 10.1128/JB.00450-20

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  22 in total

Review 1.  Small proteins can no longer be ignored.

Authors:  Gisela Storz; Yuri I Wolf; Kumaran S Ramamurthi
Journal:  Annu Rev Biochem       Date:  2014-03-03       Impact factor: 23.643

Review 2.  Escherichia coli Small Proteome.

Authors:  Matthew R Hemm; Jeremy Weaver; Gisela Storz
Journal:  EcoSal Plus       Date:  2020-05

3.  Genetic analysis of Agrobacterium tumefaciens unipolar polysaccharide production reveals complex integrated control of the motile-to-sessile switch.

Authors:  Jing Xu; Jinwoo Kim; Benjamin J Koestler; Jeong-Hyeon Choi; Christopher M Waters; Clay Fuqua
Journal:  Mol Microbiol       Date:  2013-07-29       Impact factor: 3.501

4.  Phosphorus limitation increases attachment in Agrobacterium tumefaciens and reveals a conditional functional redundancy in adhesin biosynthesis.

Authors:  Jing Xu; Jinwoo Kim; Thomas Danhorn; Peter M Merritt; Clay Fuqua
Journal:  Res Microbiol       Date:  2012-10-24       Impact factor: 3.992

Review 5.  Agrobacterium tumefaciens as an agent of disease.

Authors:  Matthew A Escobar; Abhaya M Dandekar
Journal:  Trends Plant Sci       Date:  2003-08       Impact factor: 18.313

6.  Characterization of Three Small Proteins in Brucella abortus Linked to Fucose Utilization.

Authors:  James A Budnick; Lauren M Sheehan; Lin Kang; Pawel Michalak; Clayton C Caswell
Journal:  J Bacteriol       Date:  2018-08-24       Impact factor: 3.490

7.  Protein domains of unknown function are essential in bacteria.

Authors:  Norman F Goodacre; Dietlind L Gerloff; Peter Uetz
Journal:  MBio       Date:  2013-12-31       Impact factor: 7.867

8.  InterPro in 2019: improving coverage, classification and access to protein sequence annotations.

Authors:  Alex L Mitchell; Teresa K Attwood; Patricia C Babbitt; Matthias Blum; Peer Bork; Alan Bridge; Shoshana D Brown; Hsin-Yu Chang; Sara El-Gebali; Matthew I Fraser; Julian Gough; David R Haft; Hongzhan Huang; Ivica Letunic; Rodrigo Lopez; Aurélien Luciani; Fabio Madeira; Aron Marchler-Bauer; Huaiyu Mi; Darren A Natale; Marco Necci; Gift Nuka; Christine Orengo; Arun P Pandurangan; Typhaine Paysan-Lafosse; Sebastien Pesseat; Simon C Potter; Matloob A Qureshi; Neil D Rawlings; Nicole Redaschi; Lorna J Richardson; Catherine Rivoire; Gustavo A Salazar; Amaia Sangrador-Vegas; Christian J A Sigrist; Ian Sillitoe; Granger G Sutton; Narmada Thanki; Paul D Thomas; Silvio C E Tosatto; Siew-Yit Yong; Robert D Finn
Journal:  Nucleic Acids Res       Date:  2019-01-08       Impact factor: 16.971

9.  Cryptic-Prophage-Encoded Small Protein DicB Protects Escherichia coli from Phage Infection by Inhibiting Inner Membrane Receptor Proteins.

Authors:  Preethi T Ragunathan; Carin K Vanderpool
Journal:  J Bacteriol       Date:  2019-11-05       Impact factor: 3.490

10.  Functional determinants of a small protein controlling a broadly conserved bacterial sensor kinase.

Authors:  Srujana S Yadavalli; Ted Goh; Jeffrey N Carey; Gabriele Malengo; Sangeevan Vellappan; Bryce E Nickels; Victor Sourjik; Mark Goulian; Jing Yuan
Journal:  J Bacteriol       Date:  2020-06-01       Impact factor: 3.490

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.