Literature DB >> 32775691

Privacy and ethical challenges in next-generation sequencing.

Nicole Martinez-Martin1, David Magnus1.   

Abstract

INTRODUCTION: Next-generation sequencing (NGS) is expected to revolutionize health care. NGS allows for sequencing of the whole genome more cheaply and quickly than previous techniques. NGS offers opportunities to advance medical diagnostics and treatments, but also raises complicated ethical questions that need to be addressed. AREAS CONSIDERED: This article draws from the literature on research and clinical ethics, as well as next-generation sequencing, in order to provide an overview of the ethical challenges involved in next-generation sequencing. This article includes a discussion of the ethics of NGS in research and clinical contexts. EXPERT OPINION: The use of NGS in clinical and research contexts has features that pose challenges for traditional ethical frameworks for protecting research participants and patients. NGS generates massive amounts of data and results that vary in terms of known clinical relevance. It is important to determine appropriate processes for protecting, managing and communicating the data. The use of machine learning for sequencing and interpretation of genomic data also raises concerns in terms of the potential for bias and potential implications for fiduciary obligations. NGS poses particular challenges in three main ethical areas: privacy, informed consent, and return of results.

Entities:  

Keywords:  Next generation sequencing; ethics; privacy

Year:  2019        PMID: 32775691      PMCID: PMC7413244          DOI: 10.1080/23808993.2019.1599685

Source DB:  PubMed          Journal:  Expert Rev Precis Med Drug Dev        ISSN: 2380-8993


  74 in total

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Journal:  J Leg Med       Date:  2007 Oct-Dec

Review 2.  Why Deep Learning Is Changing the Way to Approach NGS Data Processing: A Review.

Authors:  Fabrizio Celesti; Antonio Celesti; Jiafu Wan; Massimo Villari
Journal:  IEEE Rev Biomed Eng       Date:  2018-04-12

Review 3.  Machine learning applications in genetics and genomics.

Authors:  Maxwell W Libbrecht; William Stafford Noble
Journal:  Nat Rev Genet       Date:  2015-05-07       Impact factor: 53.242

4.  You never call, you never write: why return of 'omic' results to research participants is both a good idea and a moral imperative.

Authors:  Misha Angrist
Journal:  Per Med       Date:  2011-11       Impact factor: 2.512

5.  Clinical genomics, big data, and electronic medical records: reconciling patient rights with research when privacy and science collide.

Authors:  Jennifer Kulynych; Henry T Greely
Journal:  J Law Biosci       Date:  2017-01-15

6.  American Society of Clinical Oncology policy statement update: genetic testing for cancer susceptibility.

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Journal:  J Clin Oncol       Date:  2003-04-11       Impact factor: 44.544

Review 7.  Clinical applications of next generation sequencing in cancer: from panels, to exomes, to genomes.

Authors:  Tony Shen; Stefan Hans Pajaro-Van de Stadt; Nai Chien Yeat; Jimmy C-H Lin
Journal:  Front Genet       Date:  2015-06-17       Impact factor: 4.599

8.  ACMG recommendations for reporting of incidental findings in clinical exome and genome sequencing.

Authors:  Robert C Green; Jonathan S Berg; Wayne W Grody; Sarah S Kalia; Bruce R Korf; Christa L Martin; Amy L McGuire; Robert L Nussbaum; Julianne M O'Daniel; Kelly E Ormond; Heidi L Rehm; Michael S Watson; Marc S Williams; Leslie G Biesecker
Journal:  Genet Med       Date:  2013-06-20       Impact factor: 8.822

Review 9.  Integration of next-generation sequencing in clinical diagnostic molecular pathology laboratories for analysis of solid tumours; an expert opinion on behalf of IQN Path ASBL.

Authors:  Zandra C Deans; Jose Luis Costa; Ian Cree; Els Dequeker; Anders Edsjö; Shirley Henderson; Michael Hummel; Marjolijn Jl Ligtenberg; Marco Loddo; Jose Carlos Machado; Antonio Marchetti; Katherine Marquis; Joanne Mason; Nicola Normanno; Etienne Rouleau; Ed Schuuring; Keeda-Marie Snelson; Erik Thunnissen; Bastiaan Tops; Gareth Williams; Han van Krieken; Jacqueline A Hall
Journal:  Virchows Arch       Date:  2016-09-27       Impact factor: 4.064

10.  Next-generation sequencing approach for the diagnosis of human diseases: open challenges and new opportunities.

Authors:  Chiara Di Resta; Silvia Galbiati; Paola Carrera; Maurizio Ferrari
Journal:  EJIFCC       Date:  2018-04-30
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  6 in total

1.  Australian human research ethics committee members' confidence in reviewing genomic research applications.

Authors:  Ryan Pysar; Courtney K Wallingford; Jackie Boyle; Scott B Campbell; Lisa Eckstein; Rebekah McWhirter; Bronwyn Terrill; Chris Jacobs; Aideen M McInerney-Leo
Journal:  Eur J Hum Genet       Date:  2021-08-26       Impact factor: 4.246

Review 2.  Artificial Intelligence in Medical Imaging and its Impact on the Rare Disease Community: Threats, Challenges and Opportunities.

Authors:  Navid Hasani; Faraz Farhadi; Michael A Morris; Moozhan Nikpanah; Arman Rhamim; Yanji Xu; Anne Pariser; Michael T Collins; Ronald M Summers; Elizabeth Jones; Eliot Siegel; Babak Saboury
Journal:  PET Clin       Date:  2022-01

Review 3.  Molecular Profiling of Malignant Pleural Effusions with Next Generation Sequencing (NGS): Evidence that Supports Its Role in Cancer Management.

Authors:  Georgia Ι Grigoriadou; Stepan M Esagian; Han Suk Ryu; Ilias P Nikas
Journal:  J Pers Med       Date:  2020-11-01

Review 4.  Opportunities and challenges for the computational interpretation of rare variation in clinically important genes.

Authors:  Gregory McInnes; Andrew G Sharo; Megan L Koleske; Julia E H Brown; Matthew Norstad; Aashish N Adhikari; Sheng Wang; Steven E Brenner; Jodi Halpern; Barbara A Koenig; David C Magnus; Renata C Gallagher; Kathleen M Giacomini; Russ B Altman
Journal:  Am J Hum Genet       Date:  2021-04-01       Impact factor: 11.025

Review 5.  Genetic Disorders with Predisposition to Paediatric Haematopoietic Malignancies-A Review.

Authors:  Aleksandra Filipiuk; Agata Kozakiewicz; Kamil Kośmider; Monika Lejman; Joanna Zawitkowska
Journal:  Cancers (Basel)       Date:  2022-07-22       Impact factor: 6.575

Review 6.  Ethical challenges of cord blood banks: a scoping review.

Authors:  Madjid Soltani Gerdfaramarzi; Shabnam Bazmi; Mehrzad Kiani; Leila Afshar; Mohsen Fadavi; Seyed Ali Enjoo
Journal:  J Med Life       Date:  2022-06
  6 in total

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