Literature DB >> 32797269

Digital Seed Train Twins and Statistical Methods.

Tanja Hernández Rodríguez1, Björn Frahm2.   

Abstract

Model-based concepts and simulation techniques in combination with digital tools emerge as a key to explore the full potential of biopharmaceutical production processes, which contain several challenging development and process steps. One of these steps is the time- and cost-intensive cell proliferation process (also called seed train) to increase cell number from cell thawing up to production scale. Challenges like complex cell metabolism, batch-to-batch variation, variabilities in cell behavior, and influences of changes in cultivation conditions necessitate adequate digital solutions to provide information about the current and near future process state to derive correct process decisions.For this purpose digital seed train twins have proved to be efficient, which digitally display the time-dependent behavior of important process variables based on mathematical models, strategies, and adaption procedures.This chapter will outline the needs for digitalization of seed trains, the construction of a digital seed train twin, the role of parameter estimation, and different statistical methods within this context, which are applicable to several problems in the field of bioprocessing. The results of a case study are presented to illustrate a Bayesian approach for parameter estimation and prediction of an industrial cell culture seed train for seed train digitalization. This chapter outlines the needs for digitalization of cell proliferation processes (seed trains), the construction of a digital seed train twin as well as the role of parameter estimation and different statistical methods within this context, which are applicable to several problems in the field of bioprocessing. The results of a case study are presented to illustrate a Bayesian approach for parameter estimation and prediction of an industrial cell culture seed, as an example for seed train digitalization. It has been shown in which way prior knowledge and input uncertainty can be considered and be propagated to predictive uncertainty.

Keywords:  Bayes; Digital twin; Parameter estimation; Seed train; Uncertainty

Year:  2021        PMID: 32797269     DOI: 10.1007/10_2020_137

Source DB:  PubMed          Journal:  Adv Biochem Eng Biotechnol        ISSN: 0724-6145            Impact factor:   2.635


  21 in total

1.  [Development and application of perfusion culture producing seed cells in WAVE bioreactor].

Authors:  Jianjun Yang; Lili Sui
Journal:  Sheng Wu Gong Cheng Xue Bao       Date:  2012-03

2.  A new seed-train expansion method for recombinant mammalian cell lines.

Authors:  Rüdiger Heidemann; Mokhtar Mered; D Q Wang; Bruce Gardner; Chun Zhang; James Michaels; Hans-Jürgen Henzler; Nada Abbas; Konstantin Konstantinov
Journal:  Cytotechnology       Date:  2002-01       Impact factor: 2.058

3.  Process analytical technology (PAT) for biopharmaceuticals.

Authors:  Jarka Glassey; Krist V Gernaey; Christoph Clemens; Torsten W Schulz; Rui Oliveira; Gerald Striedner; Carl-Fredrik Mandenius
Journal:  Biotechnol J       Date:  2011-03-18       Impact factor: 4.677

4.  Model-based optimization of temperature and pH shift to increase volumetric productivity of a Chinese hamster ovary fed-batch process.

Authors:  Katrin Paul; Vignesh Rajamanickam; Christoph Herwig
Journal:  J Biosci Bioeng       Date:  2019-07-02       Impact factor: 2.894

5.  Process-induced cell cycle oscillations in CHO cultures: Online monitoring and model-based investigation.

Authors:  Johannes Möller; Krathika Bhat; Kristoffer Riecken; Ralf Pörtner; An-Ping Zeng; Uwe Jandt
Journal:  Biotechnol Bioeng       Date:  2019-08-08       Impact factor: 4.530

6.  How can measurement, monitoring, modeling and control advance cell culture in industrial biotechnology?

Authors:  Manuel J T Carrondo; Paula M Alves; Nuno Carinhas; Jarka Glassey; Friedemann Hesse; Otto-Wilhelm Merten; Martina Micheletti; Thomas Noll; Rui Oliveira; Udo Reichl; Arne Staby; Ana P Teixeira; Henry Weichert; Carl-Fredrik Mandenius
Journal:  Biotechnol J       Date:  2012-09-05       Impact factor: 4.677

7.  Multivariate analysis of cell culture bioprocess data--lactate consumption as process indicator.

Authors:  Huong Le; Santosh Kabbur; Luciano Pollastrini; Ziran Sun; Keri Mills; Kevin Johnson; George Karypis; Wei-Shou Hu
Journal:  J Biotechnol       Date:  2012-09-10       Impact factor: 3.307

8.  Model-based identification of cell-cycle-dependent metabolism and putative autocrine effects in antibody producing CHO cell culture.

Authors:  Johannes Möller; Katrin Korte; Ralf Pörtner; An-Ping Zeng; Uwe Jandt
Journal:  Biotechnol Bioeng       Date:  2018-10-23       Impact factor: 4.530

9.  Quantification of the dynamics of population heterogeneities in CHO cultures with stably integrated fluorescent markers.

Authors:  Johannes Möller; Marcel Rosenberg; Kristoffer Riecken; Ralf Pörtner; An-Ping Zeng; Uwe Jandt
Journal:  Anal Bioanal Chem       Date:  2020-03-04       Impact factor: 4.142

10.  Investigation of the interactions of critical scale-up parameters (pH, pO2 and pCO2) on CHO batch performance and critical quality attributes.

Authors:  Matthias Brunner; Jens Fricke; Paul Kroll; Christoph Herwig
Journal:  Bioprocess Biosyst Eng       Date:  2016-10-17       Impact factor: 3.210

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