Literature DB >> 32793163

Genomic and Phenotypic Analysis of an ESBL-Producing E. coli ST1159 Clonal Lineage From Wild Birds in Mongolia.

Peter Schierack1, Stefan E Heiden2, Muhammad Moman Khan1, Lena Nikolaus2, Rafal Kolenda1, Michael Stubbe3, Davaa Lkhagvasuren4, Stefan Rödiger1,5, Sebastian Guenther2, Katharina Schaufler2.   

Abstract

BACKGROUND: In addition to the broad dissemination of pathogenic extended-spectrum beta-lactamase (ESBL)-producing Escherichia (E.) coli in human and veterinary medicine and the community, their occurrence in wildlife and the environment is a growing concern. Wild birds in particular often carry clinically relevant ESBL-producing E. coli.
OBJECTIVES: We analyzed ESBL-producing and non-ESBL-producing E. coli obtained from wild birds in Mongolia to identify phylogenetic and functional characteristics that would explain the predominance of a particular E. coli clonal lineage in this area.
METHODS: We investigated ESBL-producing E. coli using whole-genome sequencing and phylogenetics to describe the population structure, resistance and virulence features and performed phenotypic experiments like biofilm formation and adhesion to epithelial cells. We compared the phenotypic characteristics to non-ESBL-producing E. coli from the same background (Mongolian wild birds) and genomic results to publicly available genomes. RESULTS AND
CONCLUSION: We found ESBL-producing E. coli sequence type (ST) 1159 among wild birds in Mongolia. This clonal lineage carried virulence features typical for extra-intestinal pathogenic or enterotoxigenic E. coli. Comparative functional experiments suggested no burden of resistance in the ST1159 isolates, which is despite their carriage of ESBL-plasmids. Wild birds will likely disseminate these antibiotic-resistant pathogens further during migration.
Copyright © 2020 Schierack, Heiden, Khan, Nikolaus, Kolenda, Stubbe, Lkhagvasuren, Rödiger, Guenther and Schaufler.

Entities:  

Keywords:  ESBL – E. coli; Mongolia; ST1159; environmental epidemiology; wild birds

Year:  2020        PMID: 32793163      PMCID: PMC7385280          DOI: 10.3389/fmicb.2020.01699

Source DB:  PubMed          Journal:  Front Microbiol        ISSN: 1664-302X            Impact factor:   5.640


  36 in total

Review 1.  A highly versatile microscope imaging technology platform for the multiplex real-time detection of biomolecules and autoimmune antibodies.

Authors:  Stefan Rödiger; Peter Schierack; Alexander Böhm; Jörg Nitschke; Ingo Berger; Ulrike Frömmel; Carsten Schmidt; Mirko Ruhland; Ingolf Schimke; Dirk Roggenbuck; Werner Lehmann; Christian Schröder
Journal:  Adv Biochem Eng Biotechnol       Date:  2013       Impact factor: 2.635

2.  F4+ enterotoxigenic Escherichia coli (ETEC) adhesion mediated by the major fimbrial subunit FaeG.

Authors:  Pengpeng Xia; Yujie Song; Yajie Zou; Ying Yang; Guoqiang Zhu
Journal:  J Basic Microbiol       Date:  2015-04-01       Impact factor: 2.281

3.  Genome sequences and phylogenetic analysis of K88- and F18-positive porcine enterotoxigenic Escherichia coli.

Authors:  Sara M Shepard; Jessica L Danzeisen; Richard E Isaacson; Torsten Seemann; Mark Achtman; Timothy J Johnson
Journal:  J Bacteriol       Date:  2011-11-11       Impact factor: 3.490

4.  genoPlotR: comparative gene and genome visualization in R.

Authors:  Lionel Guy; Jens Roat Kultima; Siv G E Andersson
Journal:  Bioinformatics       Date:  2010-07-11       Impact factor: 6.937

5.  Clade 2.3.2 avian influenza virus (H5N1), Qinghai Lake region, China, 2009-2010.

Authors:  Xudong Hu; Di Liu; Mingyang Wang; Le Yang; Ming Wang; Qingyu Zhu; Laixing Li; George F Gao
Journal:  Emerg Infect Dis       Date:  2011-03       Impact factor: 6.883

6.  Carriage of Extended-Spectrum Beta-Lactamase-Plasmids Does Not Reduce Fitness but Enhances Virulence in Some Strains of Pandemic E. coli Lineages.

