Literature DB >> 32821281

The evolution of metapopulation dynamics and the number of stem cells in intestinal crypts and other tissue structures in multicellular bodies.

David Birtwell1, Georg Luebeck2, Carlo C Maley3.   

Abstract

Carcinogenesis is a process of somatic evolution. Previous models of stem and transient amplifying cells in epithelial proliferating units like colonic crypts showed that intermediate numbers of stem cells in a crypt should optimally prevent progression to cancer. If a stem cell population is too small, it is easy for a mutator mutation to drift to fixation. If it is too large, it is easy for selection to drive cell fitness enhancing carcinogenic mutations to fixation. Here, we show that a multiscale microsimulation, that captures both within-crypt and between-crypt evolutionary dynamics, leads to a different conclusion. Epithelial tissues are metapopulations of crypts. We measured time to initiation of a neoplasm, implemented as inactivation of both alleles of a tumor suppressor gene. In our model, time to initiation is dependent on the spread of mutator clones in the crypts. The proportion of selectively beneficial and deleterious mutations in somatic cells is unknown and so was explored with a parameter. When the majority of non-neutral mutations are deleterious, the fitness of mutator clones tends to decline. When crypts are maintained by few stem cells, intercrypt competition tends to remove crypts with fixed mutators. When there are many stem cells within a crypt, there is virtually no crypt turnover, but mutator clones are suppressed by within-crypt competition. If the majority of non-neutral mutations are beneficial to the clone, then these results are reversed and intermediate-sized crypts provide the most protection against initiation. These results highlight the need to understand the dynamics of turnover and the mechanisms that control homeostasis, both at the level of stem cells within proliferative units and at the tissue level of competing proliferative units. Determining the distribution of fitness effects of somatic mutations will also be crucial to understanding the dynamics of tumor initiation and progression.
© 2020 The Authors. Evolutionary Applications published by John Wiley & Sons Ltd.

Entities:  

Keywords:  cancer; evolution; initiation; metapopulation dynamics; neoplastic progression; simulation

Year:  2020        PMID: 32821281      PMCID: PMC7428809          DOI: 10.1111/eva.13069

Source DB:  PubMed          Journal:  Evol Appl        ISSN: 1752-4571            Impact factor:   5.183


  45 in total

1.  Patterns of cell division and the risk of cancer.

Authors:  Steven A Frank; Yoh Iwasa; Martin A Nowak
Journal:  Genetics       Date:  2003-04       Impact factor: 4.562

Review 2.  Evolution experiments with microorganisms: the dynamics and genetic bases of adaptation.

Authors:  Santiago F Elena; Richard E Lenski
Journal:  Nat Rev Genet       Date:  2003-06       Impact factor: 53.242

3.  Negative clonal selection in tumor evolution.

Authors:  Robert A Beckman; Lawrence A Loeb
Journal:  Genetics       Date:  2005-09-02       Impact factor: 4.562

Review 4.  Cancer, aging and the optimal tissue design.

Authors:  Natalia L Komarova
Journal:  Semin Cancer Biol       Date:  2005-12       Impact factor: 15.707

5.  A functional assay for mutations in tumor suppressor genes caused by mismatch repair deficiency.

Authors:  H P Ji; M C King
Journal:  Hum Mol Genet       Date:  2001-11-15       Impact factor: 6.150

6.  Human cancers express a mutator phenotype.

Authors:  Jason H Bielas; Keith R Loeb; Brian P Rubin; Lawrence D True; Lawrence A Loeb
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-15       Impact factor: 11.205

7.  Clonal expansions in ulcerative colitis identify patients with neoplasia.

Authors:  Jesse J Salk; Stephen J Salipante; Rosa Ana Risques; David A Crispin; Lin Li; Mary P Bronner; Teresa A Brentnall; Peter S Rabinovitch; Marshall S Horwitz; Lawrence A Loeb
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-19       Impact factor: 11.205

Review 8.  The significance of unstable chromosomes in colorectal cancer.

Authors:  Harith Rajagopalan; Martin A Nowak; Bert Vogelstein; Christoph Lengauer
Journal:  Nat Rev Cancer       Date:  2003-09       Impact factor: 60.716

9.  Bulk Genotyping of Biopsies Can Create Spurious Evidence for Hetereogeneity in Mutation Content.

Authors:  Rumen Kostadinov; Carlo C Maley; Mary K Kuhner
Journal:  PLoS Comput Biol       Date:  2016-04-22       Impact factor: 4.475

10.  Evolution of Barrett's esophagus through space and time at single-crypt and whole-biopsy levels.

Authors:  Pierre Martinez; Diego Mallo; Thomas G Paulson; Xiaohong Li; Carissa A Sanchez; Brian J Reid; Trevor A Graham; Mary K Kuhner; Carlo C Maley
Journal:  Nat Commun       Date:  2018-02-23       Impact factor: 14.919

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  1 in total

1.  Aspirin's effect on kinetic parameters of cells contributes to its role in reducing incidence of advanced colorectal adenomas, shown by a multiscale computational study.

Authors:  Yifan Wang; C Richard Boland; Ajay Goel; Dominik Wodarz; Natalia L Komarova
Journal:  Elife       Date:  2022-04-13       Impact factor: 8.713

  1 in total

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