Literature DB >> 32759316

An Optimized Reverse Genetics System Suitable for Efficient Recovery of Simian, Human, and Murine-Like Rotaviruses.

Liliana Sánchez-Tacuba1,2,3, Ningguo Feng1,2,3, Nathan J Meade4,5, Kenneth H Mellits5, Philippe H Jaïs6, Linda L Yasukawa1,2,3, Theresa K Resch7, Baoming Jiang8, Susana López9, Siyuan Ding10, Harry B Greenberg11,2,3.   

Abstract

An entirely plasmid-based reverse genetics (RG) system was recently developed for rotavirus (RV), opening new avenues for in-depth molecular dissection of RV biology, immunology, and pathogenesis. Several improvements to further optimize the RG efficiency have now been described. However, only a small number of individual RV strains have been recovered to date. None of the current methods have supported the recovery of murine RV, impeding the study of RV replication and pathogenesis in an in vivo suckling mouse model. Here, we describe useful modifications to the RG system that significantly improve rescue efficiency of multiple RV strains. In addition to the 11 group A RV segment-specific (+)RNAs [(+)ssRNAs], a chimeric plasmid was transfected, from which the capping enzyme NP868R of African swine fever virus (ASFV) and the T7 RNA polymerase were expressed. Second, a genetically modified MA104 cell line was used in which several components of the innate immunity were degraded. Using this RG system, we successfully recovered the simian RV RRV strain, the human RV CDC-9 strain, a reassortant between murine RV D6/2 and simian RV SA11 strains, and several reassortants and reporter RVs. All these recombinant RVs were rescued at a high efficiency (≥80% success rate) and could not be reliably rescued using several recently published RG strategies (<20%). This improved system represents an important tool and great potential for the rescue of other hard-to-recover RV strains such as low-replicating attenuated vaccine candidates or low-cell culture passage clinical isolates from humans or animals.IMPORTANCE Group A rotavirus (RV) remains as the single most important cause of severe acute gastroenteritis among infants and young children worldwide. An entirely plasmid-based reverse genetics (RG) system was recently developed, opening new ways for in-depth molecular study of RV. Despite several improvements to further optimize the RG efficiency, it has been reported that current strategies do not enable the rescue of all cultivatable RV strains. Here, we described a helpful modification to the current strategies and established a tractable RG system for the rescue of the simian RRV strain, the human CDC-9 strain, and a murine-like RV strain, which is suitable for both in vitro and in vivo studies. This improved RV reverse genetics system will facilitate study of RV biology in both in vitro and in vivo systems that will facilitate the improved design of RV vaccines, better antiviral therapies, and expression vectors.
Copyright © 2020 American Society for Microbiology.

Entities:  

Keywords:  interferons; reverse genetics; rotavirus

Mesh:

Substances:

Year:  2020        PMID: 32759316      PMCID: PMC7459567          DOI: 10.1128/JVI.01294-20

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  53 in total

1.  Molecular characterization of human rotavirus vaccine strain CDC-9 during sequential passages in Vero cells.

Authors:  Mathew D Esona; Kimberly Foytich; Yuhuan Wang; Gary Shin; Gang Wei; Jon R Gentsch; Roger I Glass; Baoming Jiang
Journal:  Hum Vaccin       Date:  2010-03-23

2.  Generation of Recombinant Rotaviruses Expressing Fluorescent Proteins by Using an Optimized Reverse Genetics System.

Authors:  Satoshi Komoto; Saori Fukuda; Tomihiko Ide; Naoto Ito; Makoto Sugiyama; Tetsushi Yoshikawa; Takayuki Murata; Koki Taniguchi
Journal:  J Virol       Date:  2018-06-13       Impact factor: 5.103

3.  Reverse Genetics System for a Human Group A Rotavirus.

Authors:  Takahiro Kawagishi; Jeffery A Nurdin; Misa Onishi; Ryotaro Nouda; Yuta Kanai; Takeshi Tajima; Hiroshi Ushijima; Takeshi Kobayashi
Journal:  J Virol       Date:  2020-01-06       Impact factor: 5.103

4.  Simian rotavirus SA11 replication in cell cultures.

Authors:  M K Estes; D Y Graham; C P Gerba; E M Smith
Journal:  J Virol       Date:  1979-09       Impact factor: 5.103

5.  A Rotavirus-Induced Mouse Model to Study Biliary Atresia and Neonatal Cholestasis.

Authors:  Sujit K Mohanty; Bryan Donnelly; Haley Temple; Gregory M Tiao
Journal:  Methods Mol Biol       Date:  2019

6.  Role of interferon in homologous and heterologous rotavirus infection in the intestines and extraintestinal organs of suckling mice.

Authors:  N Feng; B Kim; M Fenaux; H Nguyen; P Vo; M B Omary; H B Greenberg
Journal:  J Virol       Date:  2008-05-21       Impact factor: 5.103

7.  The Npro product of classical swine fever virus and bovine viral diarrhea virus uses a conserved mechanism to target interferon regulatory factor-3.

