Literature DB >> 32761370

[Genetic diagnostics of autoinflammatory diseases].

Oskar Schnappauf1.   

Abstract

Autoinflammatory syndromes are characterized by periodic febrile attacks in combination with increased inflammatory markers. The dysregulation of different cellular signaling pathways leads to an excessive immune response, which can in turn promote multisystemic inflammatory processes. Due to overlapping symptoms, variable expressivity and pleiotropy, a purely clinical diagnosis of autoinflammatory diseases is difficult in many cases. Because an early and definitive diagnosis can greatly improve the quality of life of many patients, molecular genetic methods have become an important part of the diagnostic process. With the development of next-generation sequencing (NGS), the genetic diagnosis of patients with autoinflammatory diseases has significantly improved. Considerable progress has not only been made in the genetic characterization of undiagnosed patients, but additionally in identifying numerous new disease-associated genes; however, the plethora of molecular genetic analytical methods makes it difficult to select the method with the highest diagnostic specificity and sensitivity. The NGS technologies have also led to a large increase in the number of identified variants, making the clinical evaluation of these variants more complex. Consensus-driven and standardized molecular diagnostic guidelines, both for the diagnostic process and for the interpretation of the obtained results, have therefore become essential.

Entities:  

Keywords:  Molecular genetic analysis; Next-generation sequencing; Periodic febrile attacks; Targeted gene panels; Variant classification

Mesh:

Substances:

Year:  2020        PMID: 32761370      PMCID: PMC7484157          DOI: 10.1007/s00393-020-00847-7

Source DB:  PubMed          Journal:  Z Rheumatol        ISSN: 0340-1855            Impact factor:   1.372


  26 in total

1.  Performance of ACMG-AMP Variant-Interpretation Guidelines among Nine Laboratories in the Clinical Sequencing Exploratory Research Consortium.

Authors:  Laura M Amendola; Gail P Jarvik; Michael C Leo; Heather M McLaughlin; Yassmine Akkari; Michelle D Amaral; Jonathan S Berg; Sawona Biswas; Kevin M Bowling; Laura K Conlin; Greg M Cooper; Michael O Dorschner; Matthew C Dulik; Arezou A Ghazani; Rajarshi Ghosh; Robert C Green; Ragan Hart; Carrie Horton; Jennifer J Johnston; Matthew S Lebo; Aleksandar Milosavljevic; Jeffrey Ou; Christine M Pak; Ronak Y Patel; Sumit Punj; Carolyn Sue Richards; Joseph Salama; Natasha T Strande; Yaping Yang; Sharon E Plon; Leslie G Biesecker; Heidi L Rehm
Journal:  Am J Hum Genet       Date:  2016-05-12       Impact factor: 11.025

2.  Whole exome sequencing in unclassified autoinflammatory diseases: more monogenic diseases in the pipeline?

Authors:  Can Kosukcu; Ekim Z Taskiran; Ezgi Deniz Batu; Erdal Sag; Yelda Bilginer; Mehmet Alikasifoglu; Seza Ozen
Journal:  Rheumatology (Oxford)       Date:  2021-02-01       Impact factor: 7.580

3.  New workflow for classification of genetic variants' pathogenicity applied to hereditary recurrent fevers by the International Study Group for Systemic Autoinflammatory Diseases (INSAID).

Authors:  Marielle E Van Gijn; Isabella Ceccherini; Yael Shinar; Ellen C Carbo; Mariska Slofstra; Juan I Arostegui; Guillaume Sarrabay; Dorota Rowczenio; Ebun Omoyımnı; Banu Balci-Peynircioglu; Hal M Hoffman; Florian Milhavet; Morris A Swertz; Isabelle Touitou
Journal:  J Med Genet       Date:  2018-03-29       Impact factor: 6.318

4.  Brief Report: Association of Tumor Necrosis Factor Receptor-Associated Periodic Syndrome With Gonosomal Mosaicism of a Novel 24-Nucleotide TNFRSF1A Deletion.

Authors:  Dorota M Rowczenio; Hadija Trojer; Ebun Omoyinmi; Juan I Aróstegui; Grigor Arakelov; Anna Mensa-Vilaro; Anna Baginska; Caroline Silva Pilorz; Guosu Wang; Thirusha Lane; Paul Brogan; Philip N Hawkins; Helen J Lachmann
Journal:  Arthritis Rheumatol       Date:  2016-08       Impact factor: 10.995

5.  Exome sequencing has higher diagnostic yield compared to simulated disease-specific panels in children with suspected monogenic disorders.

