| Literature DB >> 32796534 |
Carlos G das Neves1, Carlos Sacristán1, Knut Madslien1, Morten Tryland2.
Abstract
Gammaherpesvirus infections have been described in cervids worldwide, mainly the genera Macavirus or Rhadinovirus. However, little is known about the gammaherpesviruses species infecting cervids in Norway and Fennoscandia. Blood samples from semi-domesticated (n = 39) and wild (n = 35) Eurasian tundra reindeer (Rangifer tarandus tarandus), moose (Alces alces, n = 51), and red deer (Cervus elaphus, n = 41) were tested using a panherpesvirus DNA polymerase (DPOL) PCR. DPOL-PCR-positive samples were subsequently tested for the presence of glycoprotein B (gB) gene. The viral DPOL gene was amplified in 28.2% (11/39) of the semi-domesticated reindeer and in 48.6% (17/35) of the wild reindeer. All moose and red deer tested negative. Additionally, gB gene was amplified in 4 of 11 semi-domesticated and 15 of 17 wild Eurasian reindeer DPOL-PCR-positive samples. All the obtained DPOL and gB sequences were highly similar among them, and corresponded to a novel gammaherpesvirus species, tentatively named Rangiferine gammaherpesvirus 1, that seemed to belong to a genus different from Macavirus and Rhadinovirus. This is the first report of a likely host-specific gammaherpesvirus in semi-domesticated reindeer, an economic and cultural important animal, and in wild tundra reindeer, the lastpopulation in Europe. Future studies are required to clarify the potential impact of this gammaherpesvirus on reindeer health.Entities:
Keywords: Fennoscandia; gammaherpesvirus; moose; red deer; reindeer; ungulates; virology; virus discovery; wildlife diseases
Mesh:
Year: 2020 PMID: 32796534 PMCID: PMC7471987 DOI: 10.3390/v12080876
Source DB: PubMed Journal: Viruses ISSN: 1999-4915 Impact factor: 5.048
Results for the gammaherpesvirus PCRs conducted in this study presented by species, and district/municipality of origin (wild cervids) or reindeer-herding district in Finnmark County (semi-domestic reindeer).
| Species | Municipality (for Red Deer and Moose) or Reindeer District | Number of Samples | Gammaherpesvirus PCR | |
|---|---|---|---|---|
| DPOL + | gB + | |||
|
| 7 ZE Rákkonjárga | 3 | 0 | 0 |
| 13ZG Lágesduottar/Ifjordfjellet | 3 | 1 | 0 | |
| 16 ZS Kárašjoga oarjjabealli Karasjok vestre | 10 | 4 | 2 | |
| 27 YK Joahkonjárga | 3 | 0 | 0 | |
| 33YP Spalca | 1 | 1 | 1 | |
| 34 YR Ábborašša | 3 | 1 | 0 | |
| 36 YT Cohkolat ja Biertavárri | 1 | 0 | 0 | |
| 40 YX Orda | 15 | 7 | 1 | |
| subtotal | 39 | 14 | 4 | |
|
| 1 Setesdal Ryfylke | 4 | 2 | 1 |
| 7 Hardangervidda | 13 | 9 | 8 | |
| 11 Nordfjella | 10 | 6 | 6 | |
| 17 Reinheimen-Breheimen | 1 | 0 | 0 | |
| 18 Snøhetta | 1 | 0 | 0 | |
| 19 Rondane sør | 2 | 0 | 0 | |
| 23 Knutshø | 4 | 0 | 0 | |
| subtotal | 35 | 17 | 15 | |
|
| Aurland | 4 | 0 | 0 |
| Hol | 6 | 0 | 0 | |
| Kvinnherad | 11 | 0 | 0 | |
| Lærdal | 16 | 0 | 0 | |
| Ørstad | 4 | 0 | 0 | |
| subtotal | 41 | 0 | 0 | |
|
| Selbu | 24 | 0 | 0 |
| Vega | 27 | 0 | 0 | |
| subtotal | 51 | 0 | 0 | |
|
|
|
|
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Figure 1Location of the moose (Alces alces) and red deer (Cervus elaphus) samples tested in this study and which were all PCR negative. The map depicts Norway’s municipalities.
