Literature DB >> 32818479

Some like it translated: small ORFs in the 5'UTR.

Peter F Renz1, Fabiola Valdivia-Francia2, Ataman Sendoel3.   

Abstract

The 5' untranslated region (5'UTR) is critical in determining post-transcriptional control, which is partly mediated by short upstream open reading frames (uORFs) present in half of mammalian transcripts. uORFs are generally considered to provide functionally important repression of the main-ORF by engaging initiating ribosomes, but under specific environmental conditions such as cellular stress, uORFs can become essential to activate the translation of the main coding sequence. In addition, a growing number of uORF-encoded bioactive microproteins have been described, which have the potential to significantly increase cellular protein diversity. Here we review the diverse cellular contexts in which uORFs play a critical role and discuss the molecular mechanisms underlying their function and regulation. The progress over the last decades in dissecting uORF function suggests that the 5'UTR remains an exciting frontier towards understanding how the cellular proteome is shaped in health and disease.
Copyright © 2020 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  5'UTR; Development and Disease; Gene expression regulation; Translational regulation; uORFs

Year:  2020        PMID: 32818479     DOI: 10.1016/j.yexcr.2020.112229

Source DB:  PubMed          Journal:  Exp Cell Res        ISSN: 0014-4827            Impact factor:   3.905


  9 in total

Review 1.  Rules are made to be broken: a "simple" model organism reveals the complexity of gene regulation.

Authors:  Andrea L Higdon; Gloria A Brar
Journal:  Curr Genet       Date:  2020-11-01       Impact factor: 3.886

Review 2.  Degradation-Independent Inhibition of APOBEC3G by the HIV-1 Vif Protein.

Authors:  Benjamin Stupfler; Cédric Verriez; Sarah Gallois-Montbrun; Roland Marquet; Jean-Christophe Paillart
Journal:  Viruses       Date:  2021-04-03       Impact factor: 5.048

3.  Translational control of E2f1 regulates the Drosophila cell cycle.

Authors:  Jan Inge Øvrebø; Mary-Rose Bradley-Gill; Norman Zielke; Minhee Kim; Marco Marchetti; Jonathan Bohlen; Megan Lewis; Monique van Straaten; Nam-Sung Moon; Bruce A Edgar
Journal:  Proc Natl Acad Sci U S A       Date:  2022-01-25       Impact factor: 12.779

4.  Widespread translational control regulates retinal development in mouse.

Authors:  Kaining Chen; Congying Chen; Huihui Li; Jiaqi Yang; Mengqing Xiang; Hongwei Wang; Zhi Xie
Journal:  Nucleic Acids Res       Date:  2021-09-27       Impact factor: 16.971

5.  In-Depth Annotation of the Drosophila Bithorax-Complex Reveals the Presence of Several Alternative ORFs That Could Encode for Motif-Rich Peptides.

Authors:  Magali Naville; Samir Merabet
Journal:  Cells       Date:  2021-11-02       Impact factor: 6.600

Review 6.  Short open reading frames (sORFs) and microproteins: an update on their identification and validation measures.

Authors:  Alyssa Zi-Xin Leong; Pey Yee Lee; M Aiman Mohtar; Saiful Effendi Syafruddin; Yuh-Fen Pung; Teck Yew Low
Journal:  J Biomed Sci       Date:  2022-03-17       Impact factor: 8.410

Review 7.  NADPH and Mitochondrial Quality Control as Targets for a Circadian-Based Fasting and Exercise Therapy for the Treatment of Parkinson's Disease.

Authors:  William M Curtis; William A Seeds; Mark P Mattson; Patrick C Bradshaw
Journal:  Cells       Date:  2022-08-04       Impact factor: 7.666

Review 8.  Sensing, signaling and surviving mitochondrial stress.

Authors:  Eva-Maria Eckl; Olga Ziegemann; Luisa Krumwiede; Evelyn Fessler; Lucas T Jae
Journal:  Cell Mol Life Sci       Date:  2021-07-06       Impact factor: 9.261

9.  A Conserved uORF Regulates APOBEC3G Translation and Is Targeted by HIV-1 Vif Protein to Repress the Antiviral Factor.

Authors:  Camille Libre; Tanja Seissler; Santiago Guerrero; Julien Batisse; Cédric Verriez; Benjamin Stupfler; Orian Gilmer; Romina Cabrera-Rodriguez; Melanie M Weber; Agustin Valenzuela-Fernandez; Andrea Cimarelli; Lucie Etienne; Roland Marquet; Jean-Christophe Paillart
Journal:  Biomedicines       Date:  2021-12-22
  9 in total

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