Literature DB >> 32833316

Regulating CRISPR/Cas9 Function through Conditional Guide RNA Control.

Wes Brown1, Wenyuan Zhou1, Alexander Deiters1.   

Abstract

Conditional control of CRISPR/Cas9 has been developed by using a variety of different approaches, many focusing on manipulation of the Cas9 protein itself. However, more recent strategies for governing CRISPR/Cas9 function are based on guide RNA (gRNA) modifications. They include control of gRNAs by light, small molecules, proteins, and oligonucleotides. These designs have unique advantages compared to other approaches and have allowed precise regulation of gene editing and transcription. Here, we discuss strategies for conditional control of gRNA function and compare effectiveness of these methods.
© 2020 Wiley-VCH GmbH.

Entities:  

Keywords:  CRISPR; Cas9; gene editing; nucleic acid; optical control; protection groups

Mesh:

Substances:

Year:  2020        PMID: 32833316      PMCID: PMC7928076          DOI: 10.1002/cbic.202000423

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  119 in total

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Authors:  Hélène Deveau; Josiane E Garneau; Sylvain Moineau
Journal:  Annu Rev Microbiol       Date:  2010       Impact factor: 15.500

Review 2.  The New State of the Art: Cas9 for Gene Activation and Repression.

Authors:  Marie F La Russa; Lei S Qi
Journal:  Mol Cell Biol       Date:  2015-09-14       Impact factor: 4.272

Review 3.  Principles and Applications of Nucleic Acid Strand Displacement Reactions.

Authors:  Friedrich C Simmel; Bernard Yurke; Hari R Singh
Journal:  Chem Rev       Date:  2019-02-04       Impact factor: 60.622

Review 4.  In Silico Meets In Vivo: Towards Computational CRISPR-Based sgRNA Design.

Authors:  Guo-Hui Chuai; Qi-Long Wang; Qi Liu
Journal:  Trends Biotechnol       Date:  2016-07-11       Impact factor: 19.536

5.  Control of CRISPR-Cas9 with small molecule-activated allosteric aptamer regulating sgRNAs.

Authors:  Bingqian Lin; Yuan An; Lingyan Meng; Huimin Zhang; Jia Song; Zhi Zhu; Wen Liu; Yanling Song; Chaoyong Yang
Journal:  Chem Commun (Camb)       Date:  2019-10-08       Impact factor: 6.222

6.  Nucleic Acid Strand Displacement with Synthetic mRNA Inputs in Living Mammalian Cells.

Authors:  Gourab Chatterjee; Yuan-Jyue Chen; Georg Seelig
Journal:  ACS Synth Biol       Date:  2018-11-20       Impact factor: 5.110

7.  Switching the activity of Cas12a using guide RNA strand displacement circuits.

Authors:  Lukas Oesinghaus; Friedrich C Simmel
Journal:  Nat Commun       Date:  2019-05-07       Impact factor: 14.919

8.  High-throughput profiling of off-target DNA cleavage reveals RNA-programmed Cas9 nuclease specificity.

Authors:  Vikram Pattanayak; Steven Lin; John P Guilinger; Enbo Ma; Jennifer A Doudna; David R Liu
Journal:  Nat Biotechnol       Date:  2013-08-11       Impact factor: 54.908

9.  Profiling of engineering hotspots identifies an allosteric CRISPR-Cas9 switch.

Authors:  Benjamin L Oakes; Dana C Nadler; Avi Flamholz; Christof Fellmann; Brett T Staahl; Jennifer A Doudna; David F Savage
Journal:  Nat Biotechnol       Date:  2016-05-02       Impact factor: 54.908

10.  Synthetic far-red light-mediated CRISPR-dCas9 device for inducing functional neuronal differentiation.

Authors:  Jiawei Shao; Meiyan Wang; Guiling Yu; Sucheng Zhu; Yuanhuan Yu; Boon Chin Heng; Jiali Wu; Haifeng Ye
Journal:  Proc Natl Acad Sci U S A       Date:  2018-07-02       Impact factor: 11.205

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  1 in total

1.  Photoactivatable nanoCRISPR/Cas9 System Based on crRNA Reversibly Immobilized on Carbon Nanoparticles.

Authors:  Olga Semikolenova; Lubov Sakovina; Elizaveta Akhmetova; Daria Kim; Ivan Vokhtantsev; Victor Golyshev; Mariya Vorobyeva; Sergey Novopashin; Darya Novopashina
Journal:  Int J Mol Sci       Date:  2021-10-09       Impact factor: 5.923

  1 in total

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