Authors:  Katharina Schaufler; Torsten Semmler; Derek J Pickard; María de Toro; Fernando de la Cruz; Lothar H Wieler; Christa Ewers; Sebastian Guenther
Journal:  Front Microbiol       Date:  2016-03-17       Impact factor: 5.640

7.  Fast and accurate short read alignment with Burrows-Wheeler transform.

Authors:  Heng Li; Richard Durbin
Journal:  Bioinformatics       Date:  2009-05-18       Impact factor: 6.937

8.  Comparable high rates of extended-spectrum-beta-lactamase-producing Escherichia coli in birds of prey from Germany and Mongolia.

Authors:  Sebastian Guenther; Katja Aschenbrenner; Ivonne Stamm; Astrid Bethe; Torsten Semmler; Annegret Stubbe; Michael Stubbe; Nyamsuren Batsajkhan; Youri Glupczynski; Lothar H Wieler; Christa Ewers
Journal:  PLoS One       Date:  2012-12-31       Impact factor: 3.240

9.  ESBL-plasmids carrying toxin-antitoxin systems can be "cured" of wild-type Escherichia coli using a heat technique.

Authors:  Katharina Schaufler; Lothar H Wieler; Torsten Semmler; Christa Ewers; Sebastian Guenther
Journal:  Gut Pathog       Date:  2013-11-19       Impact factor: 4.181

10.  Extended-spectrum β-lactamase-encoding genes are spreading on a wide range of Escherichia coli plasmids existing prior to the use of third-generation cephalosporins.

Authors:  Catherine Branger; Alice Ledda; Typhaine Billard-Pomares; Benoît Doublet; Stéphanie Fouteau; Valérie Barbe; David Roche; Stéphane Cruveiller; Claudine Médigue; Miguel Castellanos; Dominique Decré; Laurence Drieux-Rouze; Olivier Clermont; Jérémy Glodt; Olivier Tenaillon; Axel Cloeckaert; Guillaume Arlet; Erick Denamur
Journal:  Microb Genom       Date:  2018-08-06
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  4 in total

1.  Removal of Extended-Spectrum Beta-Lactamase-Producing Escherichia coli, ST98, in Water for Human Consumption by Black Ceramic Water Filters in Low-Income Ecuadorian Highlands.

Authors:  Carlos Bastidas-Caldes; Juan Ochoa; Laura Guerrero-Latorre; Carlos Moyota-Tello; Wilson Tapia; Joaquín María Rey-Pérez; Maria Isabel Baroja
Journal:  Int J Environ Res Public Health       Date:  2022-04-14       Impact factor: 4.614

2.  A Klebsiella pneumoniae ST307 outbreak clone from Germany demonstrates features of extensive drug resistance, hypermucoviscosity, and enhanced iron acquisition.

Authors:  Stefan E Heiden; Nils-Olaf Hübner; Jürgen A Bohnert; Claus-Dieter Heidecke; Axel Kramer; Veronika Balau; Wolfgang Gierer; Stephan Schaefer; Tim Eckmanns; Sören Gatermann; Elias Eger; Sebastian Guenther; Karsten Becker; Katharina Schaufler
Journal:  Genome Med       Date:  2020-12-09       Impact factor: 11.117

3.  Highly Virulent and Multidrug-Resistant Escherichia coli Sequence Type 58 from a Sausage in Germany.

Authors:  Elias Eger; Marielle Domke; Stefan E Heiden; Madeleine Paditz; Veronika Balau; Christiane Huxdorff; Dirk Zimmermann; Timo Homeier-Bachmann; Katharina Schaufler
Journal:  Antibiotics (Basel)       Date:  2022-07-26

4.  Extensively Drug-Resistant Klebsiella pneumoniae Counteracts Fitness and Virulence Costs That Accompanied Ceftazidime-Avibactam Resistance Acquisition.

Authors:  Elias Eger; Michael Schwabe; Lukas Schulig; Nils-Olaf Hübner; Jürgen A Bohnert; Uwe T Bornscheuer; Stefan E Heiden; Justus U Müller; Fazal Adnan; Karsten Becker; Carlos L Correa-Martinez; Sebastian Guenther; Evgeny A Idelevich; Daniel Baecker; Katharina Schaufler
Journal:  Microbiol Spectr       Date:  2022-04-18
  4 in total

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