Authors:  Julian Seago; Louise Hilton; Elizabeth Reid; Virginie Doceul; Janan Jeyatheesan; Kartykayan Moganeradj; John McCauley; Bryan Charleston; Stephen Goodbourn
Journal:  J Gen Virol       Date:  2007-11       Impact factor: 3.891

8.  Mechanism of mda-5 Inhibition by paramyxovirus V proteins.

Authors:  K S Childs; J Andrejeva; R E Randall; S Goodbourn
Journal:  J Virol       Date:  2008-11-19       Impact factor: 5.103

9.  Generation of simian rotavirus reassortants with diverse VP4 genes using reverse genetics.

Authors:  Alexander Falkenhagen; Corinna Patzina-Mehling; Antje Rückner; Thomas W Vahlenkamp; Reimar Johne
Journal:  J Gen Virol       Date:  2019-12       Impact factor: 3.891

Review 10.  Interferon-stimulated genes and their antiviral effector functions.

Authors:  John W Schoggins; Charles M Rice
Journal:  Curr Opin Virol       Date:  2011-12       Impact factor: 7.090

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  13 in total

1.  Development of an entirely plasmid-based reverse genetics system for 12-segmented double-stranded RNA viruses.

Authors:  Ryotaro Nouda; Shohei Minami; Yuta Kanai; Takahiro Kawagishi; Jeffery A Nurdin; Moeko Yamasaki; Ryusei Kuwata; Hiroshi Shimoda; Ken Maeda; Takeshi Kobayashi
Journal:  Proc Natl Acad Sci U S A       Date:  2021-10-19       Impact factor: 11.205

2.  The Role of the VP4 Attachment Protein in Rotavirus Host Range Restriction in an In Vivo Suckling Mouse Model.

Authors:  Liliana Sánchez-Tacuba; Takahiro Kawagishi; Ningguo Feng; Baoming Jiang; Siyuan Ding; Harry B Greenberg
Journal:  J Virol       Date:  2022-07-12       Impact factor: 6.549

3.  Reverse Genetics Approach for Developing Rotavirus Vaccine Candidates Carrying VP4 and VP7 Genes Cloned from Clinical Isolates of Human Rotavirus.

Authors:  Yuta Kanai; Misa Onishi; Takahiro Kawagishi; Pimfhun Pannacha; Jeffery A Nurdin; Ryotaro Nouda; Moeko Yamasaki; Tina Lusiany; Pattara Khamrin; Shoko Okitsu; Satoshi Hayakawa; Hirotaka Ebina; Hiroshi Ushijima; Takeshi Kobayashi
Journal:  J Virol       Date:  2020-12-22       Impact factor: 5.103

Review 4.  Treading a HOSTile path: Mapping the dynamic landscape of host cell-rotavirus interactions to explore novel host-directed curative dimensions.

Authors:  Upayan Patra; Urbi Mukhopadhyay; Arpita Mukherjee; Shanta Dutta; Mamta Chawla-Sarkar
Journal:  Virulence       Date:  2021-12       Impact factor: 5.882

5.  Rescue of Infectious Rotavirus Reassortants by a Reverse Genetics System Is Restricted by the Receptor-Binding Region of VP4.

Authors:  Alexander Falkenhagen; Marno Huyzers; Alberdina A van Dijk; Reimar Johne
Journal:  Viruses       Date:  2021-02-25       Impact factor: 5.048

6.  m6A modifications regulate intestinal immunity and rotavirus infection.

Authors:  Anmin Wang; Wanyiin Tao; Jiyu Tong; Juanzi Gao; Jinghao Wang; Gaopeng Hou; Chen Qian; Guorong Zhang; Runzhi Li; Decai Wang; Xingxing Ren; Kaiguang Zhang; Siyuan Ding; Richard A Flavell; Huabing Li; Wen Pan; Shu Zhu
Journal:  Elife       Date:  2022-01-31       Impact factor: 8.140

7.  Rotavirus as an Expression Platform of Domains of the SARS-CoV-2 Spike Protein.

Authors:  Asha Ann Philip; John Thomas Patton
Journal:  Vaccines (Basel)       Date:  2021-05-03

Review 8.  Recent advances in rotavirus reverse genetics and its utilization in basic research and vaccine development.

Authors:  Tirth Uprety; Dan Wang; Feng Li
Journal:  Arch Virol       Date:  2021-07-03       Impact factor: 2.574

9.  Rotavirus as an Expression Platform of the SARS-CoV-2 Spike Protein.

Authors:  Asha A Philip; John T Patton
Journal:  bioRxiv       Date:  2021-02-18

Review 10.  Human Rotavirus Reverse Genetics Systems to Study Viral Replication and Pathogenesis.

Authors:  Satoshi Komoto; Saori Fukuda; Takayuki Murata; Koki Taniguchi
Journal:  Viruses       Date:  2021-09-08       Impact factor: 5.048

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