Literature DB >> 32778826

A multidimensional precision medicine approach identifies an autism subtype characterized by dyslipidemia.

Yuan Luo1,2,3,4, Alal Eran5,6,7, Nathan Palmer6, Paul Avillach6, Ami Levy-Moonshine8, Peter Szolovits9, Isaac S Kohane10.   

Abstract

The promise of precision medicine lies in data diversity. More than the sheer size of biomedical data, it is the layering of multiple data modalities, offering complementary perspectives, that is thought to enable the identification of patient subgroups with shared pathophysiology. In the present study, we use autism to test this notion. By combining healthcare claims, electronic health records, familial whole-exome sequences and neurodevelopmental gene expression patterns, we identified a subgroup of patients with dyslipidemia-associated autism.

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Year:  2020        PMID: 32778826     DOI: 10.1038/s41591-020-1007-0

Source DB:  PubMed          Journal:  Nat Med        ISSN: 1078-8956            Impact factor:   53.440


  37 in total

1.  Improved survival with vemurafenib in melanoma with BRAF V600E mutation.

Authors:  Paul B Chapman; Axel Hauschild; Caroline Robert; John B Haanen; Paolo Ascierto; James Larkin; Reinhard Dummer; Claus Garbe; Alessandro Testori; Michele Maio; David Hogg; Paul Lorigan; Celeste Lebbe; Thomas Jouary; Dirk Schadendorf; Antoni Ribas; Steven J O'Day; Jeffrey A Sosman; John M Kirkwood; Alexander M M Eggermont; Brigitte Dreno; Keith Nolop; Jiang Li; Betty Nelson; Jeannie Hou; Richard J Lee; Keith T Flaherty; Grant A McArthur
Journal:  N Engl J Med       Date:  2011-06-05       Impact factor: 91.245

Review 2.  Advancing the understanding of autism disease mechanisms through genetics.

Authors:  Luis de la Torre-Ubieta; Hyejung Won; Jason L Stein; Daniel H Geschwind
Journal:  Nat Med       Date:  2016-04       Impact factor: 53.440

3.  Predictive correlates of response to the anti-PD-L1 antibody MPDL3280A in cancer patients.

Authors:  Roy S Herbst; Jean-Charles Soria; Marcin Kowanetz; Gregg D Fine; Omid Hamid; Michael S Gordon; Jeffery A Sosman; David F McDermott; John D Powderly; Scott N Gettinger; Holbrook E K Kohrt; Leora Horn; Donald P Lawrence; Sandra Rost; Maya Leabman; Yuanyuan Xiao; Ahmad Mokatrin; Hartmut Koeppen; Priti S Hegde; Ira Mellman; Daniel S Chen; F Stephen Hodi
Journal:  Nature       Date:  2014-11-27       Impact factor: 49.962

4.  Integrative functional genomic analyses implicate specific molecular pathways and circuits in autism.

Authors:  Neelroop N Parikshak; Rui Luo; Alice Zhang; Hyejung Won; Jennifer K Lowe; Vijayendran Chandran; Steve Horvath; Daniel H Geschwind
Journal:  Cell       Date:  2013-11-21       Impact factor: 41.582

5.  An integrated genomic analysis of human glioblastoma multiforme.

Authors:  D Williams Parsons; Siân Jones; Xiaosong Zhang; Jimmy Cheng-Ho Lin; Rebecca J Leary; Philipp Angenendt; Parminder Mankoo; Hannah Carter; I-Mei Siu; Gary L Gallia; Alessandro Olivi; Roger McLendon; B Ahmed Rasheed; Stephen Keir; Tatiana Nikolskaya; Yuri Nikolsky; Dana A Busam; Hanna Tekleab; Luis A Diaz; James Hartigan; Doug R Smith; Robert L Strausberg; Suely Kazue Nagahashi Marie; Sueli Mieko Oba Shinjo; Hai Yan; Gregory J Riggins; Darell D Bigner; Rachel Karchin; Nick Papadopoulos; Giovanni Parmigiani; Bert Vogelstein; Victor E Velculescu; Kenneth W Kinzler
Journal:  Science       Date:  2008-09-04       Impact factor: 47.728

6.  Integrated systems analysis reveals a molecular network underlying autism spectrum disorders.

Authors:  Jingjing Li; Minyi Shi; Zhihai Ma; Shuchun Zhao; Ghia Euskirchen; Jennifer Ziskin; Alexander Urban; Joachim Hallmayer; Michael Snyder
Journal:  Mol Syst Biol       Date:  2014-12-30       Impact factor: 11.429

7.  Gene expression in human brain implicates sexually dimorphic pathways in autism spectrum disorders.

Authors:  Donna M Werling; Neelroop N Parikshak; Daniel H Geschwind
Journal:  Nat Commun       Date:  2016-02-19       Impact factor: 14.919

8.  Sex Biased Gene Expression Profiling of Human Brains at Major Developmental Stages.

Authors:  Lei Shi; Zhe Zhang; Bing Su
Journal:  Sci Rep       Date:  2016-02-16       Impact factor: 4.379

9.  Prevalence of Autism Spectrum Disorder Among Children Aged 8 Years - Autism and Developmental Disabilities Monitoring Network, 11 Sites, United States, 2016.

