Literature DB >> 32794700

Potentially Prebiotic Activation Chemistry Compatible with Nonenzymatic RNA Copying.

Stephanie J Zhang1, Daniel Duzdevich2, Jack W Szostak1,2.   

Abstract

The nonenzymatic replication of ribonucleic acid (RNA) may have enabled the propagation of genetic information during the origin of life. RNA copying can be initiated in the laboratory with chemically activated nucleotides, but continued copying requires a source of chemical energy for in situ nucleotide activation. Recent work has illuminated a potentially prebiotic cyanosulfidic chemistry that activates nucleotides, but its application to nonenzymatic RNA copying had not been demonstrated. Here, we report a novel pathway that activates RNA nucleotides in a manner compatible with template-directed nonenzymatic copying. We show that this pathway, which we refer to as bridge-forming activation, selectively yields the reactive imidazolium-bridged dinucleotide intermediate required for copying. Our results will enable more realistic simulations of RNA propagation based on continuous in situ nucleotide activation.

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Year:  2020        PMID: 32794700     DOI: 10.1021/jacs.0c05300

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   16.383


  7 in total

1.  Competition between bridged dinucleotides and activated mononucleotides determines the error frequency of nonenzymatic RNA primer extension.

Authors:  Daniel Duzdevich; Christopher E Carr; Dian Ding; Stephanie J Zhang; Travis S Walton; Jack W Szostak
Journal:  Nucleic Acids Res       Date:  2021-04-19       Impact factor: 16.971

2.  Nonenzymatic assembly of active chimeric ribozymes from aminoacylated RNA oligonucleotides.

Authors:  Aleksandar Radakovic; Saurja DasGupta; Tom H Wright; Harry R M Aitken; Jack W Szostak
Journal:  Proc Natl Acad Sci U S A       Date:  2022-02-15       Impact factor: 11.205

3.  Freeze-thaw cycles enable a prebiotically plausible and continuous pathway from nucleotide activation to nonenzymatic RNA copying.

Authors:  Stephanie J Zhang; Daniel Duzdevich; Dian Ding; Jack W Szostak
Journal:  Proc Natl Acad Sci U S A       Date:  2022-04-21       Impact factor: 12.779

4.  Template-Free Assembly of Functional RNAs by Loop-Closing Ligation.

Authors:  Long-Fei Wu; Ziwei Liu; Samuel J Roberts; Meng Su; Jack W Szostak; John D Sutherland
Journal:  J Am Chem Soc       Date:  2022-07-26       Impact factor: 16.383

5.  Carbodiimide-Driven Dimerization and Self-Assembly of Artificial, Ribose-Based Amphiphiles.

Authors:  Jing Sun; Julian Vogel; Lisa Chen; A Lennart Schleper; Tim Bergner; Alexander J C Kuehne; Max von Delius
Journal:  Chemistry       Date:  2022-02-08       Impact factor: 5.020

6.  The virtual circular genome model for primordial RNA replication.

Authors:  Lijun Zhou; Dian Ding; Jack W Szostak
Journal:  RNA       Date:  2020-10-07       Impact factor: 4.942

7.  Rolling circle RNA synthesis catalyzed by RNA.

Authors:  Emil Laust Kristoffersen; Matthew Burman; Agnes Noy; Philipp Holliger
Journal:  Elife       Date:  2022-02-02       Impact factor: 8.713

  7 in total

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