| Literature DB >> 32809235 |
Arnold Piek1, Navin Suthahar1, Adriaan A Voors1, Rudolf A de Boer1, Herman H W Silljé1.
Abstract
AIMS: Cardiac specificity provides an advantage in correlating heart failure (HF) biomarker plasma levels with indices of cardiac function and remodelling, as shown for natriuretic peptides. Using bioinformatics, we explored the cardiac specificity of secreted proteins and investigated in more detail the relationship of Dickkopf-3 (DKK3) gene expression and DKK3 plasma concentrations with cardiac function and remodelling in (pre)clinical studies. METHODS ANDEntities:
Keywords: Biomarker; Cardiac specificity; DKK3; Heart failure; Natriuretic peptides
Mesh:
Substances:
Year: 2020 PMID: 32809235 PMCID: PMC7756877 DOI: 10.1002/ejhf.1988
Source DB: PubMed Journal: Eur J Heart Fail ISSN: 1388-9842 Impact factor: 15.534
Figure 1Cardiac specificity of the human genome and heart failure (HF) biomarkers. (A) Schematic depiction of the bioinformatics approach. Gene expression data as measured by RNAseq in all organs and tissues of healthy humans were used. Included are adipose tissue, adrenal gland, appendix, bone marrow, brain, colon, duodenum, gall bladder, heart, kidney, liver, lung, lymph node, oesophagus, pancreas, salivary gland, skin, small intestine, spleen, stomach and thyroid gland. Sex‐specific organs or tissues were the prostate and testis for males, and endometrium and ovary for females. The cardiac specificity of genes was calculated by the formula shown. Finally, genes assumed to encode for secreted proteins were selected. (B) The cardiac specificity of the human genome (top) and of secreted protein encoding genes (bottom, showing the numbers of included genes. Coloured areas represent the amount of genes with the corresponding degree of specificity. Data include those for male tissues. (C) Cardiac specificity of several HF biomarkers. Coloured areas represent organ specificity. Data include those for male tissues. Gal‐3 (LGALS3), galectin‐3; GDF‐15, growth differentiation factor 15; GI tract, gastrointestinal tract, including appendix, colon, duodenum, oesophagus, small intestine and stomach; NPPB, natriuretic peptide precursor type B; TIMP‐1, tissue inhibitor of metalloproteinase 1; Sex organs, prostate and testis. The bioinformatics analysis was based on publicly available RNAseq data previously published by Fagerberg et al.
Figure 2The cardiac specificity of secreted protein encoding genes. The total cardiac expression of secreted protein encoding genes was plotted against their calculated cardiac specificity. All genes with cardiac specificity of >10% are shown. Gene name abbreviations are used for readability. Organs and tissues include adipose tissue, adrenal gland, appendix, bone marrow, brain, colon, duodenum, gall bladder, heart, kidney, liver, lung, lymph node, oesophagus, pancreas, salivary gland, skin, small intestine, spleen, stomach and thyroid gland, and sex‐specific organs or tissues for males (prostate and testis). The bioinformatics analysis was based on publicly available RNAseq data previously published by Fagerberg et al.
Figure 3Cardiac gene expression and plasma concentrations of ANP and DKK3 in three different heart failure (HF) mouse models. Included HF models are transverse aortic constriction (TAC) (top row), myocardial infarction (MI) (middle row) and an obese/hypertension mouse model with HF with preserved ejection fraction characteristics (HFD + AngII, bottom row). (A) Natriuretic peptide precursor type A (Nppa) left ventricular (LV) gene expression (left) and N‐terminal pro‐atrial natriuretic peptide (NT‐proANP) plasma concentrations (right). Data on Nppa and NT‐proANP have been published previously, but are presented here for convenience. (B) Dickkopf‐3 (Dkk3) gene expression (left) and DKK3 plasma concentrations (right). Gene expression values are corrected for 36b4 gene expression and presented as fold change. Bars represent means. Error bars represent standard errors of the mean. *P < 0.05 vs. sham or low fat diet. #P < 0.05 vs. HFD. AngII, angiotensin‐II; HFD, high fat diet; LFD, low fat diet.
