| Literature DB >> 32754031 |
Yirong Ren1,2, Chenguang Yang1, Hao Chen1, Dapeng Dai1, Yan Wang1, Huolan Zhu1, Fang Wang1,2.
Abstract
OBJECTIVES: To verify the accuracy of the International Warfarin Pharmacogenetics Consortium (IWPC) algorithm, identify the effects of genetic and clinical factors on warfarin stable dose, and to establish a new warfarin stable dose prediction algorithm for the elderly Han-Chinese population under the guidance of pharmacogenetics.Entities:
Keywords: algorithm; atrial fibrillation; elder Han-Chinese; genetic polymorphism; warfarin
Year: 2020 PMID: 32754031 PMCID: PMC7365937 DOI: 10.3389/fphar.2020.01014
Source DB: PubMed Journal: Front Pharmacol ISSN: 1663-9812 Impact factor: 5.810
Figure 1Predicted vs. actual warfarin stable dose verified by IWPC algorithm using data of the 544 whole patients.
Figure 2Predicted vs. actual warfarin stable dose verified by IWPC algorithm using data of patients under 65 years old.
Figure 3Predicted vs. actual warfarin stable dose verified by IWPC algorithm using data of patients above 65 years old.
Baseline data analysis of people over 65 years old.
| Factors | N (%) or mean ± SD |
|---|---|
| Age, y | 74.08 ± 6.30 |
| Smoking/not | 50 (13.89)/310 (86.11) |
| Amiodarone/not | 59 (16.39)/301 (83.61) |
| Statins/not | 85 (23.61)/275 (76.39) |
| Height, cm | 167.50 ± 8.65 |
| Weight, kg | 71.04 ± 12.38 |
| BSA, m2 | 1.78 ± 0.19 |
| Creatinine, µmol/L | 79.71 ± 17.31 |
| Warfarin dosage, mg/d | 3.10 ± 0.91 |
BSA, body surface area; Quantitative traits are presented as mean ± SD.
Comparison of stable warfarin dose in elder patients with clinical factors.
| Factors | Classification | Stable dose of warfarin (mg/d) |
|
|---|---|---|---|
| Sex | Male(232) | 3.19 ± 1.01 | 0.085 |
| Female(128) | 2.94 ± 0.68 | ||
| Age, y | 65-74 | 3.14 ± 0.95 | 0.385 |
| ≥75 | 3.05 ± 0.87 | ||
| Smoking | yes | 3.26 ± 1.33 | 0.927 |
| no | 3.08 ± 0.82 | ||
| Amiodarone | yes | 2.93 ± 0.77 | 0.103 |
| no | 3.14 ± 0.93 | ||
| Statins | yes | 2.99 ± 0.90 | 0.209 |
| no | 3.14 ± 0.91 | ||
| Creatinine | ≥130 | 2.14 ± 0.77 | 0.045 |
| <130 | 3.11 ± 0.91 |
Stable dose of warfarin are presented as mean±SD. P < 0.05 was considered statistically significant.
Pearson correlation analysis between height, weight, BSA with warfarin stable dose.
| r | R2 |
|
| |
|---|---|---|---|---|
| Weight (kg) | 0.141 | 0.058 | 2.627 | 0.007 |
| Height (cm) | 0.251 | 0.063 | 4.747 | <0.001 |
| BSA (m2) | 0.184 | 0.034 | 3.448 | <0.001 |
BSA, body surface area; P < 0.05 was considered statistically significant.
Distribution of CYP2C9 and VKORC1 genotypes.
| genotype | N (%) | |
|---|---|---|
|
| *1*1 | 334(92.78) |
| *1*3 | 25(6.94) | |
| *1*2 | 1(0.28) | |
|
| AA | 299(83.06) |
| GA | 58(16.11) | |
| GG | 3(0.83) |
Comparison of warfarin stable dose in patients with different genotypes.
| Gene | Warfarin dose (mg/d) | P |
|---|---|---|
|
| <0.001 | |
| *1*1 | 3.16±0.90 | |
| *1*3, *1*2 | 2.39±0.67 | |
|
| 0.046 | |
| AA | 3.0(3.0,3.0) | |
| GA, GG | 3.0(2.5,3.75) |
The warfarin stable dose in different VKORC1 genotypes are expressed as median (interquartile range). The stable dose of patients with different CYP2C9 genotypes are expressed as mean±SD. P < 0.05 was considered statistically significant.
Figure 4Effects of wild-type and mutant of CYP2C9 and VKORC1 on warfarin stable dose. Variance analysis of warfarin dose in different genotypes was represented by boxplot, and scatter was the true warfarin dose distribution of each patient with different genotypes.
Comparison of warfarin stable dose in patients with different genotypes combination.
| CYP2C9 | VKORC1 | N(%) | Warfarin dose (mg/d) | P |
|---|---|---|---|---|
| *1*1 | AA | 275(76.39) | 3.0(3.0,3.0) | <0.001 |
| GA, GG | 59(16.39) | 3.0(2.5,3.75) | ||
| *1*2, *1*3 | AA | 24(6.67) | 2.38(2.01,2.88) | |
| GA, GG | 2(0.56) | 2.0(2.0,2.0) |
The warfarin stable dose in different genotype combination are expressed as median (interquartile range). P < 0.05 was considered statistically significant.
Pearson correlation analysis between genotypes and warfarin dose.
| Genotype |
|
|
|
|
|---|---|---|---|---|
|
| -0.219 | 0.0480 | -4.502 | <0.001 |
|
| 0.139 | 0.0193 | 2.691 | 0.008 |
R2, determination coefficient; P < 0.05 was considered statistically significant.
Multivariate regression algorithm of population over 65 years.
| Factors |
|
|
|
|
|---|---|---|---|---|
| Constant term | 0.4578 | 0.0338 | 13.524 | <0.001 |
| Height | 0.2279 | 0.0564 | 4.041 | <0.001 |
| Creatinine | -0.1372 | 0.0611 | -2.245 | 0.0267 |
| Amiodarone | -0.0862 | 0.0250 | -3.444 | <0.001 |
|
| -0.1426 | 0.0274 | -5.191 | <0.001 |
|
| 0.0659 | 0.0220 | 2.991 | 0.0034 |
β is the coefficient in front of the independent factors; SE, standard error; P < 0.05 was considered statistically significant.
Figure 5Predicted vs. actual warfarin stable dose verified by the new algorithm and IWPC algorithm using data of the remaining 120 patients over 65years. This was a scatter plot of the correlation between the predicted value and the actual value. The red line was the fitting line, and the black line was the theoretical line where the actual value and the predicted value were equal.
Comparison of the two algorithms in different populations.
| Patients Groups | N | The Elderly algorithm | IWPC algorithm | ||||
|---|---|---|---|---|---|---|---|
| R2 | RMSE | 20%-p | R2 | RMSE | 20%-p | ||
| 120 cases of the validation group | 120 | 0.0125 | 0.9937 | 59.50% | 0.0021 | 1.2297 | 45.45% |
| the whole population | 544 | 0.1925 | 0.8613 | 66.91% | 0.1321 | 1.0137 | 55.15% |
| all patients above 65-year-old | 360 | 0.1510 | 0.8523 | 66.20% | 0.0822 | 1.0502 | 51.80% |
R2, determination coefficient; RMSE, root mean squared error; (20%-p), the proportion of the predicted value within the true value range.