Literature DB >> 32783965

Selective Modulation of Dynamic Protein Complexes.

Julie M Garlick1, Anna K Mapp2.   

Abstract

Dynamic proteins perform critical roles in cellular machines, including those that control proteostasis, transcription, translation, and signaling. Thus, dynamic proteins are prime candidates for chemical probe and drug discovery but difficult targets because they do not conform to classical rules of design and screening. Selectivity is pivotal for candidate probe molecules due to the extensive interaction network of these dynamic hubs. Recognition that the traditional rules of probe discovery are not necessarily applicable to dynamic proteins and their complexes, as well as technological advances in screening, have produced remarkable results in the last 2-4 years. Particularly notable are the improvements in target selectivity for small-molecule modulators of dynamic proteins, especially with techniques that increase the discovery likelihood of allosteric regulatory mechanisms. We focus on approaches to small-molecule screening that appear to be more suitable for highly dynamic targets and have the potential to streamline identification of selective modulators.
Copyright © 2020 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  drug discovery; dynamic proteins; probe discovery; protein-protein interactions

Mesh:

Substances:

Year:  2020        PMID: 32783965      PMCID: PMC7469457          DOI: 10.1016/j.chembiol.2020.07.019

Source DB:  PubMed          Journal:  Cell Chem Biol        ISSN: 2451-9448            Impact factor:   8.116


  129 in total

Review 1.  Structure, dynamics, assembly, and evolution of protein complexes.

Authors:  Joseph A Marsh; Sarah A Teichmann
Journal:  Annu Rev Biochem       Date:  2014-12-08       Impact factor: 23.643

2.  SimpleDSFviewer: A tool to analyze and view differential scanning fluorimetry data for characterizing protein thermal stability and interactions.

Authors:  Changye Sun; Yong Li; Edwin A Yates; David G Fernig
Journal:  Protein Sci       Date:  2019-08-19       Impact factor: 6.725

3.  Breaking Cryo-EM Resolution Barriers to Facilitate Drug Discovery.

Authors:  Alan Merk; Alberto Bartesaghi; Soojay Banerjee; Veronica Falconieri; Prashant Rao; Mindy I Davis; Rajan Pragani; Matthew B Boxer; Lesley A Earl; Jacqueline L S Milne; Sriram Subramaniam
Journal:  Cell       Date:  2016-05-26       Impact factor: 41.582

4.  Turning a protein kinase on or off from a single allosteric site via disulfide trapping.

Authors:  Jack D Sadowsky; Mark A Burlingame; Dennis W Wolan; Christopher L McClendon; Matthew P Jacobson; James A Wells
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-23       Impact factor: 11.205

5.  14-3-3 protein binding blocks the dimerization interface of caspase-2.

Authors:  Dana Kalabova; Frantisek Filandr; Miroslava Alblova; Olivia Petrvalska; Matej Horvath; Petr Man; Tomas Obsil; Veronika Obsilova
Journal:  FEBS J       Date:  2020-02-04       Impact factor: 5.542

6.  Ligand-Based Fluorine NMR Screening: Principles and Applications in Drug Discovery Projects.

Authors:  Claudio Dalvit; Anna Vulpetti
Journal:  J Med Chem       Date:  2018-10-29       Impact factor: 7.446

Review 7.  Malleable machines take shape in eukaryotic transcriptional regulation.

Authors:  Monika Fuxreiter; Peter Tompa; István Simon; Vladimir N Uversky; Jeffrey C Hansen; Francisco J Asturias
Journal:  Nat Chem Biol       Date:  2008-12       Impact factor: 15.040

Review 8.  Studies on Molecular Dynamics of Intrinsically Disordered Proteins and Their Fuzzy Complexes: A Mini-Review.

Authors:  Kota Kasahara; Hiroki Terazawa; Takuya Takahashi; Junichi Higo
Journal:  Comput Struct Biotechnol J       Date:  2019-06-13       Impact factor: 7.271

Review 9.  Concepts and Core Principles of Fragment-Based Drug Design.

Authors:  Philine Kirsch; Alwin M Hartman; Anna K H Hirsch; Martin Empting
Journal:  Molecules       Date:  2019-11-26       Impact factor: 4.411

10.  The Selectivity of Fosfosal for STAT5b over STAT5a is Mediated by Arg566 in the Linker Domain.

Authors:  Julian Gräb; Thorsten Berg
Journal:  Chembiochem       Date:  2020-05-08       Impact factor: 3.164

View more
  3 in total

1.  Drugging Fuzzy Complexes in Transcription.

Authors:  Bonnie G Su; Matthew J Henley
Journal:  Front Mol Biosci       Date:  2021-12-21

2.  Norstictic Acid Is a Selective Allosteric Transcriptional Regulator.

Authors:  Julie M Garlick; Steven M Sturlis; Paul A Bruno; Joel A Yates; Amanda L Peiffer; Yejun Liu; Laura Goo; LiWei Bao; Samantha N De Salle; Giselle Tamayo-Castillo; Charles L Brooks; Sofia D Merajver; Anna K Mapp
Journal:  J Am Chem Soc       Date:  2021-06-17       Impact factor: 15.419

Review 3.  Unifying Catalysis Framework to Dissect Proteasomal Degradation Paradigms.

Authors:  Frances P Rodriguez-Rivera; Samuel M Levi
Journal:  ACS Cent Sci       Date:  2021-06-16       Impact factor: 14.553

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.