Baseline characteristics of heart failure patients according to blood plasma DKK3 quintiles
| DKK3, ng/mL |
| ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Q1: <38.8 | Q2: 38.8–45.7 | Q3: 45.8–53.2 | Q4: 53.3–65.8 | Q5: >65.8 | |||||||
| ( | ( | ( | ( | ( | |||||||
| Clinical characteristic | |||||||||||
| Age, years, mean ± SD | 61 ± 3 | 66 ± 12 | 70 ± 11 | 72 ± 11 | 73 ± 10 | <0.001 | |||||
| Male sex, | 300 (71.8) | 323 (77.3) | 306 (73.2) | 304 (72.7) | 301 (72.0) | 0.552 | |||||
| White race, | 415 (99.3) | 411 (98.3) | 414 (99.0) | 415 (99.3) | 412 (98.6) | 0.767 | |||||
| BMI, kg/m2, median (IQR) | 28 (25–33) | 28 (24–31) | 27 (24–31) | 26 (24–30) | 26 (23–29) | <0.001 | |||||
| SBP, mmHg, median (IQR) | 120 (110–138) | 125 (110–140) | 124 (110–140) | 120 (110–140) | 120 (108–130) | 0.002 | |||||
| eGFR, mL/min/1.73 m2, median (IQR) | 77.8 (59.3–92.2) | 63.1 (47.2–79.3) | 59.6 (45.2–75.5) | 53.5 (42.1–69.6) | 45.8 (31.9–62.2) | <0.001 | |||||
| Current AF, | 80 (20.9) | 123 (33.4) | 146 (41.6) | 163 (48.1) | 180 (53.3) | <0.001 | |||||
| NYHA class III or IV, | 232 (57.1) | 231 (57.0) | 258 (62.9) | 257 (64.4) | 270 (66.0) | 0.001 | |||||
| Peripheral oedema, | 168 (50.8) | 188 (53.9) | 207 (57.3) | 218 (64.1) | 241 (68.9) | <0.001 | |||||
| Current smoker, | 91 (21.8) | 78 (18.7) | 55 (13.2) | 44 (10.6) | 40 (9.6) | <0.001 | |||||
| Echocardiography | |||||||||||
| LVEF, %, median (IQR) | 30 (25–36) | 30 (25–35) | 30 (25–38) | 30 (25–35) | 30 (25–38) | 0.069 | |||||
| LVEDD, mm, mean ± SD | 62 ± 10 | 62 ± 9 | 61 ± 9 | 60 ± 10 | 60 ± 10 | 0.003 | |||||
| LVESD, mm, mean ± SD | 51 ± 12 | 50 ± 11 | 50 ± 11 | 50 ± 11 | 49 ± 12 | 0.134 | |||||
| Interventricular WT, mm, median (IQR) | 10 (9–12) | 10 (9–12) | 10 (9–12) | 10 (9–12) | 10 (9–12) | 0.207 | |||||
| Posterior WT, mm, median (IQR) | 10 (9–11) | 10 (9–11) | 10 (9–12) | 10 (9–11) | 10 (9–12) | 0.328 | |||||
| Left atrial diameter, mm, mean ± SD | 46 ± 7 | 47 ± 7 | 48 ± 7 | 47 ± 9 | 48 ± 9 | 0.009 | |||||
| Mitral valve regurgitation, | 149 (38.3) | 190 (48.1) | 191 (47.4) | 194 (48.4) | 201 (50.8) | 0.002 | |||||
| Medical history, | |||||||||||
| HF hospitalization in past year | 113 (27.0) | 132 (31.6) | 122 (29.2) | 136 (32.5) | 150 (35.9) | 0.009 | |||||
| Myocardial infarction | 140 (33.5) | 155 (37.1) | 153 (36.6) | 165 (39.5) | 164 (39.2) | 0.063 | |||||
| Stroke | 31 (7.4) | 33 (7.9) | 44 (10.5) | 36 (8.6) | 58 (13.9) | 0.003 | |||||
| Peripheral arterial disease | 45 (10.8) | 45 (10.8) | 48 (11.5) | 43 (10.3) | 48 (11.5) | 0.843 | |||||
| Diabetes | 133 (31.8) | 138 (33.0) | 134 (32.1) | 141 (33.7) | 121 (28.9) | 0.486 | |||||
| COPD | 59 (14.1) | 73 (17.5) | 85 (20.3) | 75 (17.9) | 64 (15.3) | 0.621 | |||||
| Medication, | |||||||||||
| Beta‐blocker | 358 (85.6) | 352 (84.2) | 344 (82.3) | 335 (80.1) | 348 (83.3) | 0.127 | |||||
| ACEi/ARB | 325 (77.8) | 313 (74.9) | 286 (68.4) | 287 (68.7) | 288 (68.9) | <0.001 | |||||
| Aldosterone antagonist | 248 (59.3) | 213 (51.0) | 229 (54.8) | 220 (52.6) | 187 (44.7) | <0.001 | |||||
| Diuretics | 418 (100.0) | 418 (100.0) | 416 (99.5) | 418 (100.0) | 418 (100.0) | 1.000 | |||||
| Blood laboratory values | |||||||||||
| Haemoglobin, g/dL, mean ± SD | 13.4 ± 1.8 | 13.3 ± 1.9 | 13.2 ± 1.9 | 13.1 ± 1.9 | 12.8 ± 1.9 | 0.541 | |||||
| Haematocrit, %, mean ± SD | 40.5 ± 4.9 | 40.3 ± 5.4 | 40.0 ± 5.3 | 39.8 ± 5.4 | 39.1 ± 5.4 | 0.880 | |||||
| BUN, mmol/L, median (IQR) | 8.3 (6.0–13.7) | 10.4 (7.5–17.1) | 11.1 (7.4–17.9) | 11.1 (8.0–18.2) | 13.9 (9.3–22.5) | <0.001 | |||||
| Sodium, mmol/L, median (IQR) | 140 (137–141) | 139 (137–141) | 140 (137–142) | 140 (138–141) | 139 (136–142) | 0.964 | |||||