Authors:  Matthew J Maenner; Kelly A Shaw; Jon Baio; Anita Washington; Mary Patrick; Monica DiRienzo; Deborah L Christensen; Lisa D Wiggins; Sydney Pettygrove; Jennifer G Andrews; Maya Lopez; Allison Hudson; Thaer Baroud; Yvette Schwenk; Tiffany White; Cordelia Robinson Rosenberg; Li-Ching Lee; Rebecca A Harrington; Margaret Huston; Amy Hewitt; Amy Esler; Jennifer Hall-Lande; Jenny N Poynter; Libby Hallas-Muchow; John N Constantino; Robert T Fitzgerald; Walter Zahorodny; Josephine Shenouda; Julie L Daniels; Zachary Warren; Alison Vehorn; Angelica Salinas; Maureen S Durkin; Patricia M Dietz
Journal:  MMWR Surveill Summ       Date:  2020-03-27

Review 10.  Autism spectrum disorder.

Authors:  Catherine Lord; Traolach S Brugha; Tony Charman; James Cusack; Guillaume Dumas; Thomas Frazier; Emily J H Jones; Rebecca M Jones; Andrew Pickles; Matthew W State; Julie Lounds Taylor; Jeremy Veenstra-VanderWeele
Journal:  Nat Rev Dis Primers       Date:  2020-01-16       Impact factor: 52.329

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  11 in total

1.  A comprehensive SARS-CoV-2-human protein-protein interactome reveals COVID-19 pathobiology and potential host therapeutic targets.

Authors:  Yadi Zhou; Yuan Liu; Shagun Gupta; Mauricio I Paramo; Yuan Hou; Chengsheng Mao; Yuan Luo; Julius Judd; Shayne Wierbowski; Marta Bertolotti; Mriganka Nerkar; Lara Jehi; Nir Drayman; Vlad Nicolaescu; Haley Gula; Savaş Tay; Glenn Randall; Peihui Wang; John T Lis; Cédric Feschotte; Serpil C Erzurum; Feixiong Cheng; Haiyuan Yu
Journal:  Nat Biotechnol       Date:  2022-10-10       Impact factor: 68.164

2.  C1q/TNF-related protein-1: Potential biomarker for early diagnosis of autism spectrum disorder.

Authors:  Hamed Raeisy; Paria Bayati; Farshid Noorbakhsh; Mitra Hakim Shooshtari; Mehrdad Eftekhar Ardebili; Mehdi Shekarabi; Nazanin Mojtabavi
Journal:  Int J Immunopathol Pharmacol       Date:  2022 Jan-Dec       Impact factor: 3.219

3.  A comprehensive SARS-CoV-2-human protein-protein interactome network identifies pathobiology and host-targeting therapies for COVID-19.

Authors:  Yadi Zhou; Yuan Liu; Shagun Gupta; Mauricio I Paramo; Yuan Hou; Chengsheng Mao; Yuan Luo; Julius Judd; Shayne Wierbowski; Marta Bertolotti; Mriganka Nerkar; Lara Jehi; Nir Drayman; Vlad Nicolaescu; Haley Gula; Savaş Tay; Glenn Randall; John T Lis; Cédric Feschotte; Serpil C Erzurum; Feixiong Cheng; Haiyuan Yu
Journal:  Res Sq       Date:  2022-06-07

4.  Risk factors in autism spectrum disorder: A Tunisian case-control study.

Authors:  Senda Slama; Wael Bahia; Ismael Soltani; Naoufel Gaddour; Salima Ferchichi
Journal:  Saudi J Biol Sci       Date:  2022-01-04       Impact factor: 4.052

5.  Identifying Subgroups of Patients With Autism by Gene Expression Profiles Using Machine Learning Algorithms.

Authors:  Ping-I Lin; Mohammad Ali Moni; Susan Shur-Fen Gau; Valsamma Eapen
Journal:  Front Psychiatry       Date:  2021-05-12       Impact factor: 4.157

6.  Diagnostic shifts in autism spectrum disorder can be linked to the fuzzy nature of the diagnostic boundary: a data-driven approach.

Authors:  Birkan Tunç; Juhi Pandey; Tanya St John; Shoba S Meera; Jennifer E Maldarelli; Lonnie Zwaigenbaum; Heather C Hazlett; Stephen R Dager; Kelly N Botteron; Jessica B Girault; Robert C McKinstry; Ragini Verma; Jed T Elison; John R Pruett; Joseph Piven; Annette M Estes; Robert T Schultz
Journal:  J Child Psychol Psychiatry       Date:  2021-04-07       Impact factor: 8.265

Review 7.  Paving the Way toward Personalized Medicine: Current Advances and Challenges in Multi-OMICS Approach in Autism Spectrum Disorder for Biomarkers Discovery and Patient Stratification.

Authors:  Areej G Mesleh; Sara A Abdulla; Omar El-Agnaf
Journal:  J Pers Med       Date:  2021-01-13

8.  Factors associated with age of diagnosis of autism spectrum disorder among children in Saudi Arabia: new insights from a cross-sectional study.

Authors:  Fahad M Alnemary; Faisal M Alnemary; Gabriela Simon-Cereijido; Hesham M Aldhalaan; Anthony Hernandez; Ahmed Alyahya; Shuliweeh Alenezi
Journal:  BMC Res Notes       Date:  2022-05-10

9.  CTRP3 as a novel biomarker in the plasma of Saudi children with autism.

Authors:  Manan Alhakbany; Afaf El-Ansary; Laila Al-Ayadhi
Journal:  PeerJ       Date:  2022-01-11       Impact factor: 2.984

Review 10.  Unveiling the Pathogenesis of Psychiatric Disorders Using Network Models.

Authors:  Yanning Zuo; Don Wei; Carissa Zhu; Ormina Naveed; Weizhe Hong; Xia Yang
Journal:  Genes (Basel)       Date:  2021-07-20       Impact factor: 4.096

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