Authors:  Oliver James Dillon; Sebastian Lunke; Zornitza Stark; Alison Yeung; Natalie Thorne; Clara Gaff; Susan M White; Tiong Yang Tan
Journal:  Eur J Hum Genet       Date:  2018-02-16       Impact factor: 4.246

6.  A novel Pyrin-Associated Autoinflammation with Neutrophilic Dermatosis mutation further defines 14-3-3 binding of pyrin and distinction to Familial Mediterranean Fever.

Authors:  Fiona Moghaddas; Rafael Llamas; Dominic De Nardo; Helios Martinez-Banaclocha; Juan J Martinez-Garcia; Pablo Mesa-Del-Castillo; Paul J Baker; Vanessa Gargallo; Anna Mensa-Vilaro; Scott Canna; Ian P Wicks; Pablo Pelegrin; Juan I Arostegui; Seth L Masters
Journal:  Ann Rheum Dis       Date:  2017-08-23       Impact factor: 19.103

7.  DNA polymerase-α regulates the activation of type I interferons through cytosolic RNA:DNA synthesis.

Authors:  Petro Starokadomskyy; Terry Gemelli; Jonathan J Rios; Chao Xing; Richard C Wang; Haiying Li; Vladislav Pokatayev; Igor Dozmorov; Shaheen Khan; Naoteru Miyata; Guadalupe Fraile; Prithvi Raj; Zhe Xu; Zigang Xu; Lin Ma; Zhimiao Lin; Huijun Wang; Yong Yang; Dan Ben-Amitai; Naama Orenstein; Huda Mussaffi; Eulalia Baselga; Gianluca Tadini; Eyal Grunebaum; Adrijan Sarajlija; Konrad Krzewski; Edward K Wakeland; Nan Yan; Maria Teresa de la Morena; Andrew R Zinn; Ezra Burstein
Journal:  Nat Immunol       Date:  2016-03-28       Impact factor: 25.606

8.  Evaluation of in silico algorithms for use with ACMG/AMP clinical variant interpretation guidelines.

Authors:  Rajarshi Ghosh; Ninad Oak; Sharon E Plon
Journal:  Genome Biol       Date:  2017-11-28       Impact factor: 13.583

9.  Clinical impact of a targeted next-generation sequencing gene panel for autoinflammation and vasculitis.

Authors:  Ebun Omoyinmi; Ariane Standing; Annette Keylock; Fiona Price-Kuehne; Sonia Melo Gomes; Dorota Rowczenio; Sira Nanthapisal; Thomas Cullup; Rodney Nyanhete; Emma Ashton; Claire Murphy; Megan Clarke; Helena Ahlfors; Lucy Jenkins; Kimberly Gilmour; Despina Eleftheriou; Helen J Lachmann; Philip N Hawkins; Nigel Klein; Paul A Brogan
Journal:  PLoS One       Date:  2017-07-27       Impact factor: 3.240

10.  Mutations that prevent caspase cleavage of RIPK1 cause autoinflammatory disease.

Authors:  Najoua Lalaoui; Steven E Boyden; Hirotsugu Oda; Geryl M Wood; Deborah L Stone; Diep Chau; Lin Liu; Monique Stoffels; Tobias Kratina; Kate E Lawlor; Kristien J M Zaal; Patrycja M Hoffmann; Nima Etemadi; Kristy Shield-Artin; Christine Biben; Wanxia Li Tsai; Mary D Blake; Hye Sun Kuehn; Dan Yang; Holly Anderton; Natasha Silke; Laurens Wachsmuth; Lixin Zheng; Natalia Sampaio Moura; David B Beck; Gustavo Gutierrez-Cruz; Amanda K Ombrello; Gineth P Pinto-Patarroyo; Andrew J Kueh; Marco J Herold; Cathrine Hall; Hongying Wang; Jae Jin Chae; Natalia I Dmitrieva; Mark McKenzie; Amanda Light; Beverly K Barham; Anne Jones; Tina M Romeo; Qing Zhou; Ivona Aksentijevich; James C Mullikin; Andrew J Gross; Anthony K Shum; Edwin D Hawkins; Seth L Masters; Michael J Lenardo; Manfred Boehm; Sergio D Rosenzweig; Manolis Pasparakis; Anne K Voss; Massimo Gadina; Daniel L Kastner; John Silke
Journal:  Nature       Date:  2019-12-11       Impact factor: 49.962

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