Literature DB >> 32797340

Complete genome sequence of Buttiauxella phage vB_ButM_GuL6.

Algirdas Noreika1, Rolandas Meškys1, Justas Lazutka2, Laura Kaliniene3.   

Abstract

We present here the results of the analysis of the complete genome sequence of a lytic bacteriophage, vB_ButM_GuL6, which is the first virus isolated from Buttiauxella. Electron microscopy revealed that vB_ButM_GuL6 belongs to the family Myoviridae, order Caudovirales. The genome of vB_ButM_GuL6 is a linear, circularly permuted 178,039-bp dsDNA molecule with a GC content of 43.4%. It has been predicted to contain 282 protein-coding genes and two tRNA genes, tRNA-Met and tRNA-Gly. Using bioinformatics approaches, 99 (36%) of the vB_ButM_GuL6 genes were assigned a putative function. Genome-wide comparisons and phylogenetic analysis indicated that vB_ButM_GuL6 represents a new species of the subfamily Tevenvirinae and is most closely related to Escherichia virus RB43. These phages, together with Cronobacter phages Miller, CfP1, and IME-CF2, likely form a new genus within the subfamily Tevenvirinae.

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Year:  2020        PMID: 32797340     DOI: 10.1007/s00705-020-04780-7

Source DB:  PubMed          Journal:  Arch Virol        ISSN: 0304-8608            Impact factor:   2.574


  5 in total

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Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

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Authors:  Laura Kaliniene; Lidija Truncaitė; Eugenijus Šimoliūnas; Aurelija Zajančkauskaitė; Monika Vilkaitytė; Algirdas Kaupinis; Martynas Skapas; Rolandas Meškys
Journal:  Arch Virol       Date:  2017-10-10       Impact factor: 2.574

Review 3.  The enzymes of the red blood cell plasma membrane.

Authors:  J Delaunay
Journal:  Biomedicine       Date:  1977-12

4.  PHACTS, a computational approach to classifying the lifestyle of phages.

Authors:  Katelyn McNair; Barbara A Bailey; Robert A Edwards
Journal:  Bioinformatics       Date:  2012-01-11       Impact factor: 6.937

5.  The HHpred interactive server for protein homology detection and structure prediction.

Authors:  Johannes Söding; Andreas Biegert; Andrei N Lupas
Journal:  Nucleic Acids Res       Date:  2005-07-01       Impact factor: 16.971

  5 in total

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