Figure 2Location of the wild and semi-domesticated Eurasian tundra reindeer (Rangifer tarandus tarandus) samples tested in this study. The map depicts in red/orange wild reindeer management areas, and in dark/light blue semi-domesticated reindeer husbandry districts. Numbers in the areas/districts refer to information from Table 1.
Figure 3MrBayes Bayesian inference phylogenetic tree of a ClustalW alignment of gammaherpesvirus DNA polymerase nucleotide sequences (A) and gammaherpesvirus DNA glycoprotein B sequences (B). ● represents the reindeer sequences obtained in this paper. Dotted grey boxes represent the two gammaherpesvirus genera depicted in this analysis. One should note that the genus Macavirus has been established as a new denomination for a previous type 1 rhadinovirus (malignant catarrhal fever (MCF)-like) group. This explains the presence of some rhadinovirus names in sequences now included in the Macavirus genus. ★ represents sequences of viral species officially classified in its respective genus by the International Commission for Taxonomy of Viruses (ICTV), whereas all other sequences are classified tentatively (from GenBank taxonomy lists). The scale bar indicates the number of nucleotide substitutions per site.
Figure A1The information on the virus phylogenetic trees (A,B) is already presented in Figure 3. In front of each viral sequence, a colored rectangle refers to the taxonomic classification of its host species. These colors are explained on the right-hand side of the figure in an evolutionary cladogram based on species within the Cervidae and Bovidae families. Colored bars indicate the families, subfamilies, and tribes relevant to host species of viral sequences analyzed in this paper. The sequence referring to reindeer is highlighted in a black dashed box. The evolutionary relationships of taxa were inferred using the minimum evolution method [48]. The optimal tree with the sum of branch length = 0.91536236 is shown. The evolutionary distances were computed using the maximum composite likelihood method [49] and are in the units of the number of base substitutions per site. The ME tree was searched using the close-neighbor-interchange (CNI) algorithm at a search level of 1. The analysis involved 14 complete mitochondrion genome sequences (average of 16,000 bp). All positions containing gaps and missing data were eliminated. There was a total of 11,199 positions in the final dataset. Evolutionary analyses were conducted in MEGA7 [32]. For information on the ascension numbers used on the taxa cladogram, please refer to Table A1.
Information on the different species within the Cervidae and Bovidae families used on this analysis and retrieved from GenBank at the National Center for Biotechnology information.
| GenBank | Organism | Common Designation |
|---|---|---|
| NC_020700.1 |
| Fallow deer |
| NC_007704.2 |
| Red deer |
| NC_020684.1 |
| Roe deer |
| NC_020677.1 |
| Moose/elk |
| NC_015247.1 |
| White-tailed deer |
| NC_020729.1 |
| Mule deer |
| NC_007703.1 |
| Reindeer |
| NC_001941.1 |
| Sheep |
| NC_005044.2 |
| Goat |
| NC_020633.1 |
| Chamois |
| NC_020631.1 |
| Muskox |
| NC_020699.1. |
| Blue wildebeest |
| NC_016421.1 |
| Scimitar oryx |
| AF492351.1 |
| Bovine/Cattle |
Relation between PCR and serology results for the semi-domesticated Eurasian tundra reindeer (Rangifer tarandus tarandus) samples included in this study. The serology results refer to a previous survey published in 2013, where 116 out of 3339 (3.5%) apparently healthy semi-domesticated reindeer scored positive for specific antibodies to the malignant catarrhal fever virus (MCFV) group by a direct competitive inhibition enzyme-linked immunosorbent assay [28].
| cELISA | ||||
|---|---|---|---|---|
| POS | NEG | TOTALS | ||
|
| DPOL +/gB + | 4 | 0 | 4 |
| DPOL +/gB − | 7 | 3 | 10 | |
| DPOL −/gB + | 0 | 0 | 0 | |
| DPOL −/gB − | 12 | 13 | 25 | |
| TOTALS | 23 | 16 | 39 | |