Literature DB >> 32755543

A minimal self-organisation model of the Golgi apparatus.

Quentin Vagne1, Jean-Patrick Vrel2,3, Pierre Sens2,3.   

Abstract

The design principles dictating the spatio-temporal organisation of eukaryotic cells, and in particular the mechanisms controlling the self-organisation and dynamics of membrane-bound organelles such as the Golgi apparatus, remain elusive. Although this organelle was discovered 120 years ago, such basic questions as whether vesicular transport through the Golgi occurs in an anterograde (from entry to exit) or retrograde fashion are still strongly debated. Here, we address these issues by studying a quantitative model of organelle dynamics that includes: de-novo compartment generation, inter-compartment vesicular exchange, and biochemical conversion of membrane components. We show that anterograde or retrograde vesicular transports are asymptotic behaviors of a much richer dynamical system. Indeed, the structure and composition of cellular compartments and the directionality of vesicular exchange are intimately linked. They are emergent properties that can be tuned by varying the relative rates of vesicle budding, fusion and biochemical conversion.
© 2020, Vagne et al.

Entities:  

Keywords:  golgi apparatus; none; organelles; physics of living systems; self-organization; stochastic models

Mesh:

Year:  2020        PMID: 32755543      PMCID: PMC7406241          DOI: 10.7554/eLife.47318

Source DB:  PubMed          Journal:  Elife        ISSN: 2050-084X            Impact factor:   8.140


  64 in total

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Review 2.  Lipid transfer proteins and the tuning of compartmental identity in the Golgi apparatus.

Authors:  Mark I McDermott; Carl J Mousley
Journal:  Chem Phys Lipids       Date:  2016-06-25       Impact factor: 3.329

3.  Evolution and diversity of the Golgi.

Authors:  Mary J Klute; Paul Melançon; Joel B Dacks
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-08-01       Impact factor: 10.005

4.  Sequential interactions with Sec23 control the direction of vesicle traffic.

Authors:  Christopher Lord; Deepali Bhandari; Shekar Menon; Majid Ghassemian; Deborah Nycz; Jesse Hay; Pradipta Ghosh; Susan Ferro-Novick
Journal:  Nature       Date:  2011-05-01       Impact factor: 49.962

5.  Nonequilibrium description of de novo biogenesis and transport through Golgi-like cisternae.

Authors:  Himani Sachdeva; Mustansir Barma; Madan Rao
Journal:  Sci Rep       Date:  2016-12-19       Impact factor: 4.379

6.  Knockout of the Golgi stacking proteins GRASP55 and GRASP65 impairs Golgi structure and function.

Authors:  Michael E Bekier; Leibin Wang; Jie Li; Haoran Huang; Danming Tang; Xiaoyan Zhang; Yanzhuang Wang
Journal:  Mol Biol Cell       Date:  2017-08-16       Impact factor: 4.138

7.  A sophisticated, differentiated Golgi in the ancestor of eukaryotes.

Authors:  Lael D Barlow; Eva Nývltová; Maria Aguilar; Jan Tachezy; Joel B Dacks
Journal:  BMC Biol       Date:  2018-03-07       Impact factor: 7.431

8.  A conceptual mathematical model of the dynamic self-organisation of distinct cellular organelles.

Authors:  Bernd Binder; Andrean Goede; Nikolaus Berndt; Hermann-Georg Holzhütter
Journal:  PLoS One       Date:  2009-12-30       Impact factor: 3.240

9.  The dynamics of engineered resident proteins in the mammalian Golgi complex relies on cisternal maturation.

Authors:  Riccardo Rizzo; Seetharaman Parashuraman; Peppino Mirabelli; Claudia Puri; John Lucocq; Alberto Luini
Journal:  J Cell Biol       Date:  2013-06-17       Impact factor: 10.539

10.  A model for the self-organization of vesicular flux and protein distributions in the Golgi apparatus.

Authors:  Iaroslav Ispolatov; Anne Müsch
Journal:  PLoS Comput Biol       Date:  2013-07-18       Impact factor: 4.475

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  1 in total

Review 1.  Supply chain logistics - the role of the Golgi complex in extracellular matrix production and maintenance.

Authors:  John Hellicar; Nicola L Stevenson; David J Stephens; Martin Lowe
Journal:  J Cell Sci       Date:  2022-01-13       Impact factor: 5.285

  1 in total

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