Literature DB >> 32831438

Detecting and Testing Altered Brain Connectivity Networks with K-partite Network Topology.

Shuo Chen1,2, F DuBois Bowman3, Yishi Xing4.   

Abstract

Emerging brain connectivity network studies suggest that interactions between various distributed neuronal populations may be characterized by an organized complex topological structure. Many neuropsychiatric disorders are associated with altered topological patterns of brain connectivity. Therefore, a key inquiry of connectivity analysis is to detect group-level differentially expressed connectome patterns from the massive neuroimaging data. Recently, statistical methods have been developed to detect differentially expressed connectivity features at a subnetwork level, extending more commonly applied edge level analysis. However, the graph topological structures in these methods are limited to community/cliques which may not effectively uncover the underlying complex and disease-related brain circuits/subnetworks. Building on these previous subnetwork detection methods, a new statistical approach is developed to automatically identify the latent differentially expressed brain connectivity subnetworks with k-partite graph topological structures from large brain connectivity matrices. In addition, statistical inferential techniques are provided to test the detected topological structure. The new methods are evaluated via extensive simulation studies and then applied to resting state fMRI data (24 cases and 18 controls) for Parkinson's disease research. A differentially expressed connectivity network with the k-partite graph topological structure is detected which reveals underlying neural features distinguishing Parkinson's disease patients from healthy control subjects.

Entities:  

Keywords:  Parkinson’s disease; brain network statistics; connectivity; k-partite graph; network topological statistics

Year:  2019        PMID: 32831438      PMCID: PMC7442212          DOI: 10.1016/j.csda.2019.06.007

Source DB:  PubMed          Journal:  Comput Stat Data Anal        ISSN: 0167-9473            Impact factor:   1.681


  56 in total

1.  On the use of correlation as a measure of network connectivity.

Authors:  Andrew Zalesky; Alex Fornito; Ed Bullmore
Journal:  Neuroimage       Date:  2012-02-11       Impact factor: 6.556

2.  A Bayesian hierarchical framework for spatial modeling of fMRI data.

Authors:  F DuBois Bowman; Brian Caffo; Susan Spear Bassett; Clinton Kilts
Journal:  Neuroimage       Date:  2007-08-24       Impact factor: 6.556

3.  A functional MRI study of automatic movements in patients with Parkinson's disease.

Authors:  Tao Wu; Mark Hallett
Journal:  Brain       Date:  2005-06-15       Impact factor: 13.501

4.  A two-part mixed-effects modeling framework for analyzing whole-brain network data.

Authors:  Sean L Simpson; Paul J Laurienti
Journal:  Neuroimage       Date:  2015-03-19       Impact factor: 6.556

5.  Occipital hypoperfusion in Parkinson's disease without dementia: correlation to impaired cortical visual processing.

Authors:  Y Abe; T Kachi; T Kato; Y Arahata; T Yamada; Y Washimi; K Iwai; K Ito; N Yanagisawa; G Sobue
Journal:  J Neurol Neurosurg Psychiatry       Date:  2003-04       Impact factor: 10.154

6.  Modeling the spatial and temporal dependence in FMRI data.

Authors:  Gordana Derado; F DuBois Bowman; Clinton D Kilts
Journal:  Biometrics       Date:  2010-09       Impact factor: 2.571

7.  A Bayesian hierarchical framework for modeling brain connectivity for neuroimaging data.

Authors:  Shuo Chen; F DuBois Bowman; Helen S Mayberg
Journal:  Biometrics       Date:  2015-10-26       Impact factor: 2.571

Review 8.  Complex brain networks: graph theoretical analysis of structural and functional systems.

Authors:  Ed Bullmore; Olaf Sporns
Journal:  Nat Rev Neurosci       Date:  2009-02-04       Impact factor: 34.870

Review 9.  Imaging human connectomes at the macroscale.

Authors:  R Cameron Craddock; Saad Jbabdi; Chao-Gan Yan; Joshua T Vogelstein; F Xavier Castellanos; Adriana Di Martino; Clare Kelly; Keith Heberlein; Stan Colcombe; Michael P Milham
Journal:  Nat Methods       Date:  2013-06       Impact factor: 28.547

10.  An empirical Bayes normalization method for connectivity metrics in resting state fMRI.

Authors:  Shuo Chen; Jian Kang; Guoqing Wang
Journal:  Front Neurosci       Date:  2015-09-16       Impact factor: 4.677

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2.  Characterizing the Complexity of Weighted Networks via Graph Embedding and Point Pattern Analysis.

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Journal:  Entropy (Basel)       Date:  2020-08-23       Impact factor: 2.524

3.  Learning Clique Subgraphs in Structural Brain Network Classification with Application to Crystallized Cognition.

Authors:  Lu Wang; Feng Vankee Lin; Martin Cole; Zhengwu Zhang
Journal:  Neuroimage       Date:  2020-10-24       Impact factor: 6.556

  3 in total

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