Literature DB >> 32794579

Crystal structure of an insect antifreeze protein reveals ordered waters on the ice-binding surface.

Qilu Ye1, Robert Eves1, Robert L Campbell1, Peter L Davies1.   

Abstract

Antifreeze proteins (AFPs) are characterized by their ability to adsorb to the surface of ice crystals and prevent any further crystal growth. AFPs have independently evolved for this purpose in a variety of organisms that encounter the threat of freezing, including many species of polar fish, insects, plants and microorganisms. Despite their diverse origins and structures, it has been suggested that all AFPs can organize ice-like water patterns on one side of the protein (the ice-binding site) that helps bind the AFP to ice. Here, to test this hypothesis, we have solved the crystal structure at 2.05 Å resolution of an AFP from the longhorn beetle, Rhagium mordax with five molecules in the unit cell. This AFP is hyperactive, and its crystal structure resembles that of the R. inquisitor ortholog in having a β-solenoid fold with a wide, flat ice-binding surface formed by four parallel rows of mainly Thr residues. The key difference between these structures is that the R. inquisitor AFP crystallized with its ice-binding site (IBS) making protein-protein contacts that limited the surface water patterns. Whereas the R. mordax AFP crystallized with the IBSs exposed to solvent enabling two layers of unrestricted ordered surface waters to be seen. These crystal waters make close matches to ice lattice waters on the basal and primary prism planes.
© 2020 The Author(s). Published by Portland Press Limited on behalf of the Biochemical Society.

Entities:  

Keywords:  antifreeze protein; crystallography; ice; recombinant proteins; surface waters; β-structure

Mesh:

Substances:

Year:  2020        PMID: 32794579     DOI: 10.1042/BCJ20200539

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  3 in total

Review 1.  Antifreeze Proteins and Their Practical Utilization in Industry, Medicine, and Agriculture.

Authors:  Azadeh Eskandari; Thean Chor Leow; Mohd Basyaruddin Abdul Rahman; Siti Nurbaya Oslan
Journal:  Biomolecules       Date:  2020-12-09

Review 2.  Antifreeze Proteins: A Tale of Evolution From Origin to Energy Applications.

Authors:  Ghazaleh Gharib; Shaghayegh Saeidiharzand; Abdolali K Sadaghiani; Ali Koşar
Journal:  Front Bioeng Biotechnol       Date:  2022-02-03

3.  Water-organizing motif continuity is critical for potent ice nucleation protein activity.

Authors:  Akalabya Bissoyi; Lukas Eickhoff; Naama Reicher; Jordan Forbes; Thomas Hansen; Christopher G Bon; Virginia K Walker; Thomas Koop; Yinon Rudich; Ido Braslavsky; Peter L Davies
Journal:  Nat Commun       Date:  2022-08-26       Impact factor: 17.694

  3 in total

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