| Potassium, mmol/L, median (IQR) | 4.2 (3.9–4.5) | 4.3 (3.9–4.7) | 4.3 (3.9–4.6) | 4.2 (3.9–4.6) | 4.2 (3.9–4.6) | 0.945 | |||||
| HDL, mmol/L, median (IQR) | 1.01 (0.80–1.32) | 1.06 (0.86–1.27) | 1.02 (0.83–1.25) | 1.09 (0.88–1.40) | 1.02 (0.86–1.32) | 0.689 | |||||
| NT‐proBNP, pg/mL, median (IQR) | 1444 (636–3177) | 2345 (1062–4884) | 2689 (1158–5337) | 3533 (1819–6299) | 4503 (2048–9322) | <0.001 | |||||
| Serum creatinine, µg/dL, median (IQR) | 1.00 (0.81–1.19) | 1.14 (0.95–1.40) | 1.13 (0.97–1.44) | 1.22 (1.00–1.56) | 1.40 (1.10–1.83) | <0.001 | |||||
| Troponin‐T, pg/mL, median (IQR) | 21.0 (13.1–37.4) | 28.4 (17.9–49.5) | 30.3 (20.2–50.2) | 34.8 (23.2–56.2) | 43.8 (27.6–72.2) | <0.001 | |||||
ACEi, angiotensin‐converting enzyme inhibitor; AF, atrial fibrillation; ARB, angiotensin receptor blocker; BMI, body mass index; BUN, blood urea nitrogen; COPD, chronic obstructive pulmonary disease; DKK3, Dickkopf‐3; eGFR, estimated glomerular filtration rate; HDL, high‐density lipoprotein; HF, heart failure; IQR, interquartile range; LVEDD, left ventricular end‐diastolic diameter; LVEF, left ventricular ejection fraction; LVESD, left ventricular end‐systolic diameter; NT‐proBNP, N‐terminal prohormone of B‐type natriuretic peptide; NYHA, New York Heart Association; SBP, systolic blood pressure; SD, standard deviation; WT, wall thickness.
P < 0.05 for trend analysis.
Multivariable model of variables associated with DKK3 plasma levels
| Variable | β ± SE | sβ |
|
|---|---|---|---|
| eGFR | −0.137 ± 0.027 | −0.201 | <0.001 |
| NT‐proBNP | 0.041 ± 0.010 | 0.158 | <0.001 |
| Age | 0.004 ± 0.001 | 0.155 | <0.001 |
| Current AF | 0.098 ± 0.024 | 0.149 | <0.001 |
| BMI | −0.142 ± 0.061 | −0.084 | 0.020 |
Multivariable model including DKK3‐associated factors. R 2adj = 0.212. Constructed with forward selection and pairwise exclusion. Variables with P < 0.10 in univariate regression analysis were included in constructing this model. DKK3 plasma levels were log2‐transformed.
AF, atrial fibrillation; β, beta coefficient; BMI, body mass index; eGFR, estimated glomerular filtration rate; NT‐proBNP, N‐terminal prohormone of B‐type natriuretic peptide; Sβ, standardized beta coefficient; SE, standard error.
Log2‐transformed.
P < 0.05.
Cox proportional hazards analysis for prediction of heart failure outcome by doubling of DKK3
| Model | Primary endpoint | All‐cause mortality | Cardiovascular mortality | |||
|---|---|---|---|---|---|---|
| HR (95% CI) |
| HR (95% CI) |
| HR (95% CI) |
| |
| A | 2.42 (1.74–3.38) | <0.001 | 2.78 (2.11–3.67) | <0.001 | 2.76 (1.90–4.00) | <0.001 |
| B | 1.83 (1.29–2.60) | 0.001 | 2.02 (1.50–2.72) | <0.001 | 2.07 (1.39–3.10) | <0.001 |
| C | 1.34 (0.93–1.92) | 0.116 | 1.43 (1.05–1.94) | 0.024 | 1.44 (0.95–1.92) | 0.088 |
| D | NA | NA | 1.24 (0.91–1.70) | 0.172 | NA | NA |
| E | 1.13 (0.79–1.61) | 0.503 | 1.27 (0.94–1.73) | 0.122 | NA | NA |
| F | NA | NA | NA | NA | 1.15 (0.74–1.80) | 0.531 |
Model A = Univariable DKK3. Model B = Model A corrected for age. Model C = Model B corrected for NT‐proBNP. Model D = Model C corrected for BUN. Model E = Model A corrected for previously published HF risk prediction models. For the primary endpoint, this includes age, previous HF hospitalization in the past year, peripheral oedema, SBP, NT‐proBNP, haemoglobin, HDL, sodium and beta‐blocker usage. For all‐cause mortality, this includes age, NT‐proBNP, BUN, haemoglobin and beta‐blocker usage. Model F = Model A corrected for multivariable model as presented in Table .
BUN, blood urea nitrogen; CI, confidence interval; HDL, high‐density lipoprotein; HF, heart failure; HR, hazard ratio; NA, not available; NT‐proBNP, N‐terminal prohormone of B‐type natriuretic peptide; SBP, systolic blood pressure.
P